KEGG   Rattus norvegicus (rat): 308322
Entry
308322            CDS       T01003                                 
Symbol
Zim1
Name
(RefSeq) zinc finger, imprinted 1
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    308322 (Zim1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    308322 (Zim1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    308322 (Zim1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf-C2H2_6 Zn-ribbon_8 zf-C2H2_jaz zf_UBZ zf-met zf-C2H2_11 XPA_N zf-C2HC_2
Other DBs
NCBI-GeneID: 308322
NCBI-ProteinID: NP_001100943
RGD: 1310930
Ensembl: ENSRNOG00000015071
UniProt: D3ZYW5 A6KS64
Position
1:76165208..76186843
AA seq 578 aa
MKRKSVSEVKTTAPVNEALPSPNPDQTPNQLSEKKRRIPTTSLPTWYKEPVIFKDVAVYF
SQKEWQLLEPAQKDLYKDVMLENYGNLISVEYYIFKPKLITRLEQGIDLFAKENDTPGDP
QQGEAGVSRSDTSAGKKTGNNSTKAETRKPDNSKNVSQEKLKKADQGGGSQNLRAEKTSK
SDDRPSQNKEKSDSTSTTEAGKTTNPGNQENESAAPGTSSSQTPSTTAPQSTPPEKSTSG
KDGQGKSPNTSSSTNPKRKPARQGKNHFKCKECGKTFNQTLHLVEHERIHTGEKPHKCDT
CGKSFRHLSYFLTHYRIHTGVRPYKCKECGKAFNSSSTLNNHCRIHSGEKPFKCDECGKT
FKQSTKLTRHQRIHTGEKPYKCGECNKCFGRSSSLREHKRIHTGEKPYRCQVCGKTFRVN
SHLSEHQRLHLKVKPYKCDKCGKHFRNSSYLSEHKQIHVPGARVDCPECGKVFACKVALL
KHQKRHEANSRYRCKGCGKTFRCKSSIQRHERLHAGEKPFVCTKCDKGFTDKTTLNNHLK
IHSGDRPDPCAQCGRTFKKLATLLIHQKKHNKKKPTDE
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgaagagaaagagtgtctcagaggtgaagactacagccccagttaatgaagccttacct
tcaccaaatcctgatcagacaccaaaccagctctctgaaaagaagcgaagaattccaacc
acatctttgccaacctggtacaaggaaccagtgatcttcaaagatgtagctgtgtacttc
agccagaaagagtggcagctactggagcctgctcagaaggacctgtacaaggatgtgatg
ctggagaactacgggaacctgatctctgtggaatattatatttttaagccaaagttgatc
accagattggagcaaggaattgacctttttgccaaagagaatgatactcctggagacccc
cagcaaggtgaggcgggagtcagcagaagtgacacctctgcagggaagaagacggggaat
aattccacaaaggcagaaacccggaagccagataactctaagaacgtgtcacaggagaag
ctgaagaaggcagatcaagggggtggttcccagaatttgagagcagaaaagacctcaaaa
agtgatgacaggccatctcaaaataaggagaagagtgactcaacttcgactacagaagca
ggcaaaaccaccaatcctggcaatcaggagaatgaatctgcagccccggggacatcttcg
agtcaaacaccatcaactacagcaccacagagcactcctccagaaaagtcgacatcaggg
aaagatggtcaaggaaaatcacctaacaccagcagttccacaaacccaaagcgcaagcct
gcccgacaaggtaaaaaccactttaaatgcaaggaatgtgggaaaaccttcaaccagacc
ctccacctcgtggagcatgagcgaatccacacgggagagaaaccccacaagtgcgacacg
tgcggcaaatctttccggcacctctcctacttcctcacacactaccgaattcacacgggc
gtgagaccatacaagtgtaaggagtgtgggaaagccttcaacagcagctccactctcaac
aatcattgcaggatccactcaggcgagaaacccttcaaatgcgacgagtgtgggaaaacc
ttcaagcagagcacgaagctcacccgtcaccaacggattcacaccggggagaaaccctac
aagtgtggagagtgtaacaagtgctttggccgcagctcgtccctgagggagcacaagagg
attcataccggagagaagccataccgctgtcaggtgtgtgggaaaaccttcagggtcaac
tcacatctttcagagcatcagcggctccatttaaaggtgaagccctacaagtgtgataag
tgcgggaagcacttccgaaacagctcgtacttgtcggaacacaagcagatccatgtgccc
ggggcccgagtggactgcccagaatgtgggaaagtcttcgcttgcaaagtagcccttctc
aagcaccagaagagacacgaggcgaactccaggtatcggtgcaagggatgtggaaagact
tttaggtgtaagtcaagcatccaaaggcatgagaggctgcacgctggggagaaacctttt
gtgtgcactaagtgtgacaaaggtttcactgacaaaactacactgaataatcacttgaaa
atccactctggagataggccggatccatgtgcccagtgcgggagaacctttaaaaaactg
gctaccctgttgattcaccagaaaaagcataataagaagaaacccacagatgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (26)   

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