KEGG   Rattus norvegicus (rat): 308341
Entry
308341            CDS       T01003                                 
Symbol
Ssc5d
Name
(RefSeq) soluble scavenger receptor cysteine-rich domain-containing protein SSC5D precursor
  KO
K25740  soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09190 Not Included in Pathway or Brite
  09193 Unclassified: signaling and cellular processes
   99995 Signaling proteins
    308341 (Ssc5d)
SSDB
Motif
Pfam: SRCR SRCR_2
Other DBs
NCBI-GeneID: 308341
NCBI-ProteinID: NP_001128017
RGD: 1565772
Ensembl: ENSRNOG00000016687
UniProt: A6KNQ6 D3ZPK4
Position
1:complement(77920781..77939284)
AA seq 1436 aa
MRVLACLLAMLVGIQAIERLRLADGPHGCAGRLEVWYSGRWGTVCDDGWDLRDAAVACRV
LGCGGALAAPGGAFFGEGTGPVWLSELACRGSEGQLGICPHRGWKAHICSHEEDAGVVCV
GQRAANSREDSVSLLDGDPWLALSGELSPSSEEPPITHAPQPAASSQNGPRKKNPRPPKQ
VKSTRAPVLTNGAPRQERLRLVSGPHGCAGRLEVWHGGRWGTVCDDGWDLRDAAVACREL
GCGGALAAPGGARFGPGEGPVWMDDVGCGGGEEALRDCPRSPWGRSNCDHTEDAGLVCTG
PAPRLRLADGPHGCAGRLEVWHGGRWGSVCDDAWDLRDAAVACRELGCGGALAAPGGAFF
GEGAGPIILDDLRCRGNETALRFCPARPWGQHDCHHREDAGAVCDGMPLGGDVQPTAPAV
DSNRTTPRLQSTSVGHTPGPAGSWPPPASPTAPPEPGPEAGSPQLRLVAGPSRCSGRLEV
WHDGRWGTVCDDSWDMRDSAVVCRELGCGGPRQPDPAAGRFGWGAGPIWLDDVGCVGTEA
SLSECPAASWGKHNCAHNEDVGVTCTGTPGLDTISDPFSWSWLPGLGRDQDAWLPGELAT
KPSASLTSSVLQKTTKAPGKVPKSTKKWVTKNAKRPTTQPPGIPITKRPRVPGTPTSLSP
TPRTSELPKRLTAEAPRRQTSHTTERLTPRVPWEWTSETAASLSTQGPQEVTSEATTAQT
PQTSLEPFGENPEGSLESSQDPAATPTAGVPVPSGPFRVRLADGPNRCAGRLEVWHAGLW
GTVCDDSWDLRDATVACWELGCGKVRPRVGKTHYGPGTGPIWLDDMGCKGSETSLSDCPS
GTWGKHNCDHEEDVVLTCTGYTGDDDYPSWTWDPTSEEDLTKRTTVATQPGHTPSWATTT
NPEVLSPATQSLPDIDDQGSYELSWTWDTPSGRSLSKGTPTTTKPGSTVTTSTRKSPGHP
FPAPRARANTGLPRKPKPERRTLQPTSARTTHTTSSPASYTSPEPSGSQQTSGSWPQLFP
DLASKQEGTSTPPKTSPLTPGLPSPTNFALSTTDASLLPTRPPELSGSPTSNSPEGLTSD
SPMLLEVSSLSPTSELTPGSDMTPDLGTAPKIIPESSESSDLPTSPSTHTQPFTASYPTS
IPHPTTIPHPTTTPHPRAPSHPTTIPQLNTTSYPTMALQPTTNPQHPGSPHPTTSPQPPT
NTHSSSTSATPTKSLPSSPETEFSSPTPQPRVKPSLHPDLTFVGVPPTGKSQMQNLEFSL
ASESGPSRPSPAPSMDPLSTEVFKPPRSQTLHSVSEPMVTADLAISSMAHPSDQPPPDRL
AQGPTSNHNPGPFGPCVSSVPPVRVMACEPPALVELVAAVREVGDQLQRLTRVLEQDRQE
RQVLGLGLVKLVEAAQGLGQLSETVKRLAEVAWPPSTPVPTTTTTEEEERPLRGDV
NT seq 4311 nt   +upstreamnt  +downstreamnt
atgagggtcttggcgtgtcttcttgcaatgctggtggggatccaggctatagagcgactc
cgcctggctgatggccctcatggctgtgcaggacgcctggaggtctggtacagcgggcgc
tggggcaccgtgtgtgatgacggatgggaccttcgggatgctgcagtggcctgccgtgtg
ttgggctgcggaggggcgctagccgcccccgggggtgccttctttggggagggcactggg
cccgtgtggctcagtgagctggcctgtcggggcagtgagggacagctgggtatctgtccc
caccggggctggaaggctcatatctgctctcacgaggaggacgcgggcgtcgtctgtgta
ggtcagcgtgcagctaactctagagaagactcagtgtccctgctggatggggacccatgg
ctggcactgtctggggagctgagccccagctcagaggagccccctataactcatgctccc
cagccggcagcaagctcccagaatggcccccgaaagaagaacccccggccacccaagcag
gtcaagtccacccgagcccctgtactgacaaatggagctccccgccaagagcggctgcgt
ctggtctcaggtccccatggatgtgccggccgcctggaagtctggcacggtggacgttgg
ggtactgtctgcgatgatggatgggacctccgagacgcagcagtggcctgtagggagcta
ggatgtgggggagcgctggccgcccctggaggtgccagattcggacctggtgagggaccc
gtgtggatggacgatgtcgggtgtggaggaggagaggaggccctccgggactgtccccga
agcccctggggccggagcaactgtgaccacacagaggatgcagggctggtctgtactggt
cctgcacccaggttgcgccttgctgatggtccccacggctgtgctgggcgcctggaggtt
tggcatggtggccgctgggggtcggtatgtgacgatgcttgggatcttcgtgatgccgct
gtggcctgcagggagctgggctgtgggggtgccctggctgccccagggggtgccttcttt
ggtgagggggctggacccatcatcctggatgacctcagatgtcgaggaaacgagacagcc
ttacgattctgccctgcgaggccctggggtcagcatgactgtcaccatcgggaggatgct
ggggctgtgtgtgatggcatgcctctcggtggcgatgtgcagcctacagctcctgcagtg
