KEGG   Rattus norvegicus (rat): 308596
Entry
308596            CDS       T01003                                 
Symbol
Ush1c
Name
(RefSeq) harmonin
  KO
K21877  harmonin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    308596 (Ush1c)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   308596 (Ush1c)
SSDB
Motif
Pfam: USH1C_N PDZ PDZ_6 PDZ_2 Baculo_LEF5_C FapA Hid1
Other DBs
NCBI-GeneID: 308596
NCBI-ProteinID: NP_997686
RGD: 1303329
Ensembl: ENSRNOG00000021149
UniProt: A6JBB6 F7FHE4
Position
1:complement(105831719..105880082)
AA seq 548 aa
MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKG
GQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPEEPL
KWQYVDQFVSESGGVRGGLSSPGNRTTKEKKVFISLVGSRGLGCSISSGPIQKPGIFVSN
VKPGSLSAEVGLETGDQIVEVNGIDFTNLDHKEAVNVLKSSRSLTISIVAGAGRELFMTD
RERLEEARQHELQRQELLMQKRLAMESNKILQEQQEMERQRRKEIAQKAAEENERYRKEM
EQISEEEEKFKKQWEEDWGSKEQLILPKTITAEVHPVPLRKPKYDQGVEPADHLDGSTKK
QRQQDFRKYEEGFDPYSMFSPEQIAGKDVRLLRIKKEGSLDLALEGGVDSPVGKVVVSAV
YEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPKE
YDDELTFF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggaccggaaggtggcccgagaattccgacacaaggtggattttctcattgaaaatgac
gcggagaaggactatctttatgacgtgctgcggatgtatcaccagaccatggacgtggct
gtgctcgtgggagacctgaagctggtcatcaatgagcccaaccgcctgccactcttcgac
gccatccggcccctgatcccactgaagcaccaggtggagtatgaccagctgacaccccga
cgctccaggaaactgaaggaggtgcgtttggaccgtctgcacccagagggccttggcctc
agcgtgcgtggaggcctggaatttggctgtgggctcttcatctcccatctcatcaaaggt
ggccaggcagacagcgttgggctgcaggtaggggacgagattgtccggatcaacggctat
tccatctcctcctgcacccacgaggaagtcatcaacctgatccgcaccaagaagactgtg
tccatcaaagtgagacacatcggcctgatccctgtgaagagctcccccgaggagcccctc
aagtggcagtatgtggatcagttcgtgtcggaatctggaggtgttcgaggtggcttgagc
tcacctggcaatcgaacaaccaaggagaagaaggtgtttatcagtctagtaggttctcgg
ggcctgggctgcagcatttccagtggccccatccagaagcctggcatcttcgtcagcaac
gtgaaacctggttccctgtctgcagaggtggggttagagacaggagaccagattgtggaa
gtcaatggcatcgacttcaccaacctggaccacaaggaggccgtgaatgtcctgaagagc
agccgcagcctgaccatctccattgttgctggagctggccgggagctgtttatgacagac
cgggaacggctggaagaggcacggcagcatgagctgcagcggcaagagctcctcatgcag
aagcggctggccatggagtccaacaagatcctccaggagcagcaggagatggagcgtcag
aggagaaaggaaatcgcccagaaggccgctgaggagaatgagagataccggaaggagatg
gaacagatctcggaggaggaagagaagtttaagaagcagtgggaagaagactggggttca
aaggaacagctcattctgcctaaaaccatcaccgcagaggtgcacccggtgccgcttcgc
aagcccaagtatgatcagggagtggagcctgctgaccacttggatggaagcacgaagaag
cagagacagcaggatttccgaaaatatgaagaaggctttgatccttactccatgttctcg
ccagaacaaattgcagggaaggatgtccggctgctgagaatcaagaaggaggggtcttta
gacttggccttggaggggggagtggactcccccgtggggaaggtggtcgtctctgctgtt
tatgaaggaggagctgcagagcggcatggtggcgttgtgaaaggggatgagatcatggcc
atcaacggcaagatcgtgacggactacaccctggctgaggctgaggctgccctgcagaag
gcctggaatcagggcggggactggatagaccttgtggttgccgtctgtccccccaaggaa
tacgatgatgaactaaccttcttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

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