KEGG   Rattus norvegicus (rat): 309446
Entry
309446            CDS       T01003                                 
Symbol
Hps6
Name
(RefSeq) BLOC-2 complex member HPS6
  KO
K20192  Hermansky-Pudlak syndrome 6 protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    309446 (Hps6)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    309446 (Hps6)
SSDB
Motif
Pfam: HPS6_C HPS6 PHTB1_C
Other DBs
NCBI-GeneID: 309446
NCBI-ProteinID: NP_852097
RGD: 631341
Ensembl: ENSRNOG00000018433
UniProt: Q7M733 A6JHK5
Position
1:254802250..254804859
AA seq 809 aa
MKRAGTLRLLSDLSNFTGAARLRELLAGDPAILVRCSPDGRHLLLLRPPGSPAPQLLVAV
RGPGLPLERAWSEGDPSPLDVFFVPWLARPALILVWESGLTEVWGVGMEPGWKLLQSTEL
CPDGGARVMAVAATRGRLVWCEERQPGVEDQPGQLSMAFNHCVCVKTLDTSGEAGTKLGC
THILLHHCPSFGLIASRKELFLVPTSTTWPGVAHVLLIWSPSKGKVIVAAPSLGLSHSKS
LNPKQGDTWDFRTLLRGLPGFLSPREPLAVHTWAPSSQGLLLLDLKGKVSLVQCHGGTRT
VGLLQEAPVGLQGSAALGTFHGTLACVLGSTLELLDMSSGRLLERKVLSTDRVHLLEPPA
PGVKNEEDLETRGALRLLSALGLFCVCWEAPQGLEVPSDKDLVFEEACGYYQRRSLRGTQ
LTPEELRHNSMFRAPQALASILQGHLPPSALLTTLRAELRDYRSIEQLKAQLVAGDDEET
GWTELAEHEVARLLRTHLTGDQLAQFNTIFQALPTAAWSATLQALQLQPDRSGRLRSQAP
PDVWKKVLRAPTAGKEHPNGILPPFELLCQCLGQLEPQWLPPFVELAQQQGGPGWGAEGP
SLPLYRRALSVLGEEGKRPEALELELLLGSGRPKAVLQAVRQLIKKEQWERALEAGLTLD
SSSPLLRSEIFNLLLAEFAQHRRLDTHLPLLCRLCPPEVAPDELLLLLRTHLPDDAGATP
FPEPGAEPGAEPPLTVGLVRALLEQTGAQGRSSGPVQSTFEDILWDSGTPPPTPPRGPMT
TLQASDHPGQEAWGPSGQGLGAADVGVHS
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgaagcgtgcaggaactctgcgcctgctttcggatctgagcaacttcactggcgcggcc
cggctccgcgagttgttggcaggggacccagctatcctagtccgctgcagccctgatggc
cgtcacctgctactgttaagacctcccggatcgcccgccccccaacttctagtggctgtg
cgtgggccgggcctgcctctggagcgtgcctggtcggagggcgacccctcgccgctggac
gtctttttcgttccatggctggcgcgacccgcgctgatattggtatgggagagtggccta
acagaggtgtggggcgtggggatggagcctggatggaagctacttcagagcactgagttg
tgtccggatggtggagcccgcgtgatggctgtggcagcaacccgaggccgcctagtttgg
tgcgaggagcgtcagcctggcgