KEGG   Rattus norvegicus (rat): 308738
Entry
308738            CDS       T01003                                 
Symbol
Chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
  KO
K20091  chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    308738 (Chd2)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    308738 (Chd2)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 Helicase_C CHD1-like_C Chromo ResIII HDA2-3 Myb_DNA-binding
Other DBs
NCBI-GeneID: 308738
NCBI-ProteinID: NP_001100993
RGD: 1310056
Ensembl: ENSRNOG00000012716
Vega: OTTRNOG00000000629
UniProt: A6JBX9 A0A096MJY0
Position
1:complement(136597993..136726874)
AA seq 1834 aa
MMRNKDKSQEEDSSLHSNASSHSASEEASASDSGSQSESEQGSDPGSGHGSESNSSSESS
ESQSESESESAGSKSQPVLPEAKEKPASKKERIADVKKMWEEYPDVYGVRRSNRSRQEPS
RFNIKEEASSGSESGSPKRRGQRQLKKQEKWKQDPSEDDQEQGSSAESEAEQKKVKARRP
IPRRTVPKPQVKKQPKIQRGKRKKQESSDDDDDDDEAPKRQTRRRAAKNVSYKEDDDFET
DSDDLIEMTGEGVDEQQDNSETIEKVLDSRLGKKGVDLNPFAATGASTTVYAVEANGDPS
GDFDTEREEGEIQYLIKWKGWSYIHSTWESEESLQQQKVKGLKKLENFKKKEDEIKQWLG
KVSPEDVEYFNCQQELASELNKQYQIVERVIAVKTSKSALGQTDFPAHSRKPAPSNEPEY
LCKWMGLPYSECSWEDEALIGKKFQSCIDSFHSRNNSKTIPTRECKALKQRPRFVALKKQ
PAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLY
GPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYEWIHSQTKRLKFNALI
TTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSL
KELWSLLHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKV
EQILRVEMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIRAPED
SERETGQEVLQSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYP
FQRLDGSIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQN
DLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLEN
NSGRSNSNPFNKEELTAILKFGAEDLFKEIEGEESEPQEMDIDEILRLAETRENEVSTSA
TDELLSQFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRI
RSSTKKAQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTD
AEIRRFIKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELVHNSCVSAMQEYEEQLK
ENASEGKGPGKRRGPTIKISGVQVNVKSIIQHEEEFEMLHKSIPVDPEEKKKYCLTCRVK
AAHFDVEWGVEDDSRLLLGIYEHGYGNWELIKTDPELKLTDKILPVETDKKPQGKQLQTR
VDYLLKLLRKGLEKKGTVTSGEEAKLKKRKPRVKKENKAPRLKDEHGLELSSPRHSDNPS
EEGEVKDDGLEKSPTKKKQKKKENKENKEKPVSSRKDREGDKEKKKSKDKKEKVKGGDAK
SSSKSKRSQGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDKGL
NVQEQLEHTRSCLLKIGDRIAECLRAYSEQEHIKLWRRNLWIFVSKFTEFDARKLHKLYK
MAHKKRSQEEEEQKKKDDTLGGKKPFRPEASGSSRDSLISQSHASHNLHPQKPHLPASHG
PQMHGHPRDTYSHPNKRHFSNADRGDWQRERKFNYGGGNNAPWGGDRHHQYEQHWYKDHH
YGDRRHMDAHRSGSYRPNNMSRKRPYEQYNSDRDHRGHRDYYDRHHHDSKRRRSDDFRPQ
NYHQQDFRRMSDHRPTMGYHGQGPSDHYRSFHTDKLGEYKQPMPTLHTALSDPRSPPAQK
SPHDSKSPLDHRSPLERSLEQKNNPDYNWNVRKT
NT seq 5505 nt   +upstreamnt  +downstreamnt
atgatgagaaataaggacaaaagccaagaggaggacagttcgctacacagcaatgcatcg
agtcattcagcctctgaagaagcttcggcttcagactctggcagtcagtctgaaagtgag
cagggcagcgatcccggaagtggacatggcagcgagtccaatagcagttcggaatcttct
