KEGG   Rattus norvegicus (rat): 308108
Entry
308108            CDS       T01003                                 
Symbol
Zfp541
Name
(RefSeq) zinc finger protein 541
  KO
K26584  zinc finger protein 541
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    308108 (Zfp541)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    MiDAC complex
     308108 (Zfp541)
SSDB
Motif
Pfam: zf-C2H2 ELM2 zf-C2H2_4 zf-C2H2_6 zf-H2C2_2 Myb_DNA-binding zf-C2H2_jaz FYVE
Other DBs
NCBI-GeneID: 308108
NCBI-ProteinID: NP_001100928
RGD: 1310756
Ensembl: ENSRNOG00000021800
Position
1:85878329..85914754
AA seq 1301 aa
MEPYSLGEEGPLPSEGHLPSFSESQGLNCSDTLNRDLGPSTRDLLYAGLSGLDLDPSLST
SDMPSEVLEDNLDTLSLYSGKDSDSVKLLEEYADSESQTSLQDLGLGTLKVPKEADEGGR
ATGSTRKGKRQHSSPQNPLLDCSLCGKVFSSASSLSKHYLTHSQERKHVCKVCSKAFKRQ
DHLTGHMLTHQKTKPFVCIEQGCSKSYCDYRSLRRHYEVQHGVCILKEAPPEEESYGDPT
HNHDVANQPPPSGLRSLGPPEARSPGSVLPNRDLLRCIVSSIVHQKIPSPGPAVGSSDTE
ARSSACACPTSLGSSSCTPASTPVAPGTLGSEIPEETHPPRKEAATEMFTAVQSRAAENS
APDPPESELESESPRLQRPSSLEGWPEGSSLPACLPLFRGHSVPSGSQPSSHNFQWLRNL
PSCPKNKSSNVFMVHKPSAVASREGSEGGSGPSSTPTSVEPSPSLGTSQEDLLPFPPALL
KAPGEASSEVRQVAGEDETWAPKKCKPDCESFPWQSPTELGLQDAQNPGGLPSDATPLFR
QLFMKSQESLVSHEQMQVLQMIAKSQRIFSHTQVATAAAQRPGPEGKQSTLKPLQGPWPP
QTLPPVPTVDSFQIGPGHSEPEGSPVRRRKTMPAVSRETSPGGPRRDTKGGPKVASAPPS
LTGPALHPSRNPDNSSLAKGTLDLGDIIPSAGSRQSQLGGDEPSGTQLVGKQGQGENGLA
SGAMRGEKGPACPRGGGYRLFSGHPRAQRFSGFRKEKVKMDVCCAASPSQVAMASFSSAG
PLADPPRDMKSKLTIFNRIQGGNIYRLPHPVKEESLAGGCHQPNGTPTDWMESKSTFVCK
NCSQMFYTEKGLSSHMCFHSDQWPSPRGKQEQQGQEKDGEERDSKESSQYRKRKKRPQPK
ALFAPPAPSALGEPGPGGCHQSCLRSPVFLVDHLLKGLFQCSPYTPPPMLSPIREGSGLY
FNTLCSTSRAGPHLVSPVLDQVDGSFGICVVKDDTKISIEPHINVGSRFQAEIPELQERP
LTRVDENVASLVWKPWGDVMTNPETQDRVMELCNVACSSVMPGGGTNLELALHCLHDAQG
SVQVALETLLLRGPQKPRTHPLADYRYTGSDIWTPMEKRLFKKAFCAHKKDFYLIHKTIQ
TKSVAQCVEYYYIWKKMVKFDCGRAPGLEKRGRRELDEVERTEDKVTCSPRERPTHRPTP
ELKIKTKSYRRESILHSSPSAAPKRTPEPPGSVESQGVFPCRECERVFDKIKSRNAHMKR
HRLQEHVEPVRVKWPVKPYPLKEEEEEEEEELGADMGPLQW
NT seq 3906 nt   +upstreamnt  +downstreamnt
atggagccatacagtcttggagaagagggaccacttccatcagaagggcacctcccatcc
ttctctgagagtcaagggctcaactgcagtgacacactcaaccgggacctgggccccagc
acacgggacctgctctatgctggcttaagcggtttggaccttgaccccagtctctccaca
tcagatatgcccagtgaagtgctggaggacaatctggataccctgtccctatactcaggg
aaggacagtgactctgtgaagctgctggaagagtatgcggactccgaatcacagacctcc
ttacaagacctggggctgggcacactcaaggtgcctaaagaggctgatgaaggaggcagg
gccactgggagtacaaggaaaggcaagcggcagcacagttcccctcagaatccactcctg
gactgcagcctgtgcgggaaagtgttcagcagtgccagttccctgagcaagcattacctg
acgcacagccaggagaggaaacacgtgtgcaaagtctgcagcaaggccttcaagcggcag
gaccacctgactgggcacatgctcacccaccagaagaccaagccctttgtgtgcattgag
cagggttgcagcaagagctactgtgactaccgctcactgcgccgccactatgaagtccag
catggagtatgcatcctgaaggaggctccaccagaagaggagtcctatggggacccaacc
cacaaccatgatgtggccaaccagcctccacccagtggcttgaggtccctggggccccca
gaagctaggtccccaggctctgtcttgcccaaccgagacctcctccgctgtattgtgagt
agcatcgtccaccagaagattccttctcctggcccagcagtggggtcttctgatactgaa
gcaaggagctcagcctgtgcctgccccacctcattggggtcatcatcatgtacaccggcc
agcaccccagtggccccaggaaccctgggctctgagattcctgaggaaactcatccccca
cgaaaggaagctgccactgaaatgttcacagctgtccagtcaagagcagctgagaacagt
