KEGG   Rattus norvegicus (rat): 309306
Entry
309306            CDS       T01003                                 
Symbol
Ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1 isoform X1
  KO
K20476  RAB6A-GEF complex partner protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    309306 (Ric1)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Rab associated proteins
    309306 (Ric1)
SSDB
Motif
Pfam: RIC1
Other DBs
NCBI-GeneID: 309306
NCBI-ProteinID: XP_006231317
RGD: 1310016
Ensembl: ENSRNOG00000016172
Position
1:236698901..236798099
AA seq 1427 aa
MYFLSGWPKRLLCAPRSPAEAPLHVQSDPRRAFFAVLAPARLSIWYSRPSVLIVTYKEPA
KSSAQFGSYTQAEWRPNSTMIAVSTANGYILFFHITSSRGDKYLYEPVYPKGSPQMKGIP
HFKEEHCAPALNLEMKKILDLQAPIMSLQSVLEDLLVATSDGLLHLIHWEGMTNGRKAIN
LSTVPFSVDLQSSRVGSFLGFADVHIKDMEYCATLDGFAVVFNDGKVGFITPVSSRFTAE
QLHGVWPQDVVDGTCVAVNNKYRLMAFGCASGSVQVYTIDNTTGAMLLSHKLELTAKQYP
DIWNKTGAVKLIRWSPDNSAVIVTWEYGGLSLWSVFGAQLICTLGGDFAYRSDGTKKDPL
KINSMSWGAEGYHLWVISEFGSQHTQTDTDLGSAVKEPSILLFQFIKSVLTVNPCMSNQE
QVLLQGEDRLYLNCGEASQTQNLKYSSARAEHMPRHEKSPFADGGLESPGLSTLLGHRHW
HVVQISSTYLESNWPIRFSAIDKLGQNIAVAGKFGFAHYSLLTKKWKLFGNITQEQNMIV
TGGLAWWNDFMVLACYNLSDRQEELRIYLRTSNLDNAFAHVTKAPIETLLLSVFRDMVVV
FRADCSICLYSIERKSDGSSTTASVQVLQEVSMSRYIPHPFLVVSVTLTSVSTENGITLK
MPQQARDAESIMLNLAGQLIMMQRDRSGPQIREKDSNPSQRKLVSNALPFCPPVVLAQSV
ENVWTTCRANKQKRHLLEALWLSCGGAGMKVWLPLFPRDHRKPHSFLSQRIMLPFHINIY
PLAVLFEDALVLGAVNDTLLYDSLYTRNSAREQLEVLFPFCVVERTSQIYLHHILRQLLV
RNLGEQALLLAQSCAALAYFPHVLELMLHEVLEEEASSREPIPDPLLPTVAKFISEFPLF
LQTVVHCARKTEYALWNYLFAAVGNPKDLFEECLMAQDLDTAASYLIILQNMEVPAVSRQ
HATLLFNTALEQGKWDLCRHMIRFLKAIGSGESETPPSTPTSQEPSSSGGFEFFRNRSIS
LSQSAENVPPGKFGLQKTLSMPTGPSGKRWSKDSDCAENMYIDMMLWRHARRLLEDVRLK
DLGCFAAQLGFELISWLCKERTRAARVDNFVVALKRLHKDFLWPLPIIPASSISSPFKNG
KCRAVGEQLLKSQSADPFLTPEMDAGISTIQRSQSWLSSIGPTHRDADIASSPGPQMQDA
FLSPLSNRGDECSIGSATDLTESSSMVDGDWTMVDENFSTLSLTQSELEHISMELASKGP
HKSQVQLRYLLHIFMEAGCLDWCVVIGLILKESSVVSQILGIAQSSEIDGEMLQNIKAGL
HAVDRWASTDCPGYKPFLNIIKPQLQKLSEITEELVQPDTFQPITVGKSPEQTSPRAEES
RGSSSHGSITQSETGSNNSMVSRKEEDTTQADEEEPFQDGAYDCSVS
NT seq 4284 nt   +upstreamnt  +downstreamnt
atgtatttcctgagcggctggcccaagaggctgctctgcgcgccgcggagcccggccgag
gcgccgctccacgtccagtctgaccctcggagagcgttcttcgccgtgctggccccggcc
cgcctcagcatctggtacagccgacccagtgtgttaattgtaacatacaaggaaccagct
aaatcgtctgctcagtttggatcttacacacaagctgaatggaggccgaacagtaccatg
atagcagtgtcaacagcaaatggctacatcttgttttttcatattacatcttcaagaggg
gataaatacctttatgaaccagtgtatcccaaaggaagtccacaaatgaaggggatacct
cattttaaggaagaacattgcgccccagcattgaatttagaaatgaagaaaatactggat
ttgcaagcacccatcatgagtttgcagtctgtgctggaagatctccttgttgcaacttct
gatggacttcttcatcttattcattgggaaggaatgacaaatggaagaaaagccatcaat
ctctctacagtacccttttcagtagaccttcagtcatctagagtaggttcattcctcggc
tttgcagatgtgcacattaaagatatggaatattgtgccacacttgatggatttgctgtt
gtgtttaatgatggtaaagttggatttattacaccagtatcgagtagatttactgcagag
cagcttcatggagtttggccacaagatgttgttgatgggacttgtgttgcagtaaataac
aaataccgactgatggcctttggttgtgcaagtggttctgtgcaagtctatacgatagac
aacactactggagccatgctgctgtctcataaactagagcttacagcaaagcagtatcct
gacatctggaacaaaacaggagctgttaaattgattagatggtctcctgacaacagtgct
gtaatagtaacctgggaatatggaggtctttctctgtggagtgtgtttggagcccagctg
atttgtacacttggaggagactttgcttacaggtcagatggtaccaaaaaagatcccctt
aagatcaactccatgagctggggtgcagaaggctatcacctatgggtaatcagtgaattt
ggttctcagcacactcaaactgacactgacctcgggagtgcagttaaagagcccagcatt
ttgttatttcagtttatcaagagtgtactcactgtaaacccttgtatgagtaaccaagaa
caggtgttacttcagggagaagatcgcttatacttgaactgtggagaagcctcacagacc
caaaatctgaagtactcttcagcacgtgctgagcatatgcccagacacgagaagagccca
tttgcagatggaggtctagagtctccaggattaagcactttacttggacatcgacattgg
catgttgtacagatttccagcacctatctagaaagcaattggcctatacggttttcagct
attgataaacttggacaaaatatcgctgtggctggcaagtttgggtttgcgcattattct
ttacttaccaagaaatggaaactttttggaaacattactcaggagcaaaatatgattgtg
actggtggcttagcctggtggaatgactttatggtccttgcctgttacaacttaagtgac
cgccaagaagagctcagaatctacctacgaacatcaaacctggacaatgcctttgctcat
gtcaccaaagcaccaatagaaacattactgcttagtgtcttccgggacatggtggtagtg
tttagagcagactgttcaatatgcctctacagtattgaaagaaaatccgatggttcgagt
acgacagcgagtgttcaggttcttcaggaggtctccatgtcgaggtacattcctcatccc
ttcctggtggtgtctgtcacactgacgtcagtgagtacagagaatggcatcaccttgaaa
atgccacaacaggctcgggatgcagagagcataatgctgaaccttgcaggacagctcatc
atgatgcagagggaccggtcaggccctcagatccgggagaaggacagtaaccctagccaa
aggaaactcgtgagtaacgctctgccgttctgccctcccgttgtactagctcagtcagtg
gaaaatgtctggactacctgtcgagcaaacaaacaaaagcgtcaccttctggaggccctc
tggctgagctgtggtggtgcggggatgaaggtttggctccctctcttccccagggatcac
cgaaagccccactccttcttgtcccagcggatcatgctgcctttccacatcaacatttac
cccctcgccgttctgtttgaagacgcgttggtccttggtgctgtcaatgacactctgctc
tatgattctctgtacacacggaacagtgctagggagcagctggaggtgctctttcccttc
tgcgttgtggagagaacctctcagatctacctccaccatatcctccgccagctcctggtc
aggaaccttggcgagcaagccctccttctggctcagtcgtgcgctgcgttagcttacttc
cctcatgtgttggagctcatgctccatgaagtgctggaagaggaagctagctcacgggag
cccattcccgacccgctgcttcctaccgtggcgaagtttatctccgagttccccctcttc
cttcagacagtcgtgcactgcgcccggaagactgagtatgcgctgtggaattaccttttt
gcagctgttgggaaccccaaggacttattcgaggaatgtttgatggctcaggacttggac
acagctgcctcttaccttattatcctacagaatatggaagtccccgcagtaagtaggcag
catgccacccttctgttcaacacagcactggaacagggcaaatgggacctgtgtcgacac
atgattagatttcttaaagccattggttctggagaatctgagacccctccatccacaccg
acatctcaggagcccagttcaagtggtggctttgagttcttcaggaatcgcagcatcagt
ttatcccagtcagctgaaaatgttcctcctggtaaattcggcttacagaaaactctaagt
atgccaactggtccttctgggaaaaggtggagcaaagacagtgactgtgcagagaacatg
tacatcgacatgatgctgtggcgacacgctcggcgtctcctagaagacgtgcgcctgaag
gacctgggctgctttgcagcccagctaggctttgaactcatcagttggctttgcaaagaa
cgcactcgagccgcccgtgtggacaactttgtagtagccctgaagagactgcacaaggat
ttcctgtggcctcttcccattatcccagcctcttccattagttcccctttcaaaaatggg
aaatgtcgagcagtgggagagcagctgttgaagtctcagtcagctgacccttttcttacc
cctgagatggatgccggcatctctaccatccaacgcagtcagagctggctcagcagcatt
ggtcccacccatcgtgacgcagacatagcctcatctcctggaccacaaatgcaagatgct
ttcctctcaccattatctaatagaggggatgaatgcagcattggctcagctacagacttg
actgaaagcagctccatggtggatggagactggacaatggtggacgaaaacttctccaca
ctcagcttgactcagtctgagctggagcacatctccatggagttggcaagcaaagggccc
cacaaatctcaagttcagctgcgttatctgctgcacattttcatggaggcaggatgtctg
gactggtgtgttgtcatcggcctgattctcaaagaatcctccgtggtcagtcagattctt
gggattgctcagtcttcagagatagatggagagatgttacagaacataaaagcagggctg
cacgccgtagaccgatgggcctctacagactgccctggatataagccatttttaaacatc
attaagccacaactacagaagctcagtgagataacggaagagttggtccagcctgacacc
ttccagccaataacagtgggtaagagtcctgaacagaccagcccccgggcagaggagagc
aggggctcttctagccatgggagcatcactcagagtgagaccgggagtaacaacagcatg
gtcagccggaaagaagaggacacaacacaagcagatgaagaggagccatttcaggatggg
gcttatgactgttctgtgtcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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