KEGG   Rattus norvegicus (rat): 308404
Entry
308404            CDS       T01003                                 
Symbol
Irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
  KO
K22383  interferon regulatory factor 2-binding protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    308404 (Irf2bp1)
   04121 Ubiquitin system [BR:rno04121]
    308404 (Irf2bp1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    308404 (Irf2bp1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Atypical E3
   308404 (Irf2bp1)
SSDB
Motif
Pfam: IRF-2BP1_2 zf-C3HC4
Other DBs
NCBI-GeneID: 308404
NCBI-ProteinID: NP_001100953
RGD: 1308312
Ensembl: ENSRNOG00000014252
UniProt: A6J8I8 D4AAZ8
Position
1:87780782..87783483
AA seq 584 aa
MASVQASRRQWCYLCDLPKMPWAMVWDFSEAVCRGCVNFEGADRIELLIDAARQLKRSHV
LPEGRSPGPPALKHPTSKDLASTGSQGSQLPPPQAQAQPSGTGGSVSGPDRYDRATSSSR
LALPSPALEYTLGSRLANGLGREEAVAEGARRALLGSIPSLMPPGLLAAAVSGLGGRALT
LAPGLSPARPLFGSDFEKEKQQRNADCLAELNEAMRGRAEEWHGRPKAVREQLLALSACA
PFNVRFKKDHGLVGRVFAFDATARPPGYEFELKLFTEYPCGSGNVYAGVLAVARQMFHDA
LREPGKALASSGFKYLEYERRHGSGEWRQLGELLTDGVRSFREPAPAEALPQQYPEPAPA
ALCGPPPRAPSRNLAPTPRRRKASPEPEGETAGKMTTEEQQQRHWVAPGGPYSTETPGVP
SPIAALKNVAEALGHSPKDPGGGGGSVRAGGASPAASSTTQPPTQHRLVARNGEAEVSPT
AGAEAVSGGGSGTGATPGAPLCCTLCRERLEDTHFVQCPSVPGHKFCFPCSREFIKAQGP
AGEVYCPSGDKCPLVGSSVPWAFMQGEIATILAGDIKVKKERDP
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggcgtccgtgcaagcgtcccgccgccagtggtgctacctgtgcgacctgcccaagatg
ccgtgggccatggtgtgggacttcagcgaggccgtgtgccgcgggtgcgtgaatttcgag
ggcgcggaccgcatcgagctgctcatcgacgctgcccgccagctcaagcgcagccacgtg
ctccccgagggccgctcgccgggacccccggctctcaagcacccgacctccaaggacctg
gcctccacgggctcccagggctcccagttgccacccccgcaggcccaggcgcagccatcg
gggaccggaggtagcgtctcaggcccggaccgctatgacagggctacttcatccagccgc
ctggcgctgccttcgccggctttggagtacaccctggggtcccgcttggccaacgggctg
ggccgggaggaggctgtggcggaaggggcacgcagggctttgcttggctccatccccagc
ctgatgccccccgggctgctggcagctgcagtgtctggcctcggaggccgagctctgacg
ctggcacctggcttaagccccgctcgtccacttttcggctccgatttcgagaaggagaag
cagcagaggaatgcggactgtttggcagaactgaacgaggccatgcggggccgggcggag
gagtggcatgggcgtcccaaggctgtaagggaacagctactggcgctgtccgcctgtgcc
cctttcaatgtccgattcaagaaggaccatgggctggtgggacgggtatttgcctttgat
gccactgcccgccctcctggctatgagtttgagctgaagctcttcaccgagtatccctgt
ggttctggcaatgtgtacgcgggggtccttgcagtggctcgccagatgtttcatgatgct
cttcgagagccagggaaggccctggcctcatcgggcttcaagtacctcgaatatgaacgc
cgccacggctcaggggaatggcgccagttgggagagctacttaccgatggggtccgaagc
ttccgagagcctgctcctgcggaggccctgccccagcagtacccagaaccggcccctgct
gctctgtgtggcccaccaccgagagccccatcccggaacctggcacccacaccacgacgt
cgcaaagcatcccctgagcccgagggcgagacagctgggaagatgaccacggaggagcag
caacagcggcactgggtggcaccaggcggtccatactctacagagacccctggtgtgcct
tcacctattgctgcccttaagaatgtggcggaggctctgggccactcacccaaggaccct
ggtgggggtggaggctctgtccgtgcagggggtgctagccctgcagcttcctccacgacc
cagccaccaacccagcatcgtctagtggcacgcaatggagaggcagaagtcagtcccacg
gccggggctgaagctgtcagcgggggtggtagcggcacaggggcgacccctggagccccc
ttgtgctgtaccctgtgcagagaaaggctggaagacacccacttcgtgcagtgtccctcg
gtacctggacacaagttctgctttccttgctcccgagagttcatcaaggcacagggtcca
gctggagaggtgtactgccccagtggagacaaatgcccactggtgggttcctctgtcccc
tgggccttcatgcagggcgagatcgctaccatccttgctggtgacatcaaggtcaagaaa
gaaagggacccctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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