KEGG   Rattus norvegicus (rat): 307774
Entry
307774            CDS       T01003                                 
Symbol
Otud4
Name
(RefSeq) OTU domain-containing protein 4
  KO
K13718  OTU domain-containing protein 4 [EC:3.4.19.12]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    307774 (Otud4)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     307774 (Otud4)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C85
   307774 (Otud4)
SSDB
Motif
Pfam: OTU Peptidase_C65
Other DBs
NCBI-GeneID: 307774
NCBI-ProteinID: NP_001178629
RGD: 1305606
Ensembl: ENSRNOG00000018477
Position
19:complement(45141043..45184136)
AA seq 1105 aa
MEAAVGAPDGVDQGGAGPLEDATPMDAYLRKLGLYRKLVAKDGSCLFRAVAEQVLHSQSR
HVEVRMACIRYLRDNREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMYRKDFVIY
QEPNVSPSHVTENNFPEKVLLCFSNGNHYDIVYPITYRDSSAVCQSLLYELLYEKVFKTD
VSKIMMGLETSEVADESNSEISDSEDDSCKSKSTAATDVNGFKSSGSENPKNHGNSADLP
LSRKVLKSLSPAVYRNVEYEIWLKSKQAQQKRDYSIAAGLQYEGGERCHVRLDHNGKLSN
ADIHGVHSENGPVLSEELGKKQTPKNLKPPPPESWNTVSGKKMKKPNSGQNFHSDTDYRG
PKNLNKPIKAPSALPPRLQHPPAGVRQHALSSHSTGPQSQKSSSEHKNLSRVPSQITRKP
DRERAEDFDHVSRESYYFGLSPEERREKQAIEESRLLYEIQNRDEQAFPALSSSSVSQSP
QNSNACVPRKSSHARDRKGSMRRVDAEERKDKDSLRGHTHMDKKPEPSTLEISDDKCTRV
SSPSKSKKECPSPVEQKPAEHIPLSNPAPLLVSPEVHLTPAVPSLPATVPAWPSEPTTFG
PTGVPAQIPILSVTQTTGPDAAVSQAHLTPSPVPVSIQAVNQPLMPLPQTMSLYQDPLYP
GFPCSEKGDRAIAPPYSLCQTGEDLPKDKNILRFFFNLGVKAYSCPMWAPHSYLYPLHQA
YMAACRVYPKVPVPVYPQSTWFQEAPPAQSESDCPCADAHYSMHPEASVNGQMPQAEIGP
PAFSSPLVIPPSQVSEGHGQLSYQPELESESPGQLLHAEYEESLSGKNMYPQQSFGPNPF
LGPVPIAPPFFPHVWYGYPFQGFVENPVMRQNIVLPPDDKGELDLPLENLDLSKECDSVS
AVDEFPEARVEGAHSLSEASVSSKHEGRVEQSSQTRKADIDLSSGSSGVEGKAHPPTQIL
NREREAVSAEPEPKRTIQSLKEKPEKVKDPKTAADVLSSGANSVDRLQRPKEESSEDENE
VSNILRSGRSKQFYNQTYGSRKYKSDWGSSGRGGYQHVRGEESWKGQPNRSRDEGYQYHR
HVRGRPYRGDRRRSGMGDGHRGQHT
NT seq 3318 nt   +upstreamnt  +downstreamnt
atggaggcagctgtcggcgcgcccgacggcgtggaccagggcggcgcgggaccgctggag
gatgcgacgcccatggacgcctatctgcgcaagctgggattgtatcggaaattggtcgcc
aaggacgggtcgtgcttgttccgggctgtggccgagcaggtattacactctcagtctcga
catgtggaagttagaatggcttgtattcgctaccttcgagataacagagagaaatttgaa
gcgtttatagaagggtcatttgaagaatatttaaaacgtttggaaaacccacaggaatgg
gtaggacaagtggagataagcgccctctctcttatgtacaggaaagattttgtaatatat
caggagccaaatgtttctccttcgcatgtaactgaaaataattttcctgagaaggtgtta
ctgtgcttttcgaatggaaatcattatgacattgtctatcctataacatacagagatagt
tctgctgtgtgtcagtctctcctttatgaattgctgtatgagaaggtatttaaaactgac
gtcagtaaaatcatgatgggactagaaacttctgaagtggctgatgaaagcaacagtgaa
atatcagattctgaggatgacagttgcaagagtaaaagcactgctgctactgatgtgaat
ggatttaagtcctcaggcagtgagaaccctaagaaccatgggaactcagctgaccttcct
ttgtccagaaaggttcttaagtccctcagcccagcagtctatagaaatgtggagtatgaa
atttggttgaagtctaagcaagctcaacaaaaacgtgattattccattgctgctggctta
