KEGG   Rattus norvegicus (rat): 308476
Entry
308476            CDS       T01003                                 
Symbol
Capn12
Name
(RefSeq) calpain-12
  KO
K04740  calpain-12 [EC:3.4.22.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:rno01002]
    308476 (Capn12)
Peptidases and inhibitors [BR:rno01002]
 Cysteine peptidases
  Family C2: calpain family
   308476 (Capn12)
SSDB
Motif
Pfam: Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1
Other DBs
NCBI-GeneID: 308476
NCBI-ProteinID: NP_001104278
RGD: 1307341
Ensembl: ENSRNOG00000020389
UniProt: D3ZJZ8
Position
1:93298571..93311220
AA seq 719 aa
MASGNRKVTIQLVDDGAAAGAGGPQLFKGQNYEAIRAACLDSGILFRDPCFPAGPDALGY
DKLGPDSEKAKGVEWKRPHEFCAEPQFICEDMSRTDVCQGSLGNCWLLAAAASLTLYPRL
LYRVVPPGQGFQDGYAGVFHFQLWQFGRWVDVVVDDKLPVRDGKLLFVRSEQRNEFWAPL
LEKAYAKLHGSYEVMRGGHMNEAFVDFTGGVGEVLYLRQNTPGVFAALRHALAKESLVGA
TALSDRGEIRTDEGLVKGHAYSVTGTHKMSLGFTKVRLLRLRNPWGRVEWSGPWSDSCPR
WDMLPSEWRDALLVKKEDGEFWMELQDFLTHFNTVQICSLSPEVLGPSPAGGGWHIHTFQ
GRWVRGFNSGGSQPSAENFWTNPQFRLTLLEPDEEEDEDDEEGPWGGWGAAGARPARGGR
VPKCTVLLSLIQRNRRCLRAKGLTYLTVGFHVFQIPEELLGLWDSPRSRALLPGLLRADR
SVFCARRDVSRRCRLPPGHYLVVPSASRVGDEADFTLRIFSERSHTAVEIDDVISADLDA
LQAPYKPLELELAQLFLELAGEEEELNALQLQTLISIALEPARNNTRTSGEIGLRTCEQL
VQCFGRGQRLALYHFQELWGHLLSWQATFDKFDEDASGTMNSCELRLALTAAGFHLNNQL
TQALTSRYRNSRLRVDFEHFVCCAARLTCIFRHCCQHLDGGEGVVCLTHKQWSEVATFS
NT seq 2160 nt   +upstreamnt  +downstreamnt
atggcgagtggcaacaggaaggtcactatccagctggtggacgacggggccgcggctgga
gctgggggcccacagctctttaagggtcagaactacgaagccatccgagcagcttgcctg
gattccgggatcctgtttcgtgacccttgcttccctgctggccctgatgcccttggctat
gacaagctgggacctgactcagagaaggccaaaggggtggaatggaagaggcctcatgag
ttttgtgccgagccccagttcatctgtgaagacatgagtagaacagatgtgtgccagggc
agcttgggaaactgctggcttctagcagcggctgcctctctcacgctgtaccccagactc
ctgtaccgggtggtcccccctgggcaaggcttccaagatggctatgctggggttttccac
tttcagctctggcagtttggccgatgggtggatgtggtggtggacgacaaactgcctgtg
cgtgacgggaagctgctctttgtgcgctcagaacaaaggaacgagttctgggcccctcta
ctggaaaaggcctatgccaagctccacggctcctatgaggtaatgcgaggaggtcacatg
aacgaggcatttgtggactttacgggaggcgtgggcgaggtcctctacttgagacagaac
accccaggtgtctttgccgcccttcgccatgccctggccaaggagtcccttgtgggtgcc
actgccctgagtgatcggggtgagatccgcacagatgaagggcttgtgaaaggacatgct
tattctgtcacaggcacacacaagatgtctctgggcttcaccaaggtgcggctgctgcgg
ctgaggaacccctggggccgcgtggagtggtccgggccctggagcgacagctgcccacgc
tgggacatgctcccctctgagtggagagatgccctgcttgtgaaaaaggaggatggcgag
ttctggatggagcttcaggacttcctcacgcacttcaacacggtccagatttgttcactg
agccctgaggtgttgggccccagcccggctggtggcggctggcacattcacaccttccag
ggccgctgggtgcgcggcttcaactccggtgggagtcagcccagcgctgaaaacttctgg
accaatccccagttccggctgacactgctggagccggatgaggaagaggatgaagatgat
gaagagggaccctggggaggctggggagctgcaggggcacggccagcgagaggaggccga
gtccccaagtgcacggtcctactgtcactcatccaacgcaaccgccggtgtctgagggcc
aagggcctcacttacctcactgtgggcttccacgtgttccagatcccggaggagctgctg
ggcctctgggactctccgcgcagccgcgcgctcttaccgggactgctgcgcgccgaccgc
tcggttttctgtgcccgccgcgacgtgagccgacgctgccgcctgccgcccggccactac
ctggtggtgcccagcgcctcgcgcgtgggcgatgaagccgacttcacgctgcgcatcttc
tcggagcgcagccacaccgcagtggagatcgatgacgtgatcagcgcggacctggacgcc
ctccaggccccctacaagcctctggagctggagttggcacagctatttttggagctggct
ggagaggaggaggagctcaatgctctccagctgcagaccttaataagcattgctctggag
cctgctaggaacaacaccaggacctctggagagattggccttaggacctgcgaacagctt
gtgcagtgttttgggcgtgggcaaagattggccctataccacttccaggaactctggggc
catctcctgtcatggcaggccacatttgacaagttcgatgaagatgcttctgggacaatg
aactcctgtgaactgaggctggcactgactgccgcaggcttccacctgaacaaccagctg
acccaggctctcactagccgctaccgaaacagccggctccgcgtggacttcgagcacttt
gtgtgttgtgcagcccggctcacctgcatcttccgccactgctgccaacacctggatggc
ggcgagggggtcgtctgcctgacccacaaacagtggtcggaggtggccaccttctcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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