KEGG   Rattus norvegicus (rat): 309256
Entry
309256            CDS       T01003                                 
Symbol
Fan1
Name
(RefSeq) fanconi-associated nuclease 1
  KO
K15363  fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    309256 (Fan1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    309256 (Fan1)
Enzymes [BR:rno01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.1  phosphodiesterase I
     309256 (Fan1)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     309256 (Fan1)
SSDB
Motif
Pfam: FAN1_TPR Fan1_SAP VRR_NUC FAN1_HTH DUF4363 DUF1771 zf-TRAF
Other DBs
NCBI-GeneID: 309256
NCBI-ProteinID: NP_001178562
RGD: 1566323
Ensembl: ENSRNOG00000023985
UniProt: D3ZVU2
Position
1:complement(127327098..127356807)
AA seq 1020 aa
MMSQKSSPAQKRPRKSLSTGKTTKSQSHSITSYFNSVPPAKLACSICHKMVPRYDLIRHL
DESCANNGEIVQNEPAQAGLINSTVPTSDLPSTPLEDMTPQKLSPPKRRLISAQCGSKLG
VRQQTSPYFKKALVCKNQNKLPNQSVEIRSLGSLSSKLSRRYVKAKKSLSKNEGLASHCP
PTSPSPPGPSLVDNCPEMDNKDEILNSSQKENIYSCAPLEEETASEQKVKSSKRMGDGSQ
KASGGEPALTPASPEQAPTLLSSDLTLVNNTDSSSGDALEQEGAGRVGVGVDEQLAACSH
EEVQMTVDAEVGTLVSGGAESNSPADNDDDDASTWSNNPELREAGSALKRQRACSPLEQG
ASCVPSVTAQPQPSHPYYLRSFLVVLQAILENEEDMKLFDDQEKGVIAKFYQLSASGQKL
YVRLFQRKLTWIKVSKLEYEEIASDLTPVVEELKNLGFLQTESELQELSDVLELLSAPEL
KALAKTFHLVSPGGQKQQLVDAFLKLARQRSVYTWGKTQPGIRAVILKRAKDLAGPSLRV
CKGPRAVFCRLLLLFSLTDTMEDEEAACGGQGQLSTVLLVNLGRMEFPQYSISRKTQIFR
DREDLIRYAAAAHMLSDISAAMASGNWEEAKELSQIAKRDWDQLKSHPSLRYHEALPLFL
RCFTVGWIYTRISSRAVEVLERLHMYEEAVKELENLLAQKVYCPDSRGRWWDRLALNLHQ
HLKRLEEAIWCIKEGLADPQVRTGHRLSLYQRAVRLRESPSCKKYRHLFSQLPEVTVGDV
KHVTITGRLCPQHGMGKSVFVIEGGDPTNPTTILCSVEELALDYYRRSGFDQGIHGEGST
FSTLCGLLLWDIIFMDGIPDVFRNAYQASPLDLLTDSFFSSREQALEARLQLIHSAPAES
LRAWVTEAWQAQQGRAASLVSWDRFTSLQQAQDLVSCLGGPVLSGVCRRLAADFRHCRGG
LPDLVVWNSQSHHCKLVEVKGPSDRLSCKQMIWLDELQKLGADVEVCHVVAVGAKSKGLG
NT seq 3063 nt   +upstreamnt  +downstreamnt
atgatgtcacaaaagagctcacctgctcaaaaaagaccccgtaaaagcttatctaccggc
aaaactacgaaaagccaatctcattccattacttcgtattttaacagtgtaccacctgct
aaacttgcatgttcaatttgtcataaaatggtgcccaggtatgacttaatccggcacctt
gatgagtcttgtgctaacaatggtgaaatcgttcaaaatgagcctgctcaggctggttta
attaactcaactgtgcctacatcagatttacccagtactcctttagaagatatgacacct
cagaagttatcaccaccaaagagacgtttaatctctgcccagtgtggttcaaaactgggc
gtgcgacagcagaccagtccctactttaaaaaagccttggtgtgcaaaaatcaaaataag
cttccaaatcagagtgtggaaatcaggtctttgggaagtctgtcatcaaaactgtccaga
aggtacgtaaaagctaaaaaatcactctctaagaacgaggggctagccagtcattgccca
ccgacttctccgtccccacctggccccagcctggttgataactgtccagagatggacaac
aaagatgagattttaaacagttcccagaaggaaaacatttactcgtgtgcacctctagag
