KEGG   Rattus norvegicus (rat): 309041
Entry
309041            CDS       T01003                                 
Symbol
Thumpd1
Name
(RefSeq) THUMP domain-containing protein 1
  KO
K06963  tRNA acetyltransferase TAN1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    309041 (Thumpd1)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    309041 (Thumpd1)
SSDB
Motif
Pfam: THUMP DUF1796 CHGN RNase_P_Rpp14
Other DBs
NCBI-GeneID: 309041
NCBI-ProteinID: NP_001009688
RGD: 1308854
Ensembl: ENSRNOG00000014946
UniProt: Q5M943
Position
1:complement(183510242..183516282)
AA seq 353 aa
MAATAQQSPPSVGGKRKGKSQFLPAKRARRCDAGGPRQLEPGLQGILITCNMNERKCVEE
AYSLLNEYGDDMYGPEKFIDKDQQPSGSEGEDDDAEAALKKEVGDIKASTEKRLRRFQSV
ESGANNVVFIRTLGIEPEKLVHHILQDMYKTKKKKTRVILRMLPVSGTCKAFLEDMKKYA
ETFLEPWFKAPNKGTFQIVYKSRNNSHMNREEVIKELAGIVGSLNSENKVDLTNPEYTVV
VEIIKAVCCLSVVKDYVLFRKYNLQEVVKSAKDSRPPPKLGNGKEAQLEPGSKLSQNDPP
KGKNNQQAAPESSEELGQTVPGSETQAGSEGGAKPEPESQGSEGPKAKENELS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggcggccacagcccagcagtcccctccgtcggtcggcggaaagcgcaaaggcaaatcc
cagttcctgccggccaagcgggcccgacgctgtgacgcaggcggaccgcggcagctggag
cccggcttgcagggcatcctcatcacctgcaacatgaacgagcgcaagtgcgtggaggag
gcctacagcctgctcaacgagtatggcgacgacatgtacggacccgaaaagtttatagac
aaggaccagcagccctctggaagtgagggagaagatgatgatgcagaggctgccttgaaa
aaagaagttggtgacattaaggcttctacagagaagaggctgagaagattccagtcagtg
gagagcggagcaaataatgtagttttcatcaggacacttgggatagaacctgagaaatta
gtgcatcatattctccaggatatgtacaaaaccaagaaaaagaagacacgggttattctg
cgaatgttacctgtctcaggtacatgtaaagcatttttagaagatatgaaaaaatatgca
gaaacatttctggaaccctggtttaaagccccaaacaaagggacatttcagattgtatac
aaatctcgaaataacagccatatgaatagagaagaagtcattaaagagttggcaggaata
gtaggcagcctcaattcagaaaacaaagtggatctcactaatccagaatacacggtggta
gtagaaatcatcaaagctgtgtgttgcctgagtgttgtgaaagattatgtgctgttccga
aaatacaacctccaagaagtagtgaagagtgcaaaggactcacggcctcccccaaagctg
ggaaatggcaaagaagcacaactggaacctggtagtaagttgagtcaaaatgatcccccc
aaagggaaaaacaaccaacaggcagcaccggagagtagcgaggagctggggcagacagtg
ccagggtccgaaacccaggcagggagtgaaggaggagctaaacctgaacctgaaagtcaa
ggctcagaaggacccaaggcaaaggaaaatgagctctcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (18)   

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