KEGG   Rattus norvegicus (rat): 308387
Entry
308387            CDS       T01003                                 
Symbol
Npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
  KO
K09098  neuronal PAS domain-containing protein 1/3
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    308387 (Npas1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    308387 (Npas1)
SSDB
Motif
Pfam: PAS_3 PAS_11 PAS HLH PAS_4
Other DBs
NCBI-GeneID: 308387
NCBI-ProteinID: NP_001100949
RGD: 1310040
Ensembl: ENSRNOG00000015376
UniProt: A6J8B4 D3ZJ66
Position
1:complement(86295509..86316018)
AA seq 595 aa
MATPYPRSGGRGEVKCGGGRGAGVPWDFLPGLMVKAPPGPCLQAQRKEKSRNAARWRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAVGPPAGLA
PGRRGAVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SVFDYIHPGDHSEVLEQLGLRAATTGPPTPPSVSSTSSSSSSSSLVDTPEIEASPTEASP
AFRVQERSFFVRMKSTLTKRGLNVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAEL
PLHGHMIVFRLSLGLTILACESRVSDHMDMGPSELVGRSCYQFVHGQDVTRIRQSHLDLL
DKGQVVTGYYRWLQRAGGFVWLQSVATVAGNGKSAGEHHVLWVSHVLSHAEGGQTPLDAF
QLPAIVSQEESSSPGPEPTKEEPPVERKQTVPVEQDKDKDPQARGKRIKVEASPKEVRGS
EDSGEEEVSDPPAPPRPEFTSVIRAGALKHDPVLPWGLTTPGDPSPALLHAGFLPPVVRG
LCTPGTIRYGPAELSLMYPHLHRLGPGPSLPEAFYPTLGLPYPGPTGTRVQRKGD
NT seq 1788 nt   +upstreamnt  +downstreamnt
atggcgaccccctatcccagaagcggtggccgaggtgaagttaagtgcgggggaggccgt
ggagccggcgtcccctgggatttcctgcccgggctgatggtcaaggcccctcccggaccc
tgcctgcaggcgcagcgcaaagagaagtcccgcaacgcggcgcgctggcggcgcggaaag
gaaaatctcgagttcttcgagctggccaagttgctccctctgcccggtgccatctccagt
cagctggacaaggcgtccatagtgcgtcttagcgtcacatacctccgcctgcgtcggttt
gcggctctgggagcgcctccctgggggttgcgggccgtcgggcctcccgctggcctcgcc
ccaggtcgccgaggcgctgtggctctggtgtctgaagtcttcgagcaacacctaggtgga
cacatcctacagtccttggatggcttcgtgttcgccttgaaccaggaagggaaattcctc
tacatctcagagacagtgtccatctacttgggtctctcacaggtggagctgacgggcagc
agcgtcttcgactacatccatcctggggaccactcggaggtcctagagcaacttggactg
agggccgcaaccactggcccccctacgccgccttctgtgtcctccacttcctcctcgtcg
tcttcctcctcgctggtggacacccccgagattgaagccagccccacggaggcatcccct
gccttccgggtccaggagcggtccttctttgtccgaatgaagtctaccctcaccaagagg
ggtctgaatgtcaaagcctcggggtacaaggtcattcatgtgacaggacgcctgagggcc
cgagcgctgggtcttgtagcccttggacacacgctgcccccagccccgctggctgagctg
cctctgcatggacacatgattgtgtttcgcctcagcctgggcctcaccatccttgcttgt
gagagcagagtgagcgaccatatggacatggggccctcagaactggtgggacgcagctgc
tatcagtttgtccacggacaggatgtgaccaggatccgccaaagccatctggacctgctg
gacaaagggcaggtggtgactggttactaccgttggctgcagcgtgcggggggcttcgtg
tggctgcagtctgtagccactgtggccgggaacgggaagagtgctggggagcatcacgtg
ctgtgggtcagtcacgtgctcagccatgctgaaggtggtcaaacacccctggatgccttc
cagcttccagccattgtgtctcaggaggagtcatccagcccaggcccagagcccacaaag
gaagagcctccagttgagcggaaacagactgtgcctgtggaacaggacaaggacaaggac
cctcaggcccgaggcaaacgcatcaaagtggaggccagcccgaaggaagttagaggctca
gaagacagtggagaggaagaggtctcggatccaccggctccgcctcggccggaattcact
tctgtcattagagcaggggccctgaagcatgatccagtactgccgtggggtttgacaact
cctggagacccctcgcctgccctccttcatgcaggcttcctgccacccgttgtgcgaggc
ctgtgtaccccaggcaccatccgttatggccctgcagagttaagcctgatgtatccacat
ctgcacaggctgggtccaggcccctcgcttccagaggccttttaccctacgctgggcctg
ccctatccggggcccacaggtactagggtgcagcgaaagggagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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