KEGG   Rattus norvegicus (rat): 308441
Entry
308441            CDS       T01003                                 
Symbol
Exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    308441 (Exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    308441 (Exosc5)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     308441 (Exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 308441
NCBI-ProteinID: NP_001100963
RGD: 1307861
Ensembl: ENSRNOG00000020635
UniProt: F1LSX7 B2RZ47
Position
1:90295495..90305047
AA seq 235 aa
MEGAKRADAKVLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYG
PAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLIRNTCEAVVLGALHPRTSITVVL
QVVSDTGSLLACCLNAACMALVDAGVPMRALFCGVTCALDPDGNLVLDPTTKQEKEARAI
LTFALDSAEQKLLMSATKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSKS
NT seq 708 nt   +upstreamnt  +downstreamnt
atggagggagcaaagcgtgcagacgccaaggtactcactgacaccggaacagagtccagc
cctcgaagtccagtctgcagcctccggcactttgcttgtgagcaaaacctgctgtcccgg
ccggatggatctgcttcttttctgcaaggtgatacctctgtcctggctggagtctacggg
ccggccgaggtgaaggtcagcaaagaaatcttcaacaaagccacccttgaagtgatcctg
aggccgaagatcggcctgcccggcgtggctgagaagagccgggagcgactgatcaggaac
acgtgtgaggcagtggttctaggggccctgcacccccggacctcaatcaccgtggtgctg
caggtggtgagcgacactggctctctcttggcctgttgcctgaatgcagcctgcatggca
ttggtggatgcaggcgtgcccatgcgagccctcttctgtggggtcacctgtgccctggac
cctgatggcaatcttgtgctggaccccacaaccaaacaagaaaaggaggcccgggccatt
ctgacctttgctctggatagtgcggagcagaagctgctcatgtccgccaccaaggggctc
tattctgatgcagagctccagcagtgtctggccgccgcccaagctgcctcacagcacatc
ttccgcttctaccgagaatccctgcagaggcgctactccaagagctga

DBGET integrated database retrieval system