KEGG   Rattus norvegicus (rat): 308579
Entry
308579            CDS       T01003                                 
Symbol
Cpt1c
Name
(RefSeq) palmitoyl thioesterase CPT1C
  KO
K19524  carnitine O-palmitoyltransferase 1, brain isoform [EC:2.3.1.21]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno00071  Fatty acid degradation
rno01212  Fatty acid metabolism
rno03320  PPAR signaling pathway
rno04148  Efferocytosis
rno04152  AMPK signaling pathway
rno04714  Thermogenesis
rno04920  Adipocytokine signaling pathway
rno04922  Glucagon signaling pathway
rno04936  Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:rno00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    308579 (Cpt1c)
 09130 Environmental Information Processing
  09132 Signal transduction
   04152 AMPK signaling pathway
    308579 (Cpt1c)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    308579 (Cpt1c)
 09150 Organismal Systems
  09152 Endocrine system
   04922 Glucagon signaling pathway
    308579 (Cpt1c)
   04920 Adipocytokine signaling pathway
    308579 (Cpt1c)
   03320 PPAR signaling pathway
    308579 (Cpt1c)
  09159 Environmental adaptation
   04714 Thermogenesis
    308579 (Cpt1c)
 09160 Human Diseases
  09167 Endocrine and metabolic disease
   04936 Alcoholic liver disease
    308579 (Cpt1c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rno03029]
    308579 (Cpt1c)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.21  carnitine O-palmitoyltransferase
     308579 (Cpt1c)
Mitochondrial biogenesis [BR:rno03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    308579 (Cpt1c)
SSDB
Motif
Pfam: Carn_acyltransf CPT_N
Other DBs
NCBI-GeneID: 308579
NCBI-ProteinID: NP_001030097
RGD: 1305384
Ensembl: ENSRNOG00000026163
UniProt: F1LN46 Q3KR63
Position
1:complement(104579297..104593824)
AA seq 801 aa
MAEAHQASSLLSSLSSDGAEVELSSSVWQEIYLSALRSWKRNLWRVWNDFLAGVVPATPL
SWLFLFSTIQLACLLQLDPSLGLMEKIKELLPDWGGQHHQLQGLLAAAVFASCLWGTLIF
TLHVALRLLLSHHGWLLEPHGTMSSPTKTWLALVRIFSGRHPRLFSFQRALPRQPVPGAQ
ETVRKYLESMRPVLRDDAFDSVVALANDFLRLQAPRLQLYLQLKSWCASNYVSDWWEEFV
YLRSRGSLVNSTYYMMDFLYVTPTPLQAARAGNAVHTLLLYRHLLNRQEIPPTLLMGMRP
LCSAQYERMFNTTRIPGVEKDYLCHLQDSQHVAVFHQGRFFRVGTHSSNGLLSPRALEQQ
FQYILDDPSPACPLEEHLAALTAAPRSMWAQVRESVKTHAATALETVEGAAFFVSLDSEP
AGLTRENPAASLDTYAHTLLTGQGHDRWFDKSFTLIVFSNGKLGLSVEHSWADCPVAGHL
WEFTLATECFQLGYATDGHCKGHPDPALPKPQRLQWDLPKQIQPSISLALRGAKTLSGNI
DCHVFPFFHFGKSFIKGCHVSSDSFIQLVLQLAHFRDRGQFCLTYESAMTRLFLEGRTET
VRSCTREACQFVRAMENKERTDQQCLALFREAVDKHQALLKAAMSGQGIDRHLFALYIMS
RLLHMQSPFLTQVQSQQWLLSTSQIPVQQTHLFDVHNYPDYVSSGGGFGPAHDHGYGVSY
IFMGENAISFHISSKQSSTETDSHRLGQHIEDALLDVASLFQAGQQFKRQFTGLGESSGW
KYSNLSCKTVDPNIPKSSTNL
NT seq 2406 nt   +upstreamnt  +downstreamnt
