KEGG   Rattus norvegicus (rat): 308282
Entry
308282            CDS       T01003                                 
Symbol
Shprh
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
  KO
K15710  E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.- 2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    308282 (Shprh)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     308282 (Shprh)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    308282 (Shprh)
SSDB
Motif
Pfam: SNF2-rel_dom SHPRH_helical-1st SHPRH_helical-2nd Linker_histone Helicase_C zf-RING_UBOX PHD zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_2 PEP-utilisers_N
Other DBs
NCBI-GeneID: 308282
NCBI-ProteinID: NP_001100940
RGD: 1310342
Ensembl: ENSRNOG00000014450
UniProt: A6JP42 D4A9B2
Position
1:7349073..7422804
AA seq 1701 aa
MSSRRKRAPPMKVDEERQQQLRWNMHEDLRNEPLSLTEEERACWDADSSDCIIIDDDPPE
GAAHRDKKRCTESVSILNSTEKETPLSVALNVTISPHPSDDSWKAFLGDFVLQLLPEESL
VEHFSERTFTLMSSESSSQLLIYVHSECNNVEKEENVLKGPASIYGKGIRVESSFSSDML
QDLAWLQKRRGIKLYQRPEGTHTIKVRIYLLEAGLTRLDFMSDAGSRMKKFNQLLKRVMG
KLYSLSIPDVLEEDEEESESEPEGQDIDELYQFVKRTHQQEAKSVQVDVQHPALIPVLRP
YQREAVNWMLQQEQFRSTPADNSLHFLWREIVTPDGLNLYYNPYTGCIIRDFPHAGPQLL
GGILADEMGLGKTVEVLALILTHTRQDVRQDALTLPEGKVVNYFIPTHCPRGKVKSREIQ
NTECEPKEKVHCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSTFRYDVQRNRSLLKRML
KCLIFEGLVKQIKGRGFSGTFTLGKNYKEDVFDKTKKQAVGSPQKIEKELRKSVNKDTDS
EYMPSDIYDDDNDNDDDDDDDPYYYYCKARKSRKLKKKPVLLTKKEKGQPVNLDSQVEAP
AAGDCASADAHVSESTCVSENRQIQDAEDCVESPSPAAMELAQSNTASFCETPDYRFECI
CGEFDQIGRKPRVQCLKCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVSTRATLIIS
PSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYV
DIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGIN
RWCVSGTPVQRGLEDLFGLVVFLGIEPYCVKHWWIRLLYHPYCKKNPQHLYSFIAKIMWR
SAKKDVIDQIQIPPQTEEMHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLSSL
DRRTVSSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAHRQ
LVCALNGLAGIHIIKGRRAQYRAALALPPPECVILSEYALAAELYREVLRSSEEHKGKLK
TDSLQRLHATHNLMELLVAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALQ
PVQQSIRELQRKVHSGSPWWLNVVHRAMEYAVDEELVQRVRNEISSNYKHQTDKLSMSEK
FRDCRGLQFLLTTQMEELHKFQKLVREAVKKLEKPPSRDVIESATVCHLRPARLPLNCCV
FCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRVPTTTRGLWAVSETERSMK
AILSFARSHRFDVEYIDEGSVSMDLFEAWKKEYKLLHEYWMTLRNRVSAVDELAMATERL
RVRHPKEPKPNPPVHHIIEPHEVEQNRIKLVNDKAVATSQLQKKLGQLLYLTNLEKSQDK
TSGGINPEPCPICARQLGKQWAVLTCGHCFCNECTSIIIEQYSVGSHRSSIKCAICRQTT
SHKEVSYVFTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLKDPGAKALVFSTWQDVLD
IISKALTDNNMGFTQISRIKTFQENLSAFKYDPQINILLLPLHTGSNGLTIIEATHVLLV
EPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAERSHTSSSGKHSE
ASALTVADLADLFTKESEELE
