KEGG   Rattus norvegicus (rat): 308417
Entry
308417            CDS       T01003                                 
Symbol
Nectin2
Name
(RefSeq) nectin-2 precursor
  KO
K06531  poliovirus receptor-related protein 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03266  Virion - Herpesvirus
rno04514  Cell adhesion molecules
rno04520  Adherens junction
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    308417 (Nectin2)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    308417 (Nectin2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    308417 (Nectin2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    308417 (Nectin2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    308417 (Nectin2)
   04090 CD molecules [BR:rno04090]
    308417 (Nectin2)
Cell adhesion molecules [BR:rno04515]
 Immunoglobulin superfamily
  Nectin family
   308417 (Nectin2)
CD molecules [BR:rno04090]
 Proteins
  308417 (Nectin2)
SSDB
Motif
Pfam: C2-set_2 ig Ig_3 V-set Ig_2 I-set
Other DBs
NCBI-GeneID: 308417
NCBI-ProteinID: NP_001012064
RGD: 1309505
Ensembl: ENSRNOG00000018730
UniProt: Q5FVC5
Position
1:complement(88500086..88535474)
AA seq 530 aa
MARAAVLPPSRLSPTLPLLPLLLLLLQETGAQDVRVRVLPEVRGRLGGTVELPCHLLPPT
TERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFNKDRLSFVRAKQEANADLRDATLAFRG
LRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCISTGGR
PPARITWISSLGGEARDIQEPGLQAGTVTVISRYSMVPVGRADGVKVTCRVEHESLEEPE
LLPVILSVRYPPEVSISGYDDNWYLGRSEATLTCEVRSNPEPTGYDWSTTSGVFPASAVA
QGSQLLVHSVDRMVNTTFICTATNAVGTGRAEQVILVRESPSTAGAGATGGIIGGIIAAI
IATAVAGTGILICRQQRKEQRLQAADEEEELEGPPSYKPPTPKAKLEEPEMPSQLFTLGP
SEHSPVKTPYFDAGVSCADQEMPRYHELPTLEERSGPLLLGATGLGPSLLVPPGPNVVEG
VSLGLEDEEEDEEEEDFLDKINPIYDALSYPSPSDSYQSKDFFVSRAMYV
NT seq 1593 nt   +upstreamnt  +downstreamnt
atggcccgggccgcagtcctcccgccgtccagattgtcaccgacgctgccgttgttgccg
ctgctactgctcctgcttcaggaaacaggagcccaagatgtgcgggtacgagtgctccct
gaggttcgtggccgcctgggaggcacggtggagttaccatgccacctgctcccacccacg
acggagcgcgtctctcaggtgacctggcagcgcctggatggcacagttgtggctgccttc
cacccatccttcggcgtggatttccccaactctcagttcaacaaggaccgtctgtccttc
gtccgagcgaaacaagaagcaaacgcggacctgcgggacgccacgctggccttccggggt
ctgagggtagaggacgagggcaattacacttgcgagtttgccacgtttcccaacggtacc
cgcaggggagtgacctggctcagagtcatagcccagccggagaaccatgctgaggcccaa
gaggtcacaattggcccccagtcggtagctgttgcccgctgtatctccacggggggccgc
ccccctgcccgaatcacctggatctcatccctgggtggagaggccagagatattcaggag
cccggactacaggctggcacggtcactgtcatcagtcgatactccatggtgccggtgggc
cgagcggatggcgtcaaggtcacgtgcagagtggaacatgagagcttggaagagcccgag
ctgctgcccgtgatcctctccgtgcgctaccctcccgaagtatccatctccggctatgat
gacaactggtacctaggccgcagcgaggccacactgacctgtgaagtacgaagcaaccca
gagcctacaggctatgactggagcacgacctcgggggtcttcccagcctccgcagtggcc
cagggctctcagctgcttgtccactctgtggatcgaatggtcaacactaccttcatctgc
acagccaccaatgctgtggggacaggccgtgctgagcaggtcatcctggtgcgagagtca
cctagcacggcaggagcaggggccacgggaggcatcattggaggcatcatcgctgccatc
atcgccaccgcagtggctggcacaggcatcctcatctgccgacaacagcggaaggagcag
aggcttcaggcggccgacgaggaagaagaactggaaggacctccctcctataagccaccc
accccaaaggccaagctggaggaaccagaaatgccctcacaactcttcactttgggaccc
tcggaacacagcccagtgaagacgccatactttgatgctggtgtctcttgtgctgatcag
gagatgcctcgatatcacgagctgcccaccctggaagagcggtcagggcccctgctgtta
ggggctacaggcctgggaccttctcttcttgtgcctccaggacccaatgttgtggagggg
gtttccctgggtctcgaagatgaggaggaagatgaggaggaggaagatttcctggataaa
atcaaccctatttatgatgccctatcctaccccagcccctctgactcctaccagagcaaa
gacttttttgtgtcacgggccatgtatgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (27)   

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