caatatgaaggaggagagagatgccatgttagattggatcataatgggaagttatctaat
gcagacattcatggggttcactctgagaatggaccggttttgtctgaagaactggggaaa
aagcaaacaccgaagaacctcaagccacctcccccagaaagctggaacacggtgtccgga
aagaagatgaaaaaacctaattctgggcaaaatttccattcagatacggattacagaggg
ccaaagaatctaaacaagccaatcaaagccccgtctgcactacctcctcgcctgcagcat
cctccagcgggtgtaaggcagcacgcgctctccagtcattctacggggccccagtctcag
aaatcctccagtgagcataagaatctaagtcgggtgccatcacagatcacaagaaaacct
gatcgtgaaagagctgaggactttgatcatgtgagtcgtgaatcttactattttggcctc
tcgccagaagaacgcagagagaagcaagctattgaagagtctcggctactctatgagatt
cagaaccgggatgaacaggcttttccggctctttctagttcatcagtcagtcagtcacct
cagaatagcaacgcgtgcgtcccaaggaagtcttcacatgcgagggacaggaaaggaagc
atgcggagagtagatgcagaggaacggaaggacaaagactctctacgtggccatactcac
atggataaaaaacccgagccaagcacactggagatcagcgatgataaatgtacaagagtt
tcatcaccatctaagtcaaagaaagagtgcccatctcctgtagaacaaaagccagcagaa
catatacctttgtcaaatccagcccccctcctagtctctccagaagttcatctcactcct
gcggtgccttctttaccagccactgtgccagcctggccaagtgaacccacaactttcgga
ccaacaggtgtccctgctcagattcccattttgtcagtgacacagaccactggacctgat
gctgccgtgtcacaagcgcatttaacaccctctccggttcctgtgtcaattcaggcagtt
aaccagcccttgatgcctttgcctcagacaatgagcctctatcaagacccactctatcct
gggtttccttgtagtgagaagggagatcgagccattgcaccaccctattcactgtgtcag
accggcgaggacctgcctaaagataagaatattcttcgattcttcttcaatcttggtgta
aaggcatatagttgccctatgtgggccccacactcttacctgtatcctctgcaccaggcg
tacatggcagcctgcagggtgtacccaaaggtccctgttcctgtgtatcctcagagtact
tggttccaagaagcccctcctgctcagagtgaaagtgactgcccctgtgctgacgcccac
tactctatgcaccctgaggccagtgttaatggccagatgccacaggcagagatcggacca
cctgcgttttcttcccctctggttatccctccatctcaggtgtctgaaggtcatggacag
ttgtcttaccaacctgaactggagtctgagagcccagggcagcttcttcacgctgagtat
gaagagtcacttagcggcaagaacatgtacccacagcagtcctttgggcctaatccattc
ttaggtcctgttcccattgcacctcctttcttccctcatgtttggtatgggtatcctttt
cagggatttgtggaaaatcctgtaatgaggcaaaatattgtcctgccccctgatgataaa
ggagagttggatttgcctttggaaaatctagatctgtctaaagagtgcgattctgtctca
gcagtagacgagttcccagaagccagagttgaaggcgcacattctctctctgaagcaagt
gtgagcagcaagcatgaaggccgggtggagcagtcgtcccagacgcggaaggcagacata
gacttgtcttcaggttcttctggagtggagggaaaggctcacccccctactcagattcta
aaccgagagagagaggctgtgtctgctgaacctgagcctaagaggaccattcaaagtctg
aaagaaaaaccagagaaagtcaaagaccccaagactgctgccgatgtgctcagctctggg
gccaactctgtggatagattgcaaagaccaaaagaagagagttcagaagatgagaacgaa
gtgtctaatattttgagaagtggcagatccaagcagttttataatcaaacttatggaagc
aggaagtacaaaagtgattggggctcttctggtagaggtggctatcaacatgtgagaggc
gaggagtcctggaaagggcagcctaacagaagccgggatgaaggttatcagtaccatcga
catgttagaggacgcccttacaggggagataggaggaggtcagggatgggagatggccac
aggggacaacacacttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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