KEGG   Rattus norvegicus (rat): 308968
Entry
308968            CDS       T01003                                 
Symbol
Rbbp6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
  KO
K10624  E3 ubiquitin-protein ligase RBBP6 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    308968 (Rbbp6)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     308968 (Rbbp6)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  U-box type E3
   308968 (Rbbp6)
SSDB
Motif
Pfam: DWNN zf-CCHC_2 U-box zf-C3HC4_2 zf-C3HC4_3 zf-CCHC zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 308968
NCBI-ProteinID: NP_001414116
RGD: 1311964
Ensembl: ENSRNOG00000012806
Position
1:186934563..186966852
AA seq 1827 aa
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADSDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTTKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKTLVGPPPPSYTCFRCGKPGHYIKNCPTNGD
KNFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAGRLLFHKLGTMGHK
QIDTYLWNRGDVYGAAATQITHLREAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLI
CKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAVNN
FKNETGYTKRLRKQLPPPPPPISAPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSAHST
PSISSLTSNPSSLAPSVPGNPSSAPAPVPDITATVSISVHSEKSDGPFRDSDNKLLPAAA
LASEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTTGPVRINAARPGGG
RPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPP
PPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANISTPWVSSGVQ
TAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRR
SFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKS
RNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPTKRNVPQGETEREYFNRYRE
VPPPYDIKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKGYAVGAQPRPSANREDFS
PERLLPLNIRNSPFTRGRREDYVAGQSHRNRNLGGNYPEKISTRDSHNPKDNPKSKEKES
ENVPGDGKGNKHKKHRKRRKGEESESFLNPELLETSRKSRESSGIDETKTDALFVLPSRD
DATPVRDEPMDAESITFKSVSEKDKREKDKPKVKSDKTKRKSDGSATAKKENVLKPSKGP
QDKVDGDREKSPRSEPPLKKAKEEATKVDSVKPSSSQKDEKVTGTPRKAHSKSAKEHQEA
KPVKEEKAKKDCSKDIKSEKPASKDEKAKKPEKNKLLESKGEKRKRKTEEKSVDFESSSM
KISKVEGTEIVKPSPKRKMEGDVEKLERTPEKDKSASSTTPAKKIKLNRETGKKIGNAEN
PSTTKEPSEKLESTSNKIKQEKVKGKARRKVAGTEGPSSTLVDYTSTSSTGGSPVRKSEE
KTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDDVRTTQPIQSVG
KPSSIIKNVTTKPSATVKCTEKENEQSEKIQKLTKEVSHEVIQHELRSSKGSVSSEKGRA
KDRDHSASEKDNPDKRKTSIQPDKESTVDRLSEQGHFKNLSQSSKETRTSEKHESVRGSS
NKDFTPGRDKKTDYDSRDYSSSKRRDERSELTRRKDSPPRSKDSLSGQKSKLREEKDLPK
KGTELKKSNSSPPRDKKPHDHKASYETKRSCEETKSVDKNAGKEREKHAAEASRNGKESS
GSKLPSIPNPPDPPMEKELAAGQIEKSTIKPKPQLSHSSRLSSDLTRETDEAAFEPDYNE
SDSESNVSVKEEEAVASVSKDLKEKATEKATESLNVATASQPGADRSQSQSSPSVSPSRS
HSPSGSQTRSHSSSASSAESQDSKKKKKKKDKKKHKKHKKHKKHKKHAGVDGDVEKSQKH
KHKKKKAKKNKDKEKEKDDQKVKSVTV
NT seq 5484 nt   +upstreamnt  +downstreamnt
atgtcctgtgtgcactataaattttcctctaaactcaactacgacaccgtcacctttgat
