KEGG   Rattus norvegicus (rat): 308839
Entry
308839            CDS       T01003                                 
Symbol
Rsf1
Name
(RefSeq) remodeling and spacing factor 1
  KO
K11657  remodeling and spacing factor 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    308839 (Rsf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    308839 (Rsf1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   RSF complex
    308839 (Rsf1)
SSDB
Motif
Pfam: WHIM1 PHD WSD
Other DBs
NCBI-GeneID: 308839
NCBI-ProteinID: NP_001414397
RGD: 1311245
Ensembl: ENSRNOG00000024194
Position
1:161303596..161426326
AA seq 1448 aa
MATVAAAAAAAVAAMAPPGCPGSCPNFAVVCSFLERYGPLLDLPELPFPELERVLQAPPP
DIGHGEVPKELVELHLKLMRKIGKSVTADRWEKYLIKICQEFNSTWAWEMEKKGYLEMSV
ECKLALLKYLCECQFDDNLKFKNIINEEDADTMRLQPIGRDKDGLMYWYQLDQDHNVRMY
IEEQDDQDGSSWKCIVRNRNELAETLALLRAQIDPVLLKNSSQQEDPSRESPTLEDEETK
KDEETPKQEASRGNEKTEADERSMDSRKRSAANALEGPAVKIEKADEKELVKLPVIVKLE
KPVPETEDKKIIREESDSFKENVKPIKVEAKECRVDPKDLKGSLERLGSQEPERADFGSN
IKSSQDITEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPVKGHLCKSATPTKECLKD
DVKQEEETCKRVSTISALSHEGKQLMNGEMNDDKVTASLKTEQLETQLCHTKEDSSSIPA
KDGSAGLEGSGVECLNSVLTSTKTSELEKEVSLGKAVDGSASDVESHSQKGRGEEPGPPN
MDMPLEPSEKTTDLSLKSTLSATESCPTKIEEKAPKSKGENHTAGIECLEKVEKAKKTSV
DKDIQRLSPIPEEVVRGPLESEESGLCEVAETPLPLEMTGAKEKQTSEKKGVDCLSRGSS
EGQSLENASPDILRENSESSRVEMAKLDNAQTSGVEDTSQTKGSVQKNKCKYKLVSEGNS
TASENTEITSERKKEGIKLTIRISSRKKKPDCPPQIVDSESKEEKAGKEEEKTSVGRTLR
RSPRISRPTAKVAEIRDQKADKKRAEGEEGVEGETTSLQTADKKEHLKKAEKDTNSKASK
VKPKGKVRWTGSRTRGRWKYSSNDESEGSESDKSSAASEEEEGKESEEAVLPDDDEPCKK
CGLPNHPELILLCDSCDSGYHTACLRPPLMIIPDGEWFCPPCQHKLLCEKLEEQLQDLDV
ALKKKERAERRKERLVYVGISIENIIPPQEPEFSEDQEEKKKDAKKSKANVLERRSTRTR
KCISYRFDEFDEAIDEAIEDDIKEADGGGVGRGKDISTITGHRGKDISTILDEERKENKR
PQRAAAARRKKRRRLNDLDSDSNLDEEESEDEFKISDGSQDEFVVSDENPDESEEEPPSN
EDSDTDFCSRRLRRHPSRPMRQSRRLRRKTQKKKYSDDDEEEEEEEEESEENSRDSESDF
SDDFSDEFVETRRRRSRRNQKRQINYKEDSESDGSQKSLRRGKEIRRVHKRRLSSSESEE
SYMSKNSEDDELTKESKRSIRKRGRSTGEYSEADEEEEEEGKPSRKRLHRIETDEESCDS
AHGDADQPARESQASVLPSEQESSKKPYRIESDEEEDFENVGKVGSPLDYSLVDLPSTNG
QSPGKAIENLMGKATEKSQTPKDNGTASANLAPNGTSGGQEVGAPEEDEDELLRVTDLVD
YVCNSEQL
NT seq 4347 nt   +upstreamnt  +downstreamnt
atggcgacggtggcggcggcggcagcggcggcggtagcggcgatggctcctccgggctgc
ccgggttcgtgccccaacttcgccgtagtctgctccttcttggaacgctacgggccgctg
ctggacctgcccgagttgccgttcccagagctggagcgggtgctgcaggcgccgccgcca
gacatcggccacggagaagtaccaaaagaattggtggagctgcatttgaagttaatgagg
aagattggcaaatccgttacagcagacagatgggaaaaatacttgatcaagatatgccaa
gagtttaacagtacctgggcatgggagatggagaagaaaggctatcttgaaatgagtgtt
gaatgcaaactagcactcttaaagtatctctgtgagtgtcagtttgatgacaatcttaaa
ttcaagaatataattaatgaggaggatgctgatactatgcgtctccagccgattgggaga
gacaaagatggcctcatgtattggtaccagttggatcaagaccacaatgtgagaatgtac
atagaagagcaagatgatcaagatggctcttcgtggaaatgcattgtcagaaatcgaaac
gagttggctgagacccttgcactcctgagagcacaaattgatcctgtactattgaaaaac
tccagccaacaggaagacccttcccgggaaagccccaccctagaggatgaggagactaaa
aaagatgaagaaacacctaaacaagaggcatcaagaggaaatgaaaagacggaagctgat
gagcggtcaatggattccagaaaacgttctgcggccaatgctctagaaggaccagctgtg
aaaattgagaaagcagatgaaaaggagcttgtgaaactgccagtcattgtaaagctagaa
aagcctgtgccagaaactgaggacaaaaagattatcagagaggaaagtgattccttcaag
gaaaatgtcaaacccattaaagtagaagcaaaggaatgcagagtggacccaaaagatctc
aaaggcagcttggagcggctgggttcacaggagcctgagcgagcagactttggtagcaac
atcaaatcttctcaagacatcacagagaaatctactgaggaaacagagaagcttaaaaat
gatcagcaagccaagataccactgaagaaacgtgaaattaagctgagtgatgattttgac
agtccagtcaaaggacatttatgtaagtcggctactccaacaaaagagtgtttgaaagat
gacgtaaaacaagaggaagagacttgtaaacgggtctctaccatcagtgctttgagtcat
gaagggaaacagcttatgaatggagaaatgaatgatgacaaggtaactgcaagtcttaag
acagaacaactggaaacacagctttgtcatacaaaggaagacagctctagcatccctgct
aaggacggaagtgctggcctggagggaagtggtgtggagtgcttaaattctgtcctaacg
agcacaaagacaagtgaacttgagaaggaggtatctctagggaaggctgtagatggttct
gcatctgacgtagagagccacagtcagaaaggaaggggagaggagcctgggcctccaaac
atggacatgcctctggagccttccgagaaaaccacagatctctctttaaaatccactttg
tctgccactgaatcctgccctacaaaaattgaagagaaggcccccaaaagtaagggtgag
aaccacacggcaggcatagaatgcctggaaaaggtggagaaggccaagaagacctctgtt
gataaggacatacaaaggttgagtccaataccagaagaagttgtaaggggtcctctagaa
tcagaagagtcaggtctttgcgaagtggctgaaactcctctccctcttgagatgactgga
gccaaggagaaacagacttcagaaaaaaaaggtgtagactgtctaagtagaggttcaagt
gaaggccagtcccttgaaaatgcaagcccagacattctaagagagaactctgagtcctcg
agggtggaaatggctaagctggacaatgcccagacctctggcgtggaggatacttctcaa
acaaagggctctgtgcaaaaaaacaaatgtaaatacaagttagtttccgaaggcaacagt
actgcgtcagaaaatacagagatcacctctgaaaggaagaaggaaggcatcaagttgaca
attagaatatcaagtcggaagaagaagccagattgtcccccccaaattgtagactctgaa
agcaaggaagagaaggcagggaaggaagaagagaaaacaagcgtgggtcgaactttaaga
aggtctccaagaatatctaggcccacagcgaaagtcgctgagatcagagaccagaaagcc
gacaagaaaagagctgaaggagaagagggagtggaaggggagacaacatctttgcagaca
gcagacaagaaggaacacttgaagaaagccgagaaggatacaaattctaaagccagcaag
gtaaaacccaaaggcaaagttcgatggactggctctcggacacgtggcaggtggaaatac
tccagcaatgatgagagcgaagggtccgagagtgacaaatcctctgccgcctcggaagag
gaggaaggaaaggagagtgaagaagcagtccttccagatgacgatgaaccctgcaaaaag
tgtggccttccgaatcacccagaactaattcttctgtgtgattcttgtgacagtggatac
catacagcctgcctccgccctcctctgatgattatccctgatggagaatggttctgccct
ccttgccagcataaactactgtgtgaaaaattagaagaacagttgcaagatttggatgtt
gccttaaagaagaaagagcgtgcagagcggaggaaagagcgcttggtgtatgtcggtatc
agtattgaaaacatcattcctccacaagagcctgagttttctgaagatcaagaagaaaag
aaaaaagatgcaaaaaaatccaaagcaaatgtacttgaaaggagatcaacgagaacaagg
aagtgtataagctacagatttgatgaatttgatgaagccattgatgaagccatcgaagat
gatattaaagaggctgatggaggaggagttggccgaggaaaagatatctccaccatcaca
ggtcaccgtgggaaagatatttctactattttggatgaggaacgaaaggaaaataaacgg
ccccagagggcagctgctgctcgaaggaagaaacgccggcgacttaatgatctggatagt
gatagcaacttagatgaagaagagagtgaggatgaattcaagatcagtgatggatctcag
gatgagtttgttgtgtctgatgaaaatccagatgaaagtgaagaagagccaccatccaat
gaggacagtgacactgacttctgtagccgaagactgaggcggcatccttctcggccaatg
aggcaaagcaggcgtttgcggagaaagacccaaaagaagaagtactccgatgacgatgaa
gaagaagaagaagaagaagaagaatctgaagagaatagtagagactctgaaagtgacttt
agcgatgattttagtgacgagtttgtagaaacccggcgaaggcgatcaagaaggaaccag
aaaagacaaattaactacaaagaagattcggaaagtgatggttcccagaaaagtctccga
cgtggtaaagagatccggcgagttcacaagcgcagactttccagctcagagagcgaagag
agctacatgtccaagaactctgaagatgatgaactaacaaaagaatctaagcgatccatt
cggaaacggggccgaagcacaggtgaatattcagaagcagatgaggaggaggaggaggaa
ggcaaaccatcccgcaagcggctacaccggatagagacagacgaggagagctgtgacagt
gctcatggggatgcagaccagcctgcccgtgagagccaggccagtgtcctaccctcagag
caagagagcagcaagaagccgtatcggatagagagtgatgaagaagaggactttgaaaac
gtgggcaaagtagggagcccgttggactacagcctagtagacttgccttccaccaatgga
cagagccctggcaaggccattgagaacttgatgggcaaagcaactgaaaagtcccagacc
cccaaggacaatggcacagccagtgcaaatctagcccctaatgggacaagtggtggacag
gaggtgggggcaccagaagaggatgaagatgagcttttgcgagtgactgaccttgttgat
tatgtctgtaacagtgaacagttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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