KEGG   Rattus norvegicus (rat): 309082
Entry
309082            CDS       T01003                                 
Symbol
Clrn3
Name
(RefSeq) clarin-3
  KO
K23841  clarin
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    309082 (Clrn3)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   309082 (Clrn3)
SSDB
Motif
Pfam: Claudin_2 DUF4064 Sulf_transp Ninjurin Orf78 TMEM154 Pox_EPC_I2-L1 DUF4381
Other DBs
NCBI-GeneID: 309082
NCBI-ProteinID: NP_001014048
RGD: 1305043
Ensembl: ENSRNOG00000028288
UniProt: Q6AYR5 A6HX61
Position
1:complement(199748863..199764486)
AA seq 226 aa
MPTTQKTLMFLSGFLTSLGSVVVICSILGTQAWITSKIFFTDTISNGTIAITYGLFRGTS
SQDLNEGLQELDKNFEVLGILSNSSQKSLHVVVIILLILSLAASLLSSMFTFYNSISNPY
QTFLGPMGVYTWNGLSASFVFLTMVLFVGNVDSNHLSEKLSQTLYPDAINKKTTHTYGYS
FWLILLVILLNIVTVVIIIFYQKARYHQKQEQRKPVEYAPRDGILF
NT seq 681 nt   +upstreamnt  +downstreamnt
atgccaaccacacagaaaacgttgatgttcctgtctggctttctcacaagcctgggctca
gttgttgtcatctgttctattctggggacacaggcatggatcaccagcaagattttcttc
acagacactatctccaatggtaccattgctatcacctatgggctttttcgtggtacgagt
agtcaagatttgaacgaaggccttcaagagctggacaaaaactttgaagttttagggata
ttgagcaattcttcccagaagtccctgcatgtggtggtcatcatactcctgatcctgagt
ctggcagcttccttgctgagctcaatgttcaccttctacaacagcatcagcaacccttac
cagacgttcctgggacctatgggagtctacacctggaatggactcagtgcatcctttgtg
tttctgaccatggttctgtttgtggggaatgtcgactccaaccatctctccgaaaagctg
tcccagacactttatccagatgccattaacaagaaaacaacccacacttatggatactca
ttttggctcatcctgcttgtcatcctactgaatattgtcaccgtggtcatcatcattttc
tatcagaaggcccgataccatcagaagcaggagcagaggaagccagtggagtacgctccg
agggatggcattttattctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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