gcccctgatccaccagagtcagagttagagtcagagtctccacgacttcaacggccatcc
tctctggagggctggccagagggcagctccctgcctgcctgcctgcctctctttagaggc
cactctgtcccctcaggatcccagccttccagccacaacttccagtggctccggaacctg
cccagctgtcccaagaacaaaagcagcaatgtgtttatggtccacaagccctctgcagtg
gcatcccgggagggctctgaggggggctctgggcccagcagtaccccgacctcagtggag
ccttcacccagcctgggcaccagccaggaggacctgctgccatttcctcctgcactccta
aaggcccctggtgaggcctccagtgaagtccggcaggtagctggggaagatgaaacctgg
gctcccaaaaagtgcaaacccgactgtgagtcattcccatggcagagccccactgagcta
gggctccaagatgcacagaacccaggtggactcccctcagatgccacacccctcttccgg
cagcttttcatgaagtcacaggagtctctggtaagccatgagcagatgcaggtgctccaa
atgattgccaagtcccagcggatcttctcccatacccaggtggctacagccgcagcccag
agaccagggcctgagggcaagcagtccactctgaagccattgcaggggccatggccacca
caaactctgccaccagtacccactgtagactctttccagataggccctggacactcagaa
ccagagggatccccagtccgcaggaggaaaaccatgcctgcagtgtccagagaaacatct
cctgggggccctaggcgagacacaaaaggaggccccaaagtggcctctgcaccaccatcc
ctcacagggccagctctgcacccctcccggaatccagacaactcttccttggccaaaggg
accttggacctgggagacattatccccagtgccggctcaaggcagtcccagttaggtgga
gatgagccatctggaacccagctggttgggaaacaggggcaaggagagaatggcctggct
tcaggggccatgagaggtgagaagggcccagcctgcccccgaggtggaggctacaggctc
ttctcagggcaccccagggcccagagattctcaggtttccggaaggagaaagtaaagatg
gatgtgtgctgtgcagcttctcccagccaagtggccatggcctccttctcatcagccggg
cccctggcagatccacccagagacatgaagtccaagctgacaatcttcaacagaatccag
ggtggaaacatctacagactcccccatccagtgaaggaagagagcttggcaggcggatgc
catcagccaaatgggactcccacagattggatggagtcaaagagcacttttgtgtgcaag
aattgcagccagatgttttacacagagaaagggctgagcagccacatgtgtttccatagt
gaccagtggccatcacctcgagggaagcaggagcaacagggacaagaaaaagacggggaa
gagagagacagcaaggagagcagccaatacagaaagaggaagaagcggccccagcccaag
gccctgtttgcccctcctgcaccctctgcccttggggagccaggcccaggagggtgccac
cagagctgcctacgctctcctgtgttcctggtggaccacctcctcaagggcttgtttcag
tgttctccctacacaccaccacctatgcttagcccaattcgtgagggctccgggctgtac
ttcaatacactctgctccacatccagggctgggccccaccttgtcagccctgtacttgac
caagtggacggctcctttggcatctgtgtggtgaaggatgacactaaaatcagcatcgaa
ccacatatcaacgtaggaagcagatttcaggcggagatcccagaactgcaagagaggccg
ctgaccagagtagatgagaatgtagcttctctggtctggaagccatggggagatgtgatg
accaatccagagacccaggacagagtgatggaactctgcaatgtagcatgctccagtgtg
atgccaggagggggcaccaacctggagcttgccctgcactgcctgcatgacgcccagggc
agtgttcaggttgccctggagactctgttactcagaggaccccagaagccccggactcac
ccgctggctgactatcgctatacagggtcagacatctggacccccatggagaagaggctc
ttcaagaaggcattctgtgcccacaagaaggacttttacctgatacataagacgatccag
actaaaagtgtagcacagtgtgttgagtactactacatctggaaaaaaatggttaagttt
gactgtggccgagctcctgggctggagaagaggggcagaagagagctggatgaggtagaa
aggactgaagacaaggtgacttgcagccctcgagaaagacccacccaccgtccaactcct
gaattaaagataaagaccaagagttacaggagggagtctatccttcactccagcccaagt
gcagcccccaagcgcactcctgagcctccagggagtgtggagagccagggcgtgttccct
tgcagagagtgtgagagggtgtttgacaagatcaagagtcggaatgcccacatgaagcgc
caccgcctccaggagcatgtggaacccgttagggtgaagtggcctgtgaagccctaccca
ctgaaggaggaagaggaagaagaggaagaagagctgggggccgacatgggtcccctgcag
tggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (8)   
   Pfam (8)   
All databases (31)   

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