KEGG   Rattus norvegicus (rat): 307740
Entry
307740            CDS       T01003                                 
Symbol
Sall1
Name
(RefSeq) sal-like protein 1
  KO
K19871  sal-like protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    307740 (Sall1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    307740 (Sall1)
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_jaz zf-met zf-C2H2_6 zf-C2HC_2 zf-C2H2_2 zf-Di19 IZUMO zf-C2HE zf-H2C2_5
Other DBs
NCBI-GeneID: 307740
NCBI-ProteinID: NP_001100885
RGD: 1309916
Ensembl: ENSRNOG00000013907
UniProt: D3ZIF4
Position
19:34179316..34196278
AA seq 1315 aa
MSRRKQAKPQHFQSDPEVASLPRRDGDTEKGQPSRPTKSKDAHVCGRCCAEFFELSDLLL
HKKSCTKNQLVLIVNESPASPPKTFPPGPPSLNNPDEQMKFVASKADQEDCGDLSEHKGL
DREESMETEVPVATSSSSSNGGTLSSVTNIATPSCHSGSSTGTSAITTSLPQLGDLTTLG
NFSVINSNVIIENLQSTKVAVAQFSQEARCGGASGGKLLISALMEQLLALQQQQIHQLQL
IEQIRHQILLLASQNADLSASSVPSQGTLRTSANPLTTLSSHLSQQLAVAAGLAQSLASQ
SANISGVKQLPPVQLPQSSSGTIIPPSSGPSPNVSMVTATVPTPSSEKVASNAGASHVSP
PAVSASSSPAAFAISSLLSPASNPLLPQPTPANAVFPTPLPNIATTAEDLNALSALAQQR
KSKPPNVTAFEAKSTSDEAFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRF
STKGNLKVHFQRHKEKYPHIQMNPYPVPEHLDNVPTSTGIPYGMSIPPEKPVTSWLDTKP
VLPTLTTSVGLPLPPTLPSLTPFIKTEEPAPIPISHSAASPQGSVKSDSGAPDLATRNPS
GVPEEAEGSAVPPFGGKGEDSSVVSSIPTAGSSALNSPVADGGAGGTTFTNPLLPLMSEQ
FKAKFPFGGLLDSAQASETSKLQQLVENIDKKATDPNECVICHRVLSCQSALKMHYRTHT
GERPFKCKICGRAFTTKGNLKTHYSVHRAMPPLRVQHSCPICQKKFTNAVVLQQHIRMHM
GGQIPNTPVPDNYPESMESDTGSFDEKNFDDLDNFSDENMEECPEGSIPDTPKSADASQD
SLSSSPLPLEMSSIAALENQMKMINAGLAEQLQASLKSVENGSVEGDVLTNDSSSVGGDV
ESQSSGSPAISESTSSMQALSPSNSTQEFHKSPNVEEKPQRVGPGEFANGLSPTPVNGGA
LDLTSSHAEKIIKEDSLGILFPFRDRGKFKNTACDICGKTFACQSALDIHYRSHTKERPF
ICTVCSRGFSTKGNLKQHMLTHQMRDLPSQLFEPSSNLGPNQNSAMIPASSLSSLIKTEV
NGFVHVSPQDSKDAPTSHVPSGPLSSSATSPVLLPALPRRTPKQHYCNTCGKTFSSSSAL
QIHERTHTGEKPFACTICGRAFTTKGNLKVHMGTHMWNSTPARRGRRLSVDGPMTFLGGN
PVKFPEMFQKDLAARSGSGDPSSFWNQYTAALSNGLAMKANEISVIQNGGIPPIPGSLGN
GSSSPISGLTGNVEKLGNSEPSAPLAGLEKMASSENGTNFRFTRFVEDSKEIVTS
NT seq 3948 nt   +upstreamnt  +downstreamnt
atgtcgcggaggaagcaagcgaagcctcaacatttccaatccgaccccgaagtggcctcg
ctcccccggcgagatggggacacagagaagggtcaaccaagtcgccccactaagagcaaa
gatgcccacgtctgtggccggtgctgcgctgaattctttgaattatcagaccttctgctc
cacaaaaagagctgcactaagaatcaattagttttgatcgtcaatgaaagtccagcctcc
ccaccaaaaaccttccctcccggcccgccgtctctcaacaatcctgatgagcaaatgaaa
ttcgtggcgagtaaagcagaccaagaagactgcggcgacctttcagaacacaagggactc
gacagggaagagtccatggagacggaggtcccagttgccaccagcagcagcagcagcaac
ggtggcactctgagcagtgtcaccaacatcgccaccccaagctgccacagcggctcttcc
acgggtacctcagcgatcacaacctctctacctcaacttggggacctgacgacactgggc
aacttctcggtgatcaacagcaacgtcatcattgaaaatctccagagcaccaaggtggcg
gtggcccagttctcccaggaagcgaggtgtgggggggcctctggaggcaagctgctcatc
tcggccctcatggagcagctcctagctctgcagcagcagcagatccaccagctgcagctc
atagaacagattcgtcaccaaatactgctgctggcttctcagaacgcagatctgtcagcc
tcttctgttccttctcaaggtactttacgaacgtctgccaaccccttgaccacactaagt
tcccatttgtctcagcagctggcggtggcagctggattagcacagagccttgctagccaa
tctgccaacatcagcggtgtgaagcagctccccccagtccagctacctcagagcagctcc
ggcaccatcatcccgcccagtagtggcccatctcccaacgtgagcatggtgacagcaaca