atggctgaggcacaccaggcctcgagcttgctgtcttcactcagttccgacggggcagaa
gtggagctcagctcctcagtgtggcaggagatttacctctctgccctacgctcctggaaa
aggaatctctggcgtgtctggaatgactttcttgctggtgtggtcccggcaacgcccctc
agctggcttttcctcttcagtacaatccagcttgcttgtctcctccagctggacccttcc
ctaggactgatggagaagattaaagagttgctgccagactggggcggacagcaccaccag
ctccaggggctcctggcagcagcagtctttgcctcgtgtttgtggggaaccctgatcttc
acacttcatgtggctctgaggctcctgctgtcccaccacggctggcttctggaacctcat
ggcaccatgtcctcacccacgaagacctggctggcattggtcagaatcttttcggggagg
cacccgaggctcttcagctttcaacgtgcgctcccgcggcagccagtgcccggagcgcaa
gagaccgtgcgcaagtacctagagtccatgcgccctgtgctccgagacgacgctttcgac
agcgttgtggcgctggcaaacgacttcctgaggttgcaggcgccacgactccagctctat
ttgcaactcaagtcctggtgcgcttccaactacgtcagcgactggtgggaagagtttgtg
tacctgcgttctcgaggctcgctggttaatagcacctactacatgatggattttctgtat
gtcacccccacaccactgcaggcagcccgtgcgggcaatgccgtgcataccctgctcctg
tatcgccaccttctgaaccggcaggagatcccaccgaccttgctgatggggatgcgcccc
ttgtgctccgcccagtacgagaggatgttcaacactacacggattccaggggtggaaaaa
gactacctttgtcacctccaagacagccaacatgtggctgtcttccaccagggcagattc
ttccgtgtagggacccactcttccaatggcctgctgtccccacgggccctggaacagcag
ttccagtacatcctggatgacccctccccagcctgtccccttgaggaacatctagctgct
ttgactgccgctcccaggagtatgtgggcccaggtacgtgagtctgtgaagacccatgcg
gccactgccctggagactgtggaaggggctgccttctttgtgtccctggattctgagccc
gcgggactgaccagagagaaccccgcagcttccctggacacctatgcccacactctgctg
actggccaaggccatgaccgttggtttgacaaatccttcaccctcatcgtcttctccaac
gggaagctgggcctcagcgtggagcactcatgggctgactgccctgtcgcgggacattta
tgggagttcaccctggccacagagtgcttccagttgggatatgccacagatggccactgt
aaggggcaccccgaccctgccctgccgaagccccagcgcctgcagtgggaccttccaaag
cagatccagccgtccatctctctggccctgaggggagccaagaccttgtctggcaatatt
gactgccatgtcttccccttcttccacttcggcaagagcttcatcaaaggctgtcatgtc
tcttcagacagtttcatccagctggtcctgcagctggcccacttccgggacaggggtcaa
ttctgcctgacttatgaatcagccatgacccgactgtttctggaaggcaggacggagacg
gtgaggtcttgcactagagaggcctgccaatttgtgagagccatggaaaacaaggagagg
acagaccaacagtgccttgccctgttccgggaagccgtggacaagcaccaggccctgctg
aaggcagcaatgagtgggcaagggatcgaccgtcacctcttcgcactgtacatcatgtcc
cggcttctccacatgcagtcgcccttcctgacccaggtccagtcgcagcaatggcttctg
tctaccagccagatccctgtgcagcagacacacctgttcgatgtccacaattacccggat
tatgtttcctctggaggtggatttgggcctgcccatgaccatgggtatggcgtctcgtat
atcttcatgggggaaaacgcaatcagcttccacatctccagcaagcaatcaagcacagaa
acagactcacaccggctggggcagcacattgaagatgccctgttggatgtagcctccctg
ttccaggctggacagcaattcaagcgccagttcacagggctcggggagagttcaggttgg
aaatacagcaatctctcctgtaagactgtggaccccaatatccccaaatcctccaccaac
ttgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (9)   
   KEGG PATHWAY (9)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (18)   
   RefSeq(nuc) (8)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (55)   

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