KEGG   Rattus norvegicus (rat): 308509
Entry
308509            CDS       T01003                                 
Symbol
Garre1
Name
(RefSeq) granule associated Rac and RHOG effector protein 1
  KO
K26671  granule associated Rac and RHOG effector protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    308509 (Garre1)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     308509 (Garre1)
SSDB
Motif
Pfam: DUF4745 Stu2_CTS
Other DBs
NCBI-GeneID: 308509
NCBI-ProteinID: NP_001258162
RGD: 1308428
Ensembl: ENSRNOG00000021129
Vega: OTTRNOG00000001057
UniProt: A0A8J8XFB5
Position
1:complement(95999305..96077641)
AA seq 1060 aa
MYCCSAQDSKMDYKRRFLLGGSKQKVQQHQQYPMPELGRALSAPLASTAPSAPLGSLTTA
GSCHHAMPHSTPIADIQQGISKYLDALNVFCRASTFLTDLFSTVFRNSHYSKAAMQLKDV
QEHVMEAASRLTSAIKPEIAKMLMELSAGAANFTDQKEFSLQDIEVLGRCFLTVVQVHFQ
FLTHALQKVQPVAHSCFAEVVVPEKKNSSSLSGMGHTPELEEAVRSWRGAAEATSRLRER
GCDGRLAGIEVQQLFCSQSAAIPEHQLKELNLKIDSALQAYKIALESLGHCEYAMKAGFH
LNPKAIEASLQGCCSEAEAQQTGRRQTPPQPMQCELPTVPVQIGSHFLKGVSFNESAADN
LKLKTHTMFQLIKEAGCYDGITPRDDLPVTEVLNQVCPSTWRGACKTAVQLLFGQAGLVV
VDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLY
TAVLDLNRWRTGREQALPCIQIQLQRDICDFGNQADLPSGNGSKSSGLQKTFSKLTSRFT
KKVSCTNSGSTHYSKTIFTAGCSEEKAKMLGSNIDTRLQSILNIGNFPRTTDPSQSSQNS
RNPMVNGFLLERRENFLHGDDGKDEKGMNLPTDQEMQEVIDFLSGFNMGQSHQGSPLVTR
RNSTATAMVTEQKTGTMQPQQPSLPLAPPLRPPQAGAHTPLAAQQGLAPQQQSPKQQQPQ
VQFYQHLLQPIGSQQTPPQSRAPGKWGHGSSQHPSQPMAAGLSPLGQWPGISDLSSDLYS
LGLVSSYMDNMMSEVLGQKPQGPRNNTWPNRDQSDGVFGMLGEILPFDPAVGSDPEFARY
VAGVSQAMQQKRQAQHGRRPGNPRGNWPPMDDAHRTWPLPEFFTEGDSLHSGWSGAQGDS
ASSSDETSSANGDSLFSMFSGPDLVAAVKQRRKHSSGEQETSTLPSPPLLTTVEDVNQDN
KTKTWPPKAPWQHPSPLPSTLPSPAAPLYAVASPGSQWNDTMQMLQSPVWAAASDCNTTS
FTYVQTPPQPPPPPAHKAAPKGFKAFPGKAERRPAYLPQY
NT seq 3183 nt   +upstreamnt  +downstreamnt
atgtattgctgcagtgcccaggacagtaagatggactacaagcggcgcttcctgcttggc
gggtccaagcagaaggtgcagcagcaccagcagtacccgatgcctgagctaggccgagca
ctgagtgcgcctttggcgtccacggccccctctgctccgctgggcagtctgaccactgca
ggcagctgccaccatgccatgccccactctactcccattgctgacatccagcagggcatc
tctaagtacctggatgccctcaatgtcttttgccgtgctagtacgttcctcacagatctc
ttcagcaccgtgttcaggaactcacactactcaaaggctgctatgcagctcaaagacgtg
caggagcatgtaatggaagcagccagcaggttgacctcagccataaagcccgagattgcc
aagatgctcatggaactcagtgctggggctgcaaacttcacagatcagaaggaattcagt
ctccaggacattgaggtgttggggcgatgtttcttgacagtggtgcaagtccatttccag
tttttgactcacgccttacagaaagtccagccagtggctcactcttgctttgcagaggta
gttgtgccagaaaaaaagaacagcagtagtctgtctggcatgggccacacacccgaactg
gaggaagctgtgcgatcctggcgaggggctgctgaggcgacatctagattaagagagaga
ggctgcgatggacgactggcgggaatagaagtccaacaactcttttgttctcaaagtgca
