KEGG   Rattus norvegicus (rat): 309194
Entry
309194            CDS       T01003                                 
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    309194 (Taf6l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    309194 (Taf6l)
   03036 Chromosome and associated proteins [BR:rno03036]
    309194 (Taf6l)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     309194 (Taf6l)
   Coactivators
    SAGA/TFTC/STAGA complex
     309194 (Taf6l)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     309194 (Taf6l)
    STAGA complex
     309194 (Taf6l)
    TFTC complex
     309194 (Taf6l)
    SAGA complex
     309194 (Taf6l)
    SLIK complex
     309194 (Taf6l)
SSDB
Motif
Pfam: TAF6_C TAF
Other DBs
NCBI-GeneID: 309194
NCBI-ProteinID: NP_001101045
RGD: 1310123
Ensembl: ENSRNOG00000019419
UniProt: A0A9K3Y8B8 B5DF37
Position
1:complement(215101266..215113888)
AA seq 623 aa
MHSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEVLPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRGGLGGRGYRPAEDLPWDSLLLQESPPGGGSEP
GFGSGLLLPSGVAGSEDPSSLTLADIYRELYSFFGDSLATRFGTGQPAPTAPRPPGDKKE
PATTPDSVRKMPQLTASAVVSPQGDESPCGGTLAAANATSESRPLPRVHRARGAPRQQGP
GAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLP
MIGRTGRPARRWALSDYSLYLPL
NT seq 1872 nt   +upstreamnt  +downstreamnt
atgcacagttccactggagccatgtcagaaagagaagagaggcggtttgtggagatccct
cgggagtcagtccggctcatggcagagagcaccgggctggagctgagtgacgaagtggcc
gctctgcttgctgaagatgtgtgctaccgtctcagagaggccacccagaacagctctcag
ttcatgaaacacaccaaacgaaggaagctgacagtggaggacttcaacagggctctcagg
tggagcagtgtggaggctgtgtgtggctatgggtcccaggaggtgttgcccttgcgccct
gcaagggagggggaactctactttccagaggatcgagaagtgaacctggtggagctggca
ctggccactaacatccccaagggctgtgcagagacagccgtcagagttcatgtctcctat
ctggatggcaagggaaatctggcacctcagggatcagtgcccagtgcagtgtcttcactg
acagatgacctgctcaaatactaccagcaagtgacacgggctgtgctgggcgatgatcca
cagctgatgaaggttgccctccaggacctgcagacaaactccaagattgcagcactcctg
ccttactttgtttatgtggtcagtggggtaaaatctgtaagccacgacctggagcagctg
caccgactactgcaggtagcacggagcctgatacggaacccacacctctgcttggggccc
tatgtccgatctctggtgggcagcgtgctttactgtgtcttggagccactggctgcctcc
atcaaccctttgaatgaccactggactctgcgagatggggctgccctcctactcagccac
atcttctggactcatggagaccttgtaagtggcctctatcagcagattctgctctccctg
cagaaggtcctgacagaccctgtacggcctctctgttctcactatggggcagtggtaggg
ctgcatgctctaggctggaaggcagtggagcgagtcctctacccacatctgcctacttac
tggacaaacttgcaggctgtgctggatgactattccgtatctaatgcccaggtcaaagca
gatgggcacaaagtatatggagctattctggtagccgtagagcgactacttaagatgaaa
gcccaggcagcagaacccaaccgcggtggccttggcgggagagggtaccgtcctgcggag
gacctgccttgggacagccttctcttacaagagtctccccctgggggcggttccgaacca
ggttttgggtctggcctcctgctgccgtcaggggttgcgggatcagaggatccttcttcc
ttgaccctagcagacatctaccgtgaactatactccttctttggtgacagcctggccacc
cgcttcggcactggccagcctgctcccacggccccacgaccgcccggagacaagaaggag
cctgcaactaccccggattcagtgcggaaaatgccgcagctgactgccagcgccgtggtc
agccctcagggtgacgaaagcccatgcggtggaaccctcgccgccgccaacgccacctcg
gagagcaggccgctacctcgtgtacaccgggcgcgaggcgctcctcgtcagcagggtccc
ggcgcgggaacgcgagacgtcttccagaagagccgcttcgcgccccgcggcgcccctcac
ttccggtttataatcgcagggcgtcaggccgggcggcgctgccgcgggcgcctctttcaa
actgctttccctgcaccgtatgggcccagtcccgcgtcccgctacgtgcagaagttgccc
atgatcggccgtactggccgcccggcccgccgctgggcgctctcagactattcgctgtac
ctgccgctatga

DBGET integrated database retrieval system