gttcccaccccgtcctcggaaaaagtggcttccaatgctggtgcctcccatgtcagcccc
ccggccgtctcagcatcatcctcaccagcagcattcgcaataagcagtctgttgagtcct
gcatctaacccacttctacctcagccgaccccagctaatgctgttttccctacccctttg
cctaacattgcgacaactgcagaagatttaaacgccctgtctgccttggcccagcaaaga
aaaagcaagccaccaaatgtcactgccttcgaagcaaagagtacttcagacgaggcattc
tttaaacacaagtgtaggttctgtgcaaaggtctttgggagtgacagtgccttgcagatc
cacttgcgctcccatactggagagaggccgttcaagtgcaacatctgtgggaacaggttc
tccaccaagggcaacctgaaagtccactttcagcgccacaaagagaagtacccccacatc
cagatgaacccctaccccgtaccggagcacttggacaacgtccctacgagcaccggcatc
ccctacggcatgtccatccctccagagaagccggtcaccagctggctagacaccaagccg
gtcctgcccactctgaccacttccgtcggcctgccattgcctcctaccctcccaagcctc
acgcccttcatcaagacggaagaaccagctcccatcccaattagccattctgctgccagc
ccccaaggctcagtcaaaagtgactcgggggcccccgatttggccacaagaaacccaagt
ggggtcccagaggaagccgaagggtctgctgtgccccccttcggtggcaagggtgaagac
agtagcgtggtaagctccatcccgacagcgggcagcagtgccctgaactccccagtggct
gatggtggtgcaggagggaccaccttcaccaaccctctgttgcccctcatgtctgagcag
ttcaaggccaagtttccttttgggggactcttagattcagcccaggcctcagagacatcc
aagctgcagcaactggtagaaaacattgacaagaaggccaccgaccccaacgagtgtgtc
atctgccatcgggttctgagctgtcagagcgctttgaaaatgcactaccgaacacacacc
ggggagaggcccttcaagtgtaagatctgcggccgggcttttaccacgaaagggaacctc
aagacccactacagcgtccatcgggctatgcccccactcagagtccagcattcctgcccc
atctgtcagaagaagttcacaaacgcagtggtcctccagcagcacatccgtatgcacatg
ggaggccagatcccgaacaccccggtccctgacaactaccccgagtccatggagtctgac
acaggctccttcgatgagaagaatttcgatgacttagacaacttctcagatgagaacatg
gaagagtgtcctgagggcagcatcccggatacgcccaagtcagctgacgcttcccaagac
agcctgtcgtcttcacctctgccactcgagatgtccagcatcgccgctttggaaaatcag
atgaagatgatcaacgctggcctggccgagcagctgcaggccagcctgaagtcggtggag
aacgggtcagtggaaggagatgtactgaccaatgactcatcctcagtgggtggggatgtg
gagagccagagttcgggcagcccagccatctcagagtctacctcttctatgcaggctctg
tccccatccaacagcacccaagagttccacaagtcacccaatgttgaggaaaagccacag
agagtggggccaggcgagtttgccaatggcctgtctcccaccccagtgaacggaggtgct
ttggacttgacctctagtcatgcagagaaaatcatcaaagaagattccctgggaatcctc
ttccctttcagagaccggggtaaatttaaaaacactgcttgtgacatttgtggcaaaacc
tttgcttgtcagagtgccttggacattcattacagaagtcataccaaagagagaccgttc
atttgcacagtttgcagtcgtggcttttccacaaaggggaatttgaagcagcacatgttg
acacatcagatgcgagatctgccatcgcagctctttgagcccagttccaacctcggcccc
aatcagaactctgcgatgattcccgccagctcgttgtcatctctcatcaaaacagaggtc
aacggctttgtgcacgtttctcctcaggacagtaaggatgcccccactagtcatgtccct
tcggggcctctgtcatcctctgcgacatccccggttctgctcccagctctgccccggaga
acccccaaacagcactattgtaacacatgtggtaaaaccttctcttcctcgagtgccctg
cagatccacgagagaactcacactggagagaagccctttgcttgcactatctgtggaaga
gcattcacaacgaaaggcaatctgaaggtccacatgggcactcatatgtggaacagtacc
cctgcacgccggggccgccggctctcagtggatggccccatgacatttctaggagggaat
cctgtcaagttcccagaaatgttccagaaggatctggcggcgaggtcaggaagcggggat
ccgtccagcttttggaaccagtatacagcagcactgtccaacgggctggccatgaaggcc
aacgagatctctgtcattcagaatggtggcatccctccaattcctggaagcctgggcaac
gggagcagctcacctatcagcgggctgacagggaacgtggaaaagctggggaattcggaa
cccagtgctcccctggctggtctggagaaaatggcgagcagcgagaacggaaccaacttc
cgtttcacccgcttcgtggaggacagcaaagagatcgtcacgagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (12)   
   Pfam (12)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system