gagagccaatcagagtctgagagtgaatcagcaggttccaaatcccagccagtccttcca
gaagccaaagagaagcctgcctctaagaaggaacggatagctgatgtgaagaagatgtgg
gaagaatatcctgatgtttatggggttaggaggtcaaatcggagcagacaagaaccatca
cgatttaatattaaggaagaggcaagtagcgggtctgagagtgggagtccgaaaagaaga
ggccagaggcagctgaaaaaacaagaaaaatggaagcaggacccctcagaagacgatcag
gaacagggaagcagtgcagagagtgaggcagagcaaaagaaagtaaaagctagaagaccc
atccctagaagaacagtgcccaaacctcaagttaaaaagcaacctaagattcagcgtgga
aagaggaaaaaacaagagtcttcagatgatgatgacgacgatgatgaagctcccaaaagg
cagactcgacgaagagctgctaaaaatgtgagttacaaagaagatgatgactttgagact
gattcagatgatctcattgaaatgactggagaaggagttgatgaacagcaagataatagt
gaaactattgaaaaggtcttagattcaagactgggaaagaaaggagttgacttgaatcct
tttgcagccactggagcgtctaccactgtgtatgctgttgaagctaatggagatcctagc
ggtgactttgacacggagagggaagaaggtgaaatccaataccttatcaagtggaagggc
tggtcgtatattcacagcacgtgggagagtgaagaatccttacaacaacagaaagtaaag
ggcctaaaaaaactggagaatttcaagaagaaagaggacgagattaagcaatggttaggg
aaagtttctcctgaagatgttgaatatttcaattgccaacaggagctggcatcagagttg
aataaacagtatcagatagtagaaagagtaatagctgtgaagacaagtaaatctgcactg
ggccaaacagattttccagctcacagtcggaagccagcaccttcaaatgagcctgaatat
ctgtgcaagtggatgggactgccctactcagagtgcagctgggaagatgaagccttgatt
ggaaagaaattccagagttgtatcgacagcttccacagtcgaaacaactctaaaaccatt
cccacaagagaatgcaaggcactaaagcaaagaccacggtttgtagctttgaagaagcaa
ccagcatacttaggaggagagaatctggagctccgagactatcagctggagggtctcaac
tggcttgctcactcctggtgcaaaagtaacagcgtaatccttgctgatgaaatgggccta
ggaaagaccatccagaccatatcgtttctctcctacctgttccatcagcaccagctctac
gggccctttctcatagttgtccccttatccacccttacctcatggcagagagagtttgag
atctgggcaccggaggttaacgtcgtggtttacataggtgacctgatgagcaggaacacg
ataagggaatatgagtggattcattctcaaaccaaaaggttgaagttcaatgcacttata
acaacatatgagatcctattaaaagataagacggtgctgggaagtattaactgggccttc
ctgggagtagatgaagcccatcggttgaagaatgatgactctttgttgtataaaactctg
attgatttcaagtccaaccataggctactgatcacgggcacccctcttcagaattccctc
aaggaactttggtccttgctgcactttattatgccggagaagtttgagttctgggaagat
tttgaagaagaccatggaaaggggagagagaatggctaccagagtcttcataaggtacta
gagccttttcttcttcgaagagtcaaaaaagatgtggagaaatcccttcctgccaaagtg
gaacagattctcagggtggagatgtcagcccttcagaaacagtattataaatggatcctg
accaggaattacaaggctcttgccaaaggaacgagaggcagcacgtccggcttccttaat
attgtgatggagctgaagaagtgctgcaaccactgctacctgatcagagctcccgaggac
agcgaaagggagacgggccaggaggtccttcagtctctaattaggagcagtgggaagctg
attctgttagacaaactgttgacaagactccgagaaaggggaaacagagtccttatcttc
tctcagatggtgaggatgttggatatcctggctgagtacctgactatcaaacattatcct
ttccagcgcctggatggttctatcaagggagaaatccgaaaacaggcattggatcacttc
aatgcagatgggtctgaggacttctgcttcctgctctccacacgggctggcggcctggga
atcaacttggcttcagcggacacagttgtcatctttgactctgactggaacccccagaac
gacctgcaggcacaagcccgagcacatagaatcggtcagaagaagcaggtgaatatttac
cgcctggttacgaaggggactgtggaagaggaaatcatagaaagggccaaaaagaagatg
gtgttggaccatctggtgattcagcgcatggatactactggcaggacagttcttgaaaac
aactcagggagatccaactcaaatccttttaataaagaagagctgacagctattttgaaa
tttggagcagaggatctcttcaaagaaattgaaggagaggagtcagagcctcaggaaatg
