KEGG   Rattus norvegicus (rat): 308311
Entry
308311            CDS       T01003                                 
Symbol
Cnot3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    308311 (Cnot3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    308311 (Cnot3)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     308311 (Cnot3)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     308311 (Cnot3)
SSDB
Motif
Pfam: Not3 NOT2_3_5_C DUF4407 PI3K_P85_iSH2
Other DBs
NCBI-GeneID: 308311
NCBI-ProteinID: NP_001100941
RGD: 1304771
Ensembl: ENSRNOG00000053234
Position
1:complement(74471284..74487527)
AA seq 751 aa
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNQHPQSPAVPPTYPSGPPPATSALSSTPGNNGASTPAAPPSALGPKASPA
PSHNSGTPAPYAQAVAPPNASGPSNAQPRPPSAQPSGGSGGGSGGSSSNSNSGTGGGAGK
QNGATSYSSVVADSPAEVALSSSGGSSASSQALGPTSGPHNPAPSTLKESSTAAPSGAGS
VASGSGNNSGGPSLLVPLPVNPPSSPTPSFSEAKAAGTLLNGPPQFSTTPEIKAPEPLSS
LKSMAERAAISSGIEDPVPTLHLTDRDIILSSTSAPPTSSQPPLQLSEVNIPLSLGVCPL
GPVSLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEF
YQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQG
TYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgaa
ggtgtggagcagtttgaagatatttggcaaaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaagacatgggtagcatccaatgagatcaaggacaaaaggcagcttatcgaaaac
cgcaagctcattgaaacgcaaatggaacggttcaaagttgtggaacgagagaccaaaacc
aaagcctatagcaaggagggtctcggtctggctcagaaggtggaccctgcccagaaggag
aaggaagaggttggccagtggctcacgaacaccattgacaccttaaatatgcaggtggac
cagtttgagagtgaggtggagtcactgtcagtacagacgcgcaagaagaaaggcgataag
gataagcaggaccggattgagggcttgaagcggcacatcgagaagcaccgctaccatgta
cgtatgctggagaccatcctgcgcatgctggacaatgactccatcctggttgatgccatc
cgcaagatcaaggatgatgtagagtactacgttgactcatcccaggaccccgactttgaa
gagaatgagttcctctatgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccccccagccacagccacatggaggacgagatcttcaaccagtctagcagtaca
cccacctcaacaacctccagctctcccatcccacccagcccagctaactgcactacggaa
aactctgaagatgataagaagagaggccgctctacagatagtgaagtcagccagtctcca
gccaaaaatggctccaagcctgtccacagcaaccagcacccccagtccccagctgtgccg
cccacctacccctctggccccccacctgccacttctgccttgagctccacccctggcaac
aatggggcctctaccccagcagcacctccaagtgccctgggccctaaggccagtccagct
cccagccacaactcgggtactcctgccccctatgcccaggctgtggccccacccaatgcc
agcgggcccagcaatgcccagccccggccccccagtgcccagccaagcgggggaagtggt
ggtggcagcggagggagcagcagcaatagtaacagtggcacaggcggaggggctggcaag
cagaacggtgccaccagctatagttcggttgtggcagacagccctgcagaggtggccctg
agtagcagtgggggcagcagtgccagcagccaagccctggggcccacatcgggccctcat
aacccagctcccagcaccttaaaggaatccagtacagcagccccatccggggctgggagt
gtggcttcaggctcagggaacaactcagggggacccagcctcttggtgccactgcctgta
aatccccccagttctccaacgcccagcttcagtgaagccaaggcagctggcactcttctt
aatggtcccccacagtttagcaccaccccagaaatcaaggcccctgaacctctgagctct
ctgaaatccatggcagaacgggcagctatcagctctggtattgaggaccctgtgccaacg
ttacacctaactgatagagacatcatcctgagcagcacatcagcaccacccacctcatcc
cagccacccctgcagctatcagaggtgaacataccattgtcactgggcgtctgtccattg
gggccagtgtccctcaccaaggagcagctataccaacaggccatggaagaggccgcctgg
caccacatgccccacccctctgactccgagcgcattcggcagtaccttccccggaaccct
tgcccgacacccccctaccaccaccagatgccacccccgcactcggacactgtggagttc
taccagcgcctgtcaactgagacgctcttcttcatcttctactatctggagggaaccaag
gcacagtacttggcagccaaggccctaaagaagcagtcctggcgattccacaccaagtat
atgatgtggtttcagaggcatgaggagcccaagaccatcacagatgagtttgagcagggc
acctacatctactttgactacgagaagtggggccagcggaagaaggaaggcttcaccttt
gagtatcgctacctggaggaccgggacctccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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