NT seq 5106 nt   +upstreamnt  +downstreamnt
atgagtagccgaaggaaacgtgctcccccgatgaaggtggatgaagaaaggcagcagcag
cttcgctggaacatgcacgaggacctgaggaatgagccgctcagcttgactgaggaagag
cgggcctgctgggatgcagactcctccgattgcatcatcatagatgatgaccctcccgaa
ggtgcagctcacagagataagaagaggtgtacagagtctgtgagcatcttaaactccact
gaaaaagagacccctctgtccgtggccttgaatgttaccatttctccccatccttccgat
gattcttggaaagcgtttctgggagattttgtgcttcagcttctccctgaagagagttta
gttgaacatttttctgaaaggacttttacgttgatgagttcagagtcaagcagtcagctc
ctgatctatgttcattcagaatgtaacaatgtggagaaagaagaaaacgtacttaaagga
ccagcaagtatctatggcaagggtattcgagtggaatcctccttcagtagtgacatgtta
caggatttggcctggctacagaagagaagaggaataaaactctaccagcgaccagaagga
actcatacgatcaaggttagaatttacctcttggaagctggcctgacaagactagacttc
atgagtgatgcaggctccagaatgaaaaagttcaatcagctcctgaagagagtgatggga
aagttatacagtctcagtattccagatgtgttggaagaagatgaggaggaatcagagagt
gagccagagggccaggacattgatgagctctatcagtttgtgaagcgaacacaccagcaa
gaggcaaagtcagtccaagtggatgtccagcaccctgcactgattccggtgctgaggccg
taccagagagaggcagtcaactggatgctacagcaggagcagttcaggagcactcctgct
gataactccctgcacttcttgtggcgagaaattgttacacctgatggcttgaacctctac
tataatccgtacacaggctgcatcattcgggacttcccacatgctgggccacagttgctc
ggtggaatcttagcagatgagatgggcctcgggaagacagtggaggttctggctctgatt
ctgactcatacccgacaagatgtcagacaggatgccctcaccctgcctgagggaaaagtg
gtaaattatttcatcccaactcattgtcctagaggaaaagtgaaaagtagagaaatccag
aatacagagtgtgaaccaaaagagaaagttcactgccctcccacacgtgtgatgattctg
acagctgtgaaagaaatgaatgggaaaaaaggcgtttctattctttctatctataagtat
gtcagctccacattcagatacgacgttcagcggaaccggagtcttctgaagcggatgttg
aaatgtttaatctttgaaggtcttgtgaaacagattaaaggccgtggtttctctgggact
tttacactgggaaagaattacaaagaagatgtatttgataaaacgaaaaagcaggcagta
gggagtccacaaaaaattgagaaagagttaaggaaatcagtgaacaaggatacagattct
gaatacatgccatcagacatttatgatgacgataatgacaacgacgatgacgacgacgat
gatccttattattattactgcaaggcaagaaaaagccgtaagttgaagaagaagcctgtg
ttactcactaaaaaggaaaagggtcagcctgtcaatctggattcccaagttgaggctcca
gctgctggtgactgtgcaagcgccgatgctcatgtgtcagaaagtacatgtgtctctgaa
aacaggcagatccaagacgcagaggactgtgttgagtctccaagcccggccgccatggag
ctggcacagtctaacactgcaagtttctgtgagacccctgactaccgctttgagtgtata
tgtggtgaatttgaccagatcggccgcaagccaagagttcagtgtctgaagtgtcacctg
tggcagcatgcaaagtgtgtgaattacgaggagaagaatctgaaggttaagcctttttac
tgccctcattgcctggttgcaatggagccagtgtcaaccagagcgactctcatcatctcc
ccaagctccatttgccaccagtgggtagatgaaatcaaccggcacgtgagatcgtcatcc
cttcgagttttggtatatcaaggagtgaagaaagatgggttcttacagcctcattttttg
gcagaacaagatatagttatcattacctatgatgttctccgttcagaattaaactatgtc
gatatcccacatagcaatagtgaagatgggcgtcgcctgaggaaccagaagcgctacatg
gccattcccagccccctggtagcggtggagtggtggcggatctgtctggatgaagcgcag
atggtcgagtgtcctacagtaaaagctgcagaaatggcccagcgtttgagtggcattaat
cggtggtgtgtcagtggcactccagtgcagagaggattggaagatctttttgggctggtg
gtctttcttgggattgaaccttattgtgtcaaacactggtggattcgacttctctatcat
