KEGG   Rattus norvegicus (rat): 308490
Entry
308490            CDS       T01003                                 
Symbol
Ddx18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    308490 (Ddx18)
   03009 Ribosome biogenesis [BR:rno03009]
    308490 (Ddx18)
Spliceosome [BR:rno03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    308490 (Ddx18)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   Helicases
    308490 (Ddx18)
  Pre-60S particles
    308490 (Ddx18)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII SNF2-rel_dom Helicase_C_2
Other DBs
NCBI-GeneID: 308490
NCBI-ProteinID: NP_001006997
RGD: 1549712
UniProt: Q5XHY0
Position
13:complement(35282391..35296038)
AA seq 674 aa
MSQLQMKLLRKKIEKRNAKLRQRNLKLQEASDRSLSQPENGDVPEELGKGGKAKKALKHS
VTAGSAEAQSRGVPEETVENAKVKKSPQKLTILTNGEAAAMPSTDPELKKKKKKKRKIGN
DTEPDPKKAKTEEGTEAREEPEGAGEEPEGAGEEPEDGVKEADDSEVPSLPLGVTGAFED
TSFASLSNLVNENTLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIP
VIELIVKLKFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVHTYGLIMGGSNRSAEVQ
KLLNGINIVVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRILDVGFEEELKQIIKLLPA
RRQTMLFSATQTRKVEDLARISLKKEPLYVGVDDDKEVATVDGLEQGYVVCPSEKRFLLL
FTFLKKNRKKKVMVFFSSCMSVKYHYELLNYIDLPVLAIHGKQKQNKRTTTFFQFCNADS
GILLCTDVAARGLDIPEVDWIVQYDPPDDPKEYIHRVGRTARGLNGRGHALLILRPEELG
FLRYLKQSKVPLNQFDFSWSKVSDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDSHSLK
QIFNVNNLNLPQVALSFGFKVPPFVDLNVSSHDGKLKKRGGGGGFGYQKTKKVEKSKIFK
HISKKPADRRQFSH
NT seq 2025 nt   +upstreamnt  +downstreamnt
atgtcgcagttacagatgaaactcctgcgcaagaagatcgaaaagcggaacgccaagctg
cggcaacggaacctgaagctgcaagaagcatcagacaggagcctgtcacagcctgaaaat
ggagatgtgcctgaagaactaggaaaaggtggaaaagctaaaaaggccctgaagcattct
gtgactgcaggctcagcagaagcacaaagtagaggcgtgcccgaggagactgtggaaaat
gccaaagttaaaaagtcaccccaaaaacttaccattttaaccaatggagaagcagcagca
atgccatctacagatccagaactaaagaagaaaaagaagaagaagaggaaaattggaaat
gacactgagcctgatcccaaaaaagcaaaaactgaagaaggcacggaggctcgtgaggaa
ccagaaggggctggtgaggaaccagaaggggctggtgaggaaccagaagatggtgtgaag
gaggcagatgacagtgaggtgcccagtctgccgttgggagtgacaggtgctttcgaggac
acttcgtttgcttccttgtctaatctcgtcaatgagaacaccctgaaggccatagaagaa
atgggcttcaagcacatgacagagatccagcataaaagtatcaggccacttctggaaggc
agggatcttctggcggctgcgaaaaccggcagcggcaagacccttgctttcctcatccct
gtgatcgagctcattgtcaaattgaagttcatgcccaggaatggaacaggagtcctgatt
ctctctcctaccagagaactggccatgcagacctttggtgtgcttaaggaactgatgaca
caccacgttcacacgtacgggctgatcatgggtggcagtaacaggtctgctgaggtacag
aagcttctcaatgggatcaacatcgtcgtggccaccccaggccggctcctagaccacatg
cagaacacaccagggtttatgtacaagaacctgcagtgtctggttatcgatgaggccgac
cgtatcttggatgttgggtttgaagaagaattaaagcagatcattaaacttttgccagca
cgtaggcaaaccatgctcttctctgccacacaaactcgaaaagttgaagacttggcaaga
atttccctgaaaaaagagccattgtacgtgggtgttgacgacgacaaagaggttgccaca
gtggatggccttgagcaggggtatgttgtctgtccctctgagaagaggttccttctgctt
ttcacattccttaagaagaaccggaagaagaaagtgatggtcttcttttcctcctgtatg
tctgtgaaataccactatgagctgctgaactacattgacctgcctgtcttagccatccat
ggaaagcaaaagcaaaataagcgaacaaccacgttcttccaattctgcaacgcagattcg
ggaatactgctgtgcactgatgtggcggccagagggctggacatccctgaagtggactgg
attgttcagtacgatcctcccgatgaccccaaggagtacattcatcgggtcggcagaaca
gcccgaggcctgaatggaagagggcacgccctgctcatcttgcgccctgaagagctgggt
ttccttcggtacttgaaacaatccaaggttccgttgaatcagtttgacttctcctggtct
aaggtttctgatattcagtctcagctggaaaaactgatcgaaaagaactactttctgcac
aagtctgcccaggaagcgtacaagtcctacatacgggcatatgactcccactctctcaag
cagatcttcaatgtcaacaacttaaatttgcctcaagttgctctgtcttttggttttaag
gtccctccttttgttgatctgaatgtgagcagccacgacggcaagcttaaaaagagaggt
ggtggtgggggattcggctaccagaaaacaaagaaagtggagaagtccaagatctttaaa
cacatcagtaagaagccagcagaccgcaggcagttctctcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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