KEGG   Rattus norvegicus (rat): 308790
Entry
308790            CDS       T01003                                 
Symbol
Mex3b
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    308790 (Mex3b)
   04121 Ubiquitin system [BR:rno04121]
    308790 (Mex3b)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     308790 (Mex3b)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     308790 (Mex3b)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    308790 (Mex3b)
SSDB
Motif
Pfam: KH_1 zf-C3HC4_3 zf-C3HC4 KH_2 Prok-RING_4 zf-RING_5 zf-P11
Other DBs
NCBI-GeneID: 308790
NCBI-ProteinID: NP_001178555
RGD: 1306790
Ensembl: ENSRNOG00000025142
UniProt: D3ZFL6
Position
1:146264319..146268554
AA seq 576 aa
MPSSLFADLERNGSGGGGGGGGGGGGSGSGGGETLDDQRALQLALDQLSLLGLDSDEGAS
LYDSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVV
TGRKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVG
LVVGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGII
ELTDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLG
SASTDSYFGGGTSGSTAATSRLADYSPPSPALSFAHNGNNNNNGNGYTYTAGEASVPSPD
GGTELQPTFDPAPAPPPGTPLLWAQFERSPGGGSAAPVSSSCSSSASSSASSSSVVFPGG
GASSTPSNANLGLLVHRRLHPGTSCPRLSPPLHMATGAGEHHLARRVRSDPGGGGLAYAA
YANGLGTQLPGLPSSDTSGSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPC
GHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggcgggggaggc
ggcggcgggggaggcggcagtggcagcggcgggggagagactctggatgaccaaagagcc
ctgcagcttgcgctcgatcagctctccctgttgggactggacagtgatgagggcgcctct
ctgtacgacagcgaaccgcgcaagaagagcgtgaacatgaccgagtgcgtgccggtaccc
agttccgaacacgtcgcggagatcgtagggcggcaaggttgtaaaatcaaagctttgagg
gcgaagaccaacacttacatcaagaccccagttcgcggggaggagcctgtctttgttgtg
acgggcaggaaggaggatgtggctatggctcggagggagatcatctctgccgcagagcac
ttctccatgatccgagcctctcgtaacaagaacaccgctctcaacggcgctgtgcccggg
ccgcccaatctgccgggacagaccactatccaagtgagggtgccataccgcgtggtaggg
ctcgtggtggggccaaagggcgccacgatcaagcgcattcaacagcagacacatacatat
attgtgacacccagccgagacaaggagccggttttcgaggtgaccgggatgccagagaac
gtggatcgcgctagagaggagatcgaagctcacatcgcgctgcgcaccggtggcatcatc
gagctgacagatgagaacgacttccatgccaatggcacagacgtgggctttgatctgcat
cacgggtccggcgggtccgggccgggcagcctctggagcaaacccaccccaagcatcact
cctacccctggtcgcaagcccttctccagctatcgcaacgacagctccagctcgcttggc
agcgcatccacagactcttacttcggaggtgggaccagcggcagcacagcggccacttca
cgcctggcggactacagccctcccagccctgcactcagctttgcccacaatgggaacaac
aacaacaacggcaatggttacacctacacagcgggggaagcctcagtaccttccccggat
ggaggtactgagcttcagcctactttcgacccagctcctgccccaccacctgggacaccc
cttctctgggcccagttcgagcgttcgcctggaggtggatctgcagcaccagtatcctct
tcctgctcttcctcggcatcctcatctgcctcgtcgtcctctgtggtctttcccgggggt
ggcgccagcagcacaccctctaatgccaatctggggctgctggtgcaccgccgactacac
ccgggcaccagctgcccgcgcctgtctccacccttgcacatggccacgggggcgggagag
caccaccttgctcgccgcgtgcgcagcgacccaggcggtggaggcctggcctacgccgcc
tatgctaatgggctagggacgcagctccctggcctgccctcgtcggacacttcgggctcc
tcctcgtcctctagctcctcctccagctcttcctcctcttcctccgggctgaggcgcaaa
ggcagccgcgactgctctgtgtgcttcgagagcgaagtgatcgccgcgctggtgccctgt
ggccacaacctcttctgcatggagtgtgccaaccgcatttgtgagaagagcgagcccgag
tgtcccgtttgccacacggcggtcactcaggccatccgcatcttttcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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