gggctccatatctccctctgcgacttaaagaagcagattatggggagagaaaagctgaaa
gctgccgatagcgatctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgcactcattcctaaaaattcatctgtaattgtcagaagaattcctattggaggtgtt
aagtctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaactacaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaggaagacaaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaaactctagtaggcccgccacctccgtcttat
acctgttttcgttgtggtaaacctggtcattatattaagaattgcccaacaaacggggat
aagaactttgaatctggtcctaggatcaaaaagagcactggaattcctagaagttttatg
atggaagtgaaagatcctaacatgaaaggcgcaatgcttacgaacactggaaaatacgca
ataccgactatagacgctgggagactcctctttcacaaattgggaacaatggggcataag
caaattgatacttatttgtggaatcgtggtgatgtctatggagcagctgcaacacaaata
acacacctaagagaggcctatgcaattgggaagaaagagaaaccacccttcttaccagag
gagccatcgtcatcttcagaagaagatgatcctatcccagatgagctcttgtgcctcatc
tgcaaagacattatgactgatgccgttgtcattccctgctgtggaaacagttactgtgat
gagtgtataaggacagcactcctggagtcagatgagcatacatgtccaacatgtcatcaa
aatgatgtttctcctgatgctttaattgccaacaagtttttacgacaggctgttaataac
ttcaaaaatgaaactggctatacaaaaagactacgaaaacagttacctccacccccacct
ccaatatcagcgccaagaccactcattcagcggaacctgcaacctctgatgagatctccc
atatcaagacagcaggatcctctgatgattccagtgacatcttcctcagctcactcaact
ccctctatatcttcattaacttcaaatccatcctccttggctccttccgtgcctggcaac
ccatcttctgccccagctccagtgcctgatataactgcaacagtatctatatcagtccac
tcagaaaaatccgatgggccttttcgggattctgataataaactattaccagctgccgcc
cttgcatcagaacactcaaagggagcgtcctcaattgctattactgctcttatggaagaa
aagggttaccaggtgccagtccttgggactccatctttgttgggacagtcattattgcat
ggacagttaatacccacaactggtccagtaagaataaatgctgctcgtccaggtggtggt
cgaccaggttgggaacattccaacaaacttgggtacctggtttccccaccacagcaaatt
agaagaggagaaagaagctgttacagaagtataaaccgcgggcgacaccacagcgaacga
tcacagaggactcaaggcccatcactaccagcaactccagtctttgtgcctgtcccacca
cctcctttgtatccacctcctccccatacacttcctcttcctccaggtgtacctccccca
cagttttctcctcagtttcctcctggccagcctccaccagcaggatatagtgtccctcct
ccagggttcccgccagctcctgccaatatatcaacaccttgggtatcatcaggagtgcag
actgcccattcaaataccatccctacaacacaagcacctcctttgtccagggaagaattc
tatagagagcagcgacgactaaaggaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtctaaatctccctatagtgggtcatcgtattcaagaagttcatacact
tactcaaagtcaaggtctggctcaacacgttcacgctcttactctcggtccttcagccgc
tcacactctcgctcctattcacggtcacccccataccccaggagaggcagaggcaagagc
cgcaattaccgttcacggtccagatctcatggataccatcgatctaggtcaaggtcacct
ccctatagacgataccactcacggtcgagatctcctcaagcatttaggggacagtctccc
actaaacgcaatgtacctcaaggagaaacagagcgtgagtattttaatagatacagagaa
gttccacccccttatgatatcaaagcctattatgggcggagtgtcgactttagagaccca
tttgagaaagaacgctaccgggaatgggagaggaaataccgagagtggtatgagaagtac
tacaaagggtacgcagtgggagcccagcctagaccctcagccaacagagaggacttttct
ccagagagactcttacctcttaatatcagaaattcaccctttacaagagggcgcagagaa
gactatgttgctggacaaagtcatagaaatagaaatctaggtggcaactatccagaaaag
atttcgacaagagatagtcacaatccaaaagataatccaaagtcgaaagagaaggagagt