gaagagaccgcttcagaacagaaggtaaagagcagtaaaaggatgggagatggaagtcag
aaagcttccggtggggagccggccctcacgcctgcatccccagagcaggcccccacatta
ctgtcctcagacttaactcttgtcaataacacggattcctcttcgggagatgctctcgaa
caagaaggtgctggaagggtaggtgtaggggttgatgaacagcttgcggcatgcagccat
gaagaagtacaaatgactgttgatgctgaggtgggaacgctggtgtcagggggggcggaa
tcaaacagtcctgctgacaacgacgacgatgacgcatctacatggagtaacaacccagag
cttagggaagctggcagtgccttaaagagacaaagggcttgcagtcctctggagcagggc
gccagttgtgttcccagtgtgacagctcaaccccaaccgagtcacccgtactacctgagg
agcttcctggtggttctgcaggccatccttgagaacgaagaggacatgaagctcttcgat
gaccaggagaagggcgttatagctaagttttaccagctgtcagccagtggtcagaagttg
tatgtgaggctcttccaacgtaaattaacctggattaaagtgagtaaactggagtatgaa
gagattgcctcggacttaacccctgtggttgaagaattgaagaacttaggctttctacag
acagaatctgagttgcaagaactctctgatgtacttgaactcctttctgctcctgagctg
aaagccctggccaaaaccttccacttggtgagtcccggtgggcagaagcagcagctggta
gacgccttcctcaaactggccagacagcgctcagtctacacttggggcaagactcagcct
ggaatcagagcggtgattttaaagagagctaaagacttggctggcccgtcccttcgagtc
tgtaaaggccctagggctgtgttttgccgcctcctgcttctgttctcgttgactgatacc
atggaagacgaagaagctgcgtgtgggggtcaaggtcagctgtctactgtgctattggtc
aatctgggccgaatggagtttcctcagtacagcatcagccggaagacccagatcttcagg
gacagagaggatcttatcagatacgcagccgccgcgcacatgctgagtgacatctcagct
gccatggccagtgggaactgggaagaagctaaggagctttctcagattgcaaagagagac
tgggaccaactgaaaagccacccttccctgagataccacgaggccttgccactctttctg
cgctgttttactgttgggtggatctacacaaggatttcctctcgggctgttgaagtacta
gagagacttcacatgtacgaggaagctgtcaaggaacttgaaaacctcctcgctcagaaa
gtctattgtcctgacagcagaggccgctggtgggaccgcctggctcttaacctgcaccag
cacctgaagcgtctggaagaggcaatttggtgcatcaaggaaggcctggcagatccacaa
gtgaggacaggacaccgactttctctttatcagcgagctgtgcgccttcgagagtctccg
agctgtaaaaagtacaggcacctattcagccagctgccagaagtcactgtgggagacgtt
aagcatgtgaccatcacaggcaggctgtgcccacagcatgggatgggcaagtctgtgttt
gtcattgagggtggagaccccaccaaccccaccacaatcctgtgttctgtggaggaactg
gcactggactattacaggcggagtggctttgaccaagggattcacggagaagggtccacc
ttcagcaccctgtgtggcctcctgctgtgggatatcatcttcatggatggaataccagat
gtcttcagaaatgcctaccaggcctcccccctggatttgctcacagacagcttcttctca
agcagggagcaggccctggaagccaggctgcagctgatccacagcgcccctgctgagagc
ctgcgggcctgggtgactgaagcatggcaggcccagcaaggcagggcggcttctctggtc
agctgggatcgcttcacttcccttcagcaagctcaggaccttgtctcctgcctcgggggt
cctgtcctcagcggtgtgtgcaggcgcctggctgctgactttcggcactgccgaggaggc
ctccctgatttggtggtgtggaattctcagagccaccattgcaagctggtggaagttaaa
ggccccagtgatcgcctgtcatgtaagcagatgatctggctggatgaactacaaaagctg
ggggcagacgtagaagtatgccatgtggttgcagttggtgctaagagcaaaggtcttggc
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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