ccatactgcaagaaaaatcctcaacacctgtacagttttattgctaagataatgtggagg
tccgcaaagaaagatgtcattgaccaaatccagatcccacctcagactgaagaaatgcac
tggctccatttttcccctgtggagaggcatttctaccaccgccagcatgaggtgtgctgc
caggatgctgtggtaaagctcaggaagatctcggactgggccctgaagctgagcagcttg
gacagaaggacggtctcctccatcctgtaccccctgctgagactcaggcaggcctgctgc
cacccacaggctgtgcgtggggagttcctgccactccagaagagcaccatgacgatggag
gagttgctgacatctttgcagaagaagtgtggaacagagtgtgaagaggcccaccggcag
ctagtttgtgcccttaacggcttagcaggcatccacatcattaaaggtagaagagcacag
tacagagcagcccttgctttgcctcccccagaatgtgtcattcttagtgaatacgccttg
gcagcggaactctacagagaagttttaaggtcgtctgaggagcacaaaggaaaactcaaa
actgattcacttcaaagacttcacgccacacataacctgatggagctcctggtagccaaa
cacccagggataccgcccaccctgagagatggcagacttgaagaagaggccaagcagctc
cgagagcactacatgagcaagtgtaacacagaggtggccgaagcccagcaagctttgcag
cctgtgcagcagtccattcgggagctccaaaggaaggttcattctggttctccttggtgg
ctgaatgtagttcacagagcaatggagtatgctgttgacgaggagcttgttcagcgcgtg
cgaaatgagataagcagtaactacaagcaccaaacggacaaactctccatgtcagagaag
ttccgtgactgtagaggtcttcagttcttacttacaacacaaatggaagagctgcacaag
ttccagaagctagtgagggaggctgtgaagaagctggagaaacctccgtcccgggatgtg
attgagtctgcaacagtttgccacctgcggccagctagactccctctcaactgctgtgtc
ttttgtaaagctgatgaattgttcacagagtatgagtcaaagctattttctaacactgtc
aaaggccagaccgccatctttgaagaaatgatagaagatgaagaaggactcgtggatgat
agagtccctaccactaccagaggcctgtgggccgtgagcgagacggagcgatctatgaaa
gcaatactatcatttgcaagatcacataggtttgacgttgaatatatagatgaaggaagt
gtttcaatggatctcttcgaggcatggaagaaggagtataagttacttcatgaatactgg
atgactctgagaaaccgcgtatccgctgttgatgaacttgcaatggctacagagcgacta
agagtgcgccatcccaaggagccaaagccaaacccacccgtccaccacatcattgaacca
cacgaggttgaacagaatcgtataaaactagtaaatgataaagctgttgctacttcccag
cttcagaagaaacttggacagcttctttacctgacaaatttggagaagtctcaggacaaa
acatcaggaggtattaatccagagccttgtccgatctgtgctcggcagttgggaaaacag
tgggcagtgctgacctgcggacactgcttctgtaatgaatgcacttcaattataattgaa
caatacagtgtgggatcccatcgaagctccattaagtgtgctatctgccgccagaccaca
tcacacaaagaagtctcctatgtcttcacttcagagaaggcaaaccaagaggatgatatc
cctgtgaagggtagccattctacaaaagtggaagctgtggtcagaactctgatgaaaata
caacttaaagatccgggggccaaagcgctcgttttctcaacgtggcaagatgtgttagat
attatttcaaaagctctcacggacaacaacatgggattcacacaaatcagtcgcattaag
acattccaggagaacctttcagcatttaaatatgatccccagatcaatattttgctgctg
cccctgcatacaggctctaatggattaactatcattgaagccactcatgtcctcctggtg
gaaccgatactgaatcctgcccatgagcttcaggccattgggagagtgcaccgaattgga
cagacaaaacctactattgtacatagattcttaattaaagcaacaatagaagagcggatg
caggcaatgctaaagactgctgagaggagccacaccagctcgtctgggaagcattctgaa
gcctctgcactgaccgtggctgacctggcagacctgttcaccaaagagagtgaggagctt
gaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (12)   
   Pfam (12)   
All databases (31)   

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