KEGG   Rattus norvegicus (rat): 308976
Entry
308976            CDS       T01003                                 
Symbol
Kdm8
Name
(RefSeq) bifunctional peptidase and arginyl-hydroxylase JMJD5
  KO
K10277  [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    308976 (Kdm8)
Enzymes [BR:rno01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.73  [protein]-arginine 3-hydroxylase
     308976 (Kdm8)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Other ribosome biogenesis factors
   308976 (Kdm8)
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 308976
NCBI-ProteinID: NP_001032273
RGD: 1304823
Ensembl: ENSRNOG00000015180
UniProt: Q497B8
Position
1:189444527..189459507
AA seq 414 aa
MSEDTTEPLVGPSTLWKDLRALLPDTEEELKLDLSEKVDRSMATLLRQALGLFYEGRWQK
CLQASEAVLDYSWEKLNTGPWRDVDKEWRRVYSFGCLLKTLCLCQAPQKATAVAEALRVC
DMGLLMGAAILGDILLKVATVLQTHLLPRKQPACGPHQDQPATKKAKHDASSTPDVVLDR
EVPRLRCPPLQHFKKHFLVPGRPVILEGVADHWPCMKKWSLQYIQEIAGCRTVPVEVGSR
YTDEDWSQTLMTVNEFIHKYILSEAKDVGYLAQHQLFDQIPELKQDISIPDYCCLGNGEE
EEITINAWFGPQGTISPLHQDPQQNFLVQVLGRKYIRLYSPQESEAVYPHETHILHNTSQ
VDVENPDLEKFPKFTEAPFLSCILSPGDTLFIPAKYWHYVRSLDLSFSVSFWWS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcagaggacactacagagcccctagtggggcccagcaccctctggaaggacctcagg
gcgctcctgccagacacagaggaggagctgaagctggatctcagtgagaaggtggacagg
agcatggctacgctgctacggcaggctttgggtctgttctatgaaggccgttggcagaag
tgcctgcaggccagtgaggctgtcctggactactcctgggaaaagctcaacactggtccc
tggcgagatgtagacaaggaatggcgccgggtatattccttcggctgcctcctgaagacc
ctgtgcctgtgccaggcaccacagaaggccactgctgtggctgaagcactgcgggtgtgt
gacatgggcctgttgatgggggcagccatccttggggacattcttctcaaagttgctaca
gtcctccagacacatctgctccctagaaagcagcctgcctgtggccctcaccaggatcag
cctgctaccaagaaggcaaagcatgatgccagctcaactcctgatgtggtattagatcgg
gaagtgcccaggcttcgctgcccacctctgcagcacttcaagaagcattttctagttcct
gggagacctgtgatcttggaaggtgtggctgaccactggccgtgcatgaagaagtggagt
ctacagtacatccaggagattgctggctgccgcactgtccccgtggaagtgggttcaaga
tacacagatgaagactggtcccagactctcatgacagtcaatgagttcatccacaaatac
attctgagcgaggcaaaggatgtcgggtaccttgctcaacaccagctgttcgaccagatc
ccagagttgaagcaggacatcagcatccccgattactgttgcctgggcaatggagaagag
gaagagatcactatcaatgcctggtttggtcctcaaggaaccatctccccattgcatcag
gacccccagcagaacttcctggtccaggtgttaggaaggaagtacatccggctgtattct
ccgcaagagtctgaggcagtgtaccctcatgagacacacattcttcataacaccagccag
gttgatgtggaaaaccccgacctagagaagttccccaagttcaccgaggccccgtttctg
tcctgcattctgtccccaggagacaccctctttatacctgctaagtactggcattacgtg
cgctccctggacctgagcttctctgtcagcttctggtggtcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (9)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (33)   

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