gaaaatgttccaggagacggcaaaggaaacaagcataagaaacacaggaaacgaagaaag
ggggaagagagtgagagcttcctgaacccagagctactggaaacttctagaaaatccagg
gaatcctcagggatcgatgaaacaaagacagatgcactgtttgttctcccaagcagagac
gatgctacacctgttagggatgaaccaatggatgcagaatctatcaccttcaaatcagta
tctgaaaaagacaagagagaaaaggataaaccaaaagtaaaaagtgacaagaccaaacgg
aaaagtgatgggtctgctacagccaagaaagaaaatgttttaaaaccttctaaaggaccc
caagacaaggtagatggagaccgtgaaaaatctcctcggtctgaacctcctctcaaaaaa
gccaaagaggaggctacaaaggtcgactctgtaaaaccttcctcatctcagaaggatgag
aaggtcactggaacccctagaaaagcccactccaaatctgcaaaagaacaccaggaggca
aagccagtcaaagaggagaaggcaaaaaaggactgttccaaagacatcaagtcagaaaag
ccagccagtaaggacgagaaggccaagaagcctgagaaaaataaactacttgaaagcaag
ggagagaaacgaaagagaaaaaccgaagagaagagtgtagattttgagtcctcttcaatg
aaaatctctaaagtggaaggaacagaaatagtgaaaccatcaccaaagcggaaaatggaa
ggtgatgttgaaaagctggaaaggaccccagaaaaggacaagagtgcatcatcaactacc
ccagccaaaaaaattaaactcaatagagaaactggaaaaaaaattggaaatgcagaaaat
ccatctactacaaaagaaccctctgaaaaactggagtcaacatctaacaaaatcaaacag
gaaaaagtcaagggaaaggccagacggaaagtagctgggacagaaggccccagctccacg
cttgtggactacaccagtacaagctcaactggaggcagtcctgtgaggaaatctgaagaa
aagacagatacaaagagaacagtcattaaaactatggaggaatataataatgataataca
gcgcctgcagaagatgttataattatgattcaggttcctcagtccaaatgggataaagat
gactttgaatctgaagaagaagatgatgttagaaccacacagcctatacagagtgtaggg
aaaccatccagtattataaaaaatgtcactactaagccatcagctacagttaagtgcact
gagaaagaaaatgagcagtctgagaaaattcagaagcttaccaaggaggtcagccatgag
gtgatacagcatgagctcaggagctcaaagggctctgtgtccagtgagaaggggagagcc
aaggaccgggatcactcagcgtcagagaaggacaaccctgacaagaggaagaccagtatc
cagccagacaaggagagcactgtggaccgcctgagtgagcaaggacattttaagaatctc
tctcagtcttccaaagagaccaggacttcagagaagcatgagtctgttcgtggctcctca
aataaagacttcactcctggtagagacaagaaaacggactacgacagcagagattattcc
agttccaaacgaagagacgaaagaagtgaattaacaagaagaaaagactctcctcctcgg
agtaaagattctttatctggacagaaaagtaagctgagggaggagaaagatttacctaaa
aaggggacagagttaaaaaaaagtaattctagtcccccaagagacaaaaagcctcatgat
cataaagcctcctatgaaaccaaacgctcatgtgaagagacaaagtctgtagataaaaat
gctgggaaggaacgggagaagcatgctgctgaagcttctcgaaacgggaaagagtccagt
ggcagcaagttgccatctatacccaacccgcctgaccctcccatggaaaaggagctggct
gccgggcagattgagaagagcaccatcaagccaaaaccccagttgagtcattcctcaagg
ctttcctctgatctcactagagagactgatgaggctgcttttgaacccgactataacgag
agcgatagtgagagtaatgtgtctgtgaaggaggaagaagctgttgccagtgtctccaag
gacttgaaagagaaagcaacagagaaagcaacagagagcttgaatgtagcaacagccagc
cagccaggtgcagacaggagccagagccaaagtagccccagtgttagtccaagtagaagt
catagcccttccggcagccagacccggagccacagcagcagtgccagctcggcagaaagc
caagacagcaaaaagaagaaaaagaagaaagacaagaaaaagcacaagaagcataaaaag
cacaagaagcacaagaagcatgcaggcgtggacggtgatgtggagaagagccagaaacat
aaacacaagaagaagaaggcgaagaaaaacaaagacaaggagaaggagaaagatgaccaa
aaagtgaaatctgtcactgtgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (11)   
   Pfam (11)   
All databases (34)   

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