gatatagatgaaattttgcgtttagctgaaaccagagagaatgaagtgtcaactagtgcg
acagatgagctgctatcacagtttaaggttgccaactttgcaacaatggaagatgaagag
gagctagaagagcgtcctcacaaggactgggatgaaatcattcccgaagagcagaggaaa
aaagtggaggaggaagagcggcagaaggagctggaagaaatttatatgctgcctcggatt
cgcagttctactaaaaaggctcagaccaatgacagtgattctgacactgagtctaagagg
caggcccagaggtcttcagcttctgagagtgagacggatgactctgacgatgataagaag
ccaaagcgcagagggcgcccccggagtgtgcgcaaagacctcgtggaaggcttcacggat
gccgagatcagaaggtttatcaaggcttataagaagtttggtctccctcttgaaaggcta
gagtgcatagcacgtgatgctgagctagttgataagtccgtggcagacctgaaacgccta
ggggagctggttcataatagctgtgtgtcagcaatgcaggagtatgaggaacagctgaaa
gaaaatgccagcgaaggaaaaggaccaggcaagagaagaggcccgacaatcaagatctct
ggggttcaggttaatgtgaagtccattatccaacatgaagaagagtttgagatgctgcat
aaatctatccctgtggaccctgaggaaaaaaaaaaatactgcttaacctgccgagtcaaa
gcagcacattttgacgtcgagtggggcgtggaggatgattctcgtctgttgcttggaatc
tatgaacatggctatggaaattgggagctaattaagacagaccctgagctaaagctaact
gataaaattctaccagtggagacagataagaagcctcagggaaagcagctgcagacccga
gtggactacttgctgaaactgctcaggaagggtctggagaagaagggcaccgtgaccagc
ggggaagaggccaaattaaagaagcggaagcctcgagtaaagaaggagaacaaagcaccc
aggctgaaggatgagcatgggctggagctttcgtctcctcgacactctgacaacccctct
gaggaaggggaagtgaaggatgatggtttagaaaaaagtccaacgaaaaaaaagcagaag
aagaaagagaacaaagagaacaaagagaaaccagtgagttctcggaaggacagagaagga
gacaaagaaaagaagaagtccaaggacaagaaagaaaaggttaaaggtggtgatgccaag
tcttcaagtaaatcaaagcgatctcagggtcctgtccacattacagcaggaagtgagcct
gttcccattggggaggatgaagatgatgatctggaccaggaaaccttcagcatttgtaag
gagaggatgaggcctgtgaagaaggcactgaaacagttggacaaacccgacaagggactc
aatgtgcaagaacagctggaacacaccaggagctgcctgctgaagattggagaccgcata
gctgagtgccttagagcttattcagagcaggagcacatcaaattgtggaggaggaaccta
tggatttttgtttccaagtttacagaatttgatgcacggaaactacataagttatataag
atggctcataagaaaagatctcaagaagaggaggaacaaaagaagaaagatgatacgctt
ggtggtaagaaaccatttcgaccagaggcctcgggctccagccgggactctctgatatct
cagtcccatgcctcacacaaccttcatcctcagaagcctcatttgcctgcctcccatggc
ccacagatgcatggacatccaagagatacctacagtcaccccaacaagagacactttagt
aatgcagatcgaggagactggcagagggaaagaaagttcaactatggcggcggtaataat
gccccctgggggggcgaccggcaccatcagtatgagcagcactggtataaggaccaccac
tatggtgaccggagacatatggatgcccaccgttctggaagctaccgacccaacaacatg
tccagaaagagaccatatgagcagtacaacagtgaccgagaccaccggggacacagagac
tattatgacaggcaccatcatgactccaagcggaggaggtcagatgactttaggccccag
aattaccaccagcaggatttccgacgaatgtctgaccacagacccaccatgggttaccat
ggccagggaccctcagaccattaccgctctttccacacagacaaattgggggaatacaaa
caacccatgcctacattgcacaccgcgctctcagaccctcgctccccccctgcccagaaa
tctccccatgattctaagtcacccttggatcacaggtctcctttggagagatcactagaa
cagaaaaacaacccagattataactggaatgttcggaagacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (15)   
   UniProt (2)   
   RefSeq(pep) (13)   
DNA sequence (22)   
   RefSeq(nuc) (16)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (55)   

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