gcaattcctgagcaccagctaaaagagctaaacttaaaaattgacagtgctttgcaggca
tataaaatagctttggaaagcttaggccactgtgaatatgcaatgaaagctggcttccac
ctaaacccaaaggccattgaagcaagtttgcagggctgctgtagtgaggcggaagctcag
cagacggggcgaaggcagacacccccacagcctatgcagtgtgagctccccacggtccct
gtgcaaataggatcacatttcctgaagggggtctcctttaatgagtcggctgctgacaat
ctgaagcttaagacgcataccatgttccagctcatcaaggaagcgggctgctacgatgga
atcacacctagggacgaccttcctgtgactgaagtcctgaatcaggtgtgcccgtccacg
tggcggggcgcctgtaagactgccgtgcagctgctgtttggccaggctgggctggtagtt
gttgacacagcacagattgaaaataaagaagcctatgcaccccagatcagtcttgaaggc
tccagaattgtggttcaagtcccatccacatggtgcctgaaggaagaccctgccaccatg
tccctgttgcagagaagcctggatcctgagaagaccctcggtctggtggatgtactctat
acagccgtgctggacctaaaccgctggagaacagggagggaacaggctttaccctgtata
cagatccagctgcaaagggatatctgtgattttgggaatcaggctgacctgccatctgga
aatggaagcaaatcctcaggcctgcagaagactttctccaaactgacatcccggttcaca
aagaaagtgtcatgcaccaactccggcagcacacactattccaaaaccatcttcacagct
ggttgttcagaggagaaggccaaaatgctcggcagtaacattgatacacggttacagagc
attttgaacattggtaactttcctaggactacagacccttcacagtcatctcagaactcc
aggaatccaatggtcaatggctttctcctggagagacgtgagaacttcctgcatggggac
gatggcaaggatgagaagggcatgaacttacccactgatcaggaaatgcaggaagtgata
gattttctctcaggctttaacatgggccagtcccatcaggggtccccactggtgacaagg
cgcaactctactgccactgccatggtgactgagcagaagacaggaaccatgcaaccacag
cagccatcactgccgttggcccctccactacggccaccccaggctggagcacacacgcct
ctggcagcccagcaaggtctggctcctcagcagcagtccccaaagcagcagcagccccaa
gtccagttctaccagcacctgctgcaacccattggatcacagcagacgccaccccagtcc
cgggcgcctggtaaatggggacatggctcatctcagcacccatcacagcccatggcagcg
ggtctgtctcctcttggtcagtggcctggcatatctgatctcagctctgacttgtacagc
ttgggtctagtgagcagctatatggacaatatgatgtcagaagttttgggacagaagcca
cagggacctaggaataacacctggccaaatcgtgaccaaagtgatggagtctttggaatg
ctgggagagattttgccttttgatcctgcagtgggctcagacccagagttcgcacgctac
gtggcaggagtgagccaggcaatgcagcagaagcggcaagcccaacatggccgccggcca
ggcaacccccggggcaactggccgcccatggatgatgctcatcggacctggcctttgcca
gagttctttacagaaggggacagcctgcacagtggctggtcaggtgctcagggagactcg
gccagctccagtgatgagacctcttcagccaatggggacagcctgttttccatgttttca
gggcctgaccttgttgctgctgtcaaacagagaaggaaacacagcagtggagagcaggag
accagcacactgccctcaccacctctcctgaccacagtggaggatgtgaaccaggataac
aaaaccaaaacgtggccacccaaagcaccatggcagcacccttccccgctgcccagcacg
ctgcccagcccagctgcaccactctatgcagttgccagtcctggcagccagtggaatgac
accatgcagatgctgcagtcccctgtgtgggctgcagccagtgactgcaataccacctcc
ttcacctatgttcagacaccaccacagcccccacctccaccagcacataaggcagcaccc
aagggcttcaaggccttccctgggaaggctgaacggaggccagcctatttgccccagtac
tga

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