gacagcaacagaacaacacccaggctccagtctacctcagtgggtcatacgccaggccca
gcaggcagttggcctcctcctgcttctcctactgcccctccagagcctggacctgaagct
gggtccccccagttgcgcctggtggctggacccagcaggtgctctggtcggctggaggta
tggcatgatggacgctgggggacagtatgtgatgacagctgggacatgagagactcagct
gtggtctgccgggagctgggctgtggggggccccgacagccagaccctgcagcaggccgc
tttggctggggcgcaggccccatctggctggatgatgtaggttgtgtggggacggaggct
tcactgtcagaatgccctgctgcttcctgggggaaacacaattgcgcccacaatgaggat
gtcggggttacctgcaccgggacccccggcctggacaccatctcagaccctttcagttgg
agctggctccctgggctgggtagagatcaggatgcctggctcccaggagagctggccacc
aagccttctgccagtctcacctccagtgtgctacagaaaaccacaaaggctccagggaaa
gtgcccaagagtaccaagaagtgggtgactaaaaatgcaaagagaccaaccactcagccc
cctgggataccaatcactaaacgccccagggtcccaggcaccccaacctccctaagccca
accccacgtacctctgagttaccaaagagacttactgccgaggctcctcgcagacagacc
tcacacaccaccgaaaggctgacccctagggtcccctgggagtggacctcagagaccgcg
gcatcactgtccactcaaggcccccaagaagtgacctctgaggccaccaccgcacaaacc
cctcagacctccttggagccatttggtgagaacccagaaggctctctagaatcttcccag
gatccagctgccaccccgactgctggagttcccgtgccatcgggtcccttccgggttcgt
ctggctgatgggcccaacaggtgtgctggccggctagaggtgtggcatgccgggctctgg
gggacagtctgtgatgacagctgggacctccgggatgccacagtggcctgctgggaactg
ggttgcggaaaggtccggccccgagtaggcaaaacccactatggccctggcactgggccc
atctggttggatgacatgggctgtaagggaagtgagacgtcactgagtgactgcccctcg
gggacatgggggaagcacaactgtgaccacgaagaagacgtggtgctcacctgcactggc
tacacaggggatgacgattacccttcctggacctgggaccccacttcggaagaggacctg
accaaaaggaccacagtggccacacagcctggacatacaccttcctgggctactaccaca
aaccctgaagttctctctccagcaacgcagagccttccagacatagatgaccagggtagt
tatgagctctcctggacatgggatacaccttcaggaaggagtctgtccaaagggaccccc
accacaaccaaacctggatccacagttaccactagcaccagaaagagtccaggccatccc
tttccagctccaagggcccgtgcaaacacaggtttaccaaggaagccaaaacctgagcgc
cggacgctgcagcccacctcagccaggacgacacacaccacctcatccccggcttcctac
acctcaccagagccttctggctcacagcagacctctggctcctggccacaactcttccca
gacttggcttcaaagcaggaggggacgtctacccctcccaaaacatctccactcacccca
ggacttccctccccaacaaactttgccttgtccactactgatgccagtttgcttccaaca
cgtcccccagagctttcaggcagcccaacatccaactcccctgaagggctaacctctgac
tcccccatgctattagaagtgagcagcctttcccctacctcagagctgacgccaggatct
gacatgacaccagacctgggcacagcacccaaaataatcccagaaagttctgagtcctca
gacctccccacgagccccagcacccacacacaaccattcacagcctcttaccctaccagc
atccctcaccccaccaccatccctcatcccaccactacccctcatcctagagccccctcc
caccccaccaccatccctcaactcaacacaacttcctaccccaccatggccctgcaacct
accaccaaccctcagcatcccgggagccctcatcccaccacaagtcctcaacctcccacc
aacactcactcttcttcaacctctgccacccccacaaagtcccttccatcctccccagag
acagaattttcctctcctactccacaaccaagggtcaagcctagcctacacccagatctg
acctttgtaggagtcccgcccacaggcaaatcccagatgcagaacctagagttctctcta
gcctcagagtctggcccctccaggccctctccagccccaagcatggacccactatccaca
gaggtcttcaaaccacccagaagccagaccttacactcagtttcagaacccatggtgacc
gctgaccttgccatctcctctatggcccacccatctgaccaacctcccccagatcgcctc
gctcaagggccaacttctaatcacaacccaggtccctttgggccatgtgtctcctcagta
ccacctgtaagggtcatggcttgtgagccacctgccttggtggagctggtggctgctgtg
agggaggtgggtgaccagctgcagaggctgacccgggtcctggagcaggaccggcaggag
cgccaagtcctggggctgggcctagtcaagttggtagaggctgcccaggggttggggcag
ctaagtgagactgtaaagaggcttgcagaggtggcctggccccccagcacacctgtgccc
acaaccaccaccacagaggaggaggagaggcctctgagaggagatgtgtga

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Ontology (1)   
   KEGG BRITE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (111)   
   KEGG ORTHOLOGY (1)   
   RefGene (105)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (123)   

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