KEGG   Rattus norvegicus (rat): 308000
Entry
308000            CDS       T01003                                 
Symbol
Pdzd8
Name
(RefSeq) PDZ domain-containing protein 8
  KO
K24060  PDZ domain-containing protein 8
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    308000 (Pdzd8)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   308000 (Pdzd8)
SSDB
Motif
Pfam: PDZ_6 C1_1 PDZ PDZ_2 GRASP55_65
Other DBs
NCBI-GeneID: 308000
NCBI-ProteinID: NP_001100916
RGD: 1308622
Ensembl: ENSRNOG00000009460
UniProt: D3ZXY2 A6JI84
Position
1:complement(268435304..268492923)
AA seq 1152 aa
MGLLLMILASAVLGSFLTLLTQFLLLYRRQPEPRADEAARAGDGFRYLKPVPGLPLREYL
YGGGAEEPAAGSSEAGASTTPTPDSPAPPTLETCYFLNATILFLFRELRDTALARRWVTK
KIKVEFEELLQTKTAGRLLEGLSLRDVFLGDTVPYIKTIRLVRPVVASGTGEPDEPDGDA
LPATCPEELAFEAEVEYNGGFHLAIDVDLVFGKSAYLFVKLSRVVGRLRFVLTRVPFTHW
FFSFVEDPLIDFEVRSQFEGRPMPQLTSIIVNQLKKIIKRKHTLPSYKIRFKPFFPYQAL
QGFEEDEDLIHIQQWALTEGRLKVTLLECSRLLIFGSYEREANVHCTLELSSGVWEEKQR
SSIKTVELIKGNLQSVGLTLRLVQSTDGYAGHVIIETVAPNSPAAIADLQRGDRLIAIGG
VKITSTLQVLKLIKQAGDRVLVYYQRPVGQSNQGAMLQDSLGQLEENFLSSSCQPGYEEE
AAGLPVDSETRDLDSEFEDLAGDVRVQTELKEETQPLSHSPKRTPTTLSIKPLGAISPVL
NRKLISGIHPPPQKLPSKEGNKPSTLKTSEATEAAQVSKPQVPTFKPPVPPRPQGRVPLP
PTDTSAQADPETTEKPEKVLLPPPPADKPAEKQVKSVDHGEDVAAGKQPPAKQEVVKDAP
SESSAPTKDPSDDHQMWESSEVLYRNKVGKWSRARASCVFDIEACHRYLNIALWCRDPFK
LGGLICLGHASLKLEEVALGCLATSNMEYLSKFRLEPPAPKAMVTRTALRNLSMQKGFND
KFCFGDITIHFKYLKEGEPDHQIVPSVEKERELHVVEEVSTLPKEDHFVGQMSLSENKHS
FQDTQFQNPTWCDYCKKKVWTKAASQCMFCAYVCHKKCQEKCLAETPLCGATERRVDRTL
KSLRLEGQDPLLGLPPRVEMEANKSVNKTTGLTRHIINTSSRLLNLRQVSKTRLAEPGTD
LVEPSPKHTPNTSDNEGSDTEVCGPNSPSKRGNSAGIKLTRKEGGLDDSVFIAVKEIGRD
LYRGLPTEERIQKLEFMLDKLQNEIDQELEHNNSLVREEKETNDTRKKSVLSASLAKSGE
RLQALTLLMIHYKAGIEDIETLENLSLDQHSKKMNKYTEDTEEDLDSEISQLIDSQPFSN
ISDDLFGPSESV
NT seq 3459 nt   +upstreamnt  +downstreamnt
atggggctgctgctcatgatcttggcgtcggccgtgctgggctcgttcctcacgctgctc
acacagttcctgctgctctaccgcagacagcccgaaccgcgggcagacgaggcagcccgc
gcgggcgacggcttccgctaccttaagccggtgccgggcctgcccctcagggagtacctc
tatggcggcggcgccgaggagcccgctgctgggtcctccgaggccggcgccagcacgaca
ccgacccccgacagcccggccccgccgacgctggagacctgctacttcctcaacgccacc
atcctgttcctgttccgggagctgcgggacaccgcgctcgcccgccgctgggtcaccaag
aagatcaaggtggagttcgaggagctgctgcagaccaagacggccggccgcctgctggag
gggctgagcctgcgcgacgtgttcctgggtgacaccgtgccctacatcaagaccatccgg
ctggtgcggcccgtggtggcttcgggcaccggcgagcccgacgaacccgacggggacgct
ctgcccgccacctgcccggaggagctggcctttgaggcggaggtggagtacaacggcggc
ttccacctggccatcgacgtggatctagtgttcggcaagtccgcctacctgttcgtgaag
ctgtcgcgcgtggtgggtaggctgcgcttcgtcctcacccgcgtgcccttcacccactgg
ttcttctccttcgtggaggacccgctgattgacttcgaggtgcgctcccagttcgagggg
cggcccatgccccagctcacctccatcatcgtcaaccagctgaagaagatcatcaagcgc
aagcacaccctgcccagttacaagatcaggtttaagccgttttttccataccaagccttg
caaggatttgaagaagatgaagatcttatccatattcaacaatgggcacttactgagggc
cggcttaaagttacattgctagaatgtagcaggttactcatttttggatcctatgagaga
gaagcaaatgttcattgcacacttgagctaagcagtggtgtttgggaagaaaaacaaagg
agttctattaagacggttgaattaataaaagggaatttacaaagtgtcggacttacactt
cgtcttgttcagtcaactgatggctatgctgggcatgtcataattgaaaccgtggcccca
aactcacctgctgccattgcagatcttcagcggggagatcggctcattgctattggaggt
gtgaaaatcacatcgacactgcaagtgttaaaactcatcaagcaggccggcgaccgcgtg
ctggtgtactaccagaggcctgttgggcagagtaaccaaggggccatgctgcaagatagt
ctgggccagctggaagaaaactttttgtcaagctcctgccagccaggttatgaagaggaa
gctgctggattgccagtggatagtgagactagagatctagattccgaatttgaagacttg
gcaggtgatgtcagagtacaaacagagttgaaagaggagacacaaccgttgagtcacagt
cccaaacgtactccaacaacactttctattaaaccccttggcgctatatccccagtttta
aatcgtaaattaatttcaggaatccacccaccaccacaaaaacttccatccaaagaagga
aataaaccatcaactctaaaaacttcagaggccacagaagcagcacaagtgtccaaaccc
caagtacccactttcaaaccacctgtgcccccacgaccacaggggagagtgcctctgcct
cccactgacacctcagctcaggcagacccggaaaccacagaaaagccagagaaggtgctg
ctccctcctcctcctgcagataaacccgctgagaagcaagtgaagagtgtggatcacgga
gaagatgtggcagcaggtaagcagcctccagcaaagcaggaagtagtgaaagatgctcct
tcagagagttctgctcccactaaagacccttcagatgaccatcagatgtgggaatcgtca
gaggttctgtatcgtaataaggtaggaaagtggtcaagagccagagcatcttgtgtgttc
gacatagaagcctgccacaggtacctgaacattgcactgtggtgcagggatccgttcaag
ttaggaggtctcatctgtttggggcatgctagtttaaaactggaggaggtggctttagga
tgcctagctacatcaaacatggaatacctttcaaagttcagactggagcctcctgcacct
aaggccatggtcacgagaactgcactgcgtaatctgagtatgcagaagggcttcaatgac
aagttttgttttggtgacattactattcatttcaagtatttgaaggaaggagaaccagac
caccagatagttcctagtgtagagaaagaaagagaactccatgtggttgaggaagtttct
acactccctaaagaggaccattttgtgggacagatgagtttgtcagaaaataaacatagt
tttcaagatactcagttccaaaacccaacttggtgtgattactgtaagaaaaaggtgtgg
acaaaagctgcttcccaatgtatgttctgtgcttatgtctgtcataaaaaatgtcaggaa
aagtgtctagctgagacgcctctttgtggagcgactgagaggcgagtagaccggaccctg
aaaagcctcaggctggaaggacaggacccactcttgggccttcctcctcgtgtggagatg
gaagctaacaagtcagtcaataaaacaacagggttgacaaggcatatcattaacactagc
tctcgcttactgaatctgcgtcaagtctctaaaacccgccttgctgaaccaggaacagat
cttgtagaaccatcaccaaaacacacacccaatacgtcagacaatgaaggcagtgacaca
gaggtctgtggtccaaacagtccttccaaacgaggaaacagtgcaggaataaagttaacg
agaaaggaaggagggctggatgacagtgtttttattgcagttaaagaaattggccgtgat
ctatacagaggcttgcccaccgaagagaggattcagaagctagagttcatgttggataag
ctgcagaatgaaatcgatcaagagctggaacacaacaattccctcgttagagaagaaaaa
gaaacaaatgatacaaggaagaaatcagttctttccgcttctttggctaaatcaggagaa
agactacaagctctgacacttctgatgatccactacaaagcaggcattgaagatattgaa
accttagaaaacctgtccctagaccagcattcgaaaaagatgaacaaatacacagaagac
acagaagaagacctcgacagtgagataagccagttgatagactctcagccattcagcaac
atctctgatgacttgttcggcccatctgagtcagtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (47)   

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