KEGG   Rattus norvegicus (rat): 308905
Entry
308905            CDS       T01003                                 
Symbol
Ubqln3
Name
(RefSeq) ubiquilin-3
  KO
K04523  ubiquilin
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04141  Protein processing in endoplasmic reticulum
rno05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    308905 (Ubqln3)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    308905 (Ubqln3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    308905 (Ubqln3)
   03051 Proteasome [BR:rno03051]
    308905 (Ubqln3)
Membrane trafficking [BR:rno04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    308905 (Ubqln3)
Proteasome [BR:rno03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    308905 (Ubqln3)
SSDB
Motif
Pfam: ubiquitin STI1-HOP_DP Rad60-SLD UBA YukD Ubiquitin_5 Dsc3_N Rad60-SLD_2 HOIP-UBA
Other DBs
NCBI-GeneID: 308905
NCBI-ProteinID: NP_001101013
RGD: 1304920
Ensembl: ENSRNOG00000023833
UniProt: B1WBT8
Position
1:complement(168016508..168019201)
AA seq 655 aa
MAKSGEALPQGSPAPVQDSQLIRVTVKTPKDKEDFSVVDTCTIRQLKEKISHRFKAHPNQ
LVLIFAGKILKDPDSLAQCGVRDGLTVHLVIKMQRRTTGTECPAPPVSTPGPNPLELPQP
NSAYPVDGSPSFSLGVLTGLSGLGLTSGSFSDQPGSLMWQHMSVPELVAQLVDDPFIQGL
LSNTGLMRQLVLDNPHMQQLIQQNPEIGHILNNPEIMRQTMEFLRNPSMMQEMMRSQDRA
LSNLESIPGGYNVLRTMYTDIMDPMLNAVQEQFGGNPFATATTASTTTTSSQPSRTENCD
PLPNPWTSTCGVSGSRQGRQPGDQDTSESRNRLPSFLGNIGLFDYLQQLHETSQALGSYL
QGTVPTPSSSQETPLSGNRVPPNLPPSPKPGSGQPLPKDSVAIKGKSSCPAFLRHSSENS
TGQGGSLHDSGKSSTGPSTGLPNLTSQIGDNANRSPFVSTPSSLISPTPGAPESPWLPPT
GYPRSLRSALTNQVPRMQNELHQQLPLLLHLQTAMTNPRVMQALLQIEQGLQILATEAPR
LLLWFMPCLAGLSGVIGGTESREGVVMSEDPRPTPTSQISLVQGSAELGFHSSPFLQVLQ
ALASTNPQQLQLEAHFRVQLEQLRAMGFLNLEANLQALIATGGDVDAAVEKLRKS
NT seq 1968 nt   +upstreamnt  +downstreamnt
atggccaaaagtggagaggctctaccacagggcagcccagcgccagtacaggattcccag
ctcatccgggtgacagtgaagacacccaaggacaaggaggatttctcagttgtagacacg
tgtaccatccggcagttaaaggaaaagatatcacaccgctttaaggcacatccaaatcag
ctggtcctgatctttgcgggaaaaatcctcaaggaccctgactcattggcacagtgtgga
gttcgagatggcctcacagttcacctcgtcatcaagatgcagcgtcggaccacaggcact
gagtgcccagcaccaccagtctccactccaggcccaaatcctctagaactccctcagcca
aattctgcttaccctgtggatgggtctccttctttcagcttaggggtcctcacaggcctc
agtgggttgggtctgacctcaggtagcttctctgaccagccaggctcactgatgtggcag
cacatgtcagtgcctgaacttgtggctcagctggttgatgaccccttcatccagggtctg
ctgtccaacacgggcctaatgcgccagctggttcttgataatcctcacatgcagcagctg
atccagcagaaccctgagattggtcatattcttaataaccccgagatcatgcggcagaca
atggagtttttacgtaacccttccatgatgcaggagatgatgcgtagccaggatcgagca
ctcagtaacctggagagcatccctggtggctacaatgtgctgcgtactatgtacacagat
attatggatcccatgcttaatgcggtacaggagcagtttggtggcaatccttttgctact
gctactactgctagtaccaccaccaccagcagccaaccctcaaggacagagaactgtgac
cctcttcccaatccctggacttccacttgtggggtttcaggtagcagacaagggagacag
cctggggaccaggatacatctgagagtagaaataggcttccaagctttctgggtaacata
ggactctttgattatctccaacagttacacgagacttctcaggccctgggatcctacctg
cagggtactgtgccaactccaagttcaagccaggaaacaccactatcaggaaacagagtt
cctccaaatttacccccatcccctaaacctgggtcaggccaacctctgcccaaagactca
gtagcaatcaagggaaagtcgtcctgcccagctttcttgagacattcatctgagaacagt
actggacaaggtggaagcctacatgattcagggaagagctctactggcccgagtactggc
ctgcccaatcttacctctcagataggggataatgccaacagatccccatttgtttctaca
ccatcatcccttatatcacctactcctggagccccagaatctccctggcttcctccaaca
ggttacccaagatctctgagatcagctttaacaaatcaagtccctcgaatgcagaatgag
ctacatcaacagctcccactactgctgcaccttcagacagccatgacaaatccccgtgtc
atgcaagccttgctgcagattgagcagggtctgcagattctggctactgaagcaccccgc
ctcctgctctggttcatgccttgcctagcagggttgagtggtgtaataggaggtacagaa
tctagggaaggtgttgttatgtctgaggatccccgaccaaccccaacttctcagatttcc
ttagtacagggttctgcagagctaggtttccattcctccccctttctccaggtgttgcaa
gcgttagctagtaccaatccccagcagctacaactggaggctcacttccgggtacagctg
gagcaactacgggctatgggctttctgaatctggaagccaatctccaggccctcattgct
acagggggtgatgtagatgctgctgtggagaaactgaggaagtcttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (9)   
   Pfam (9)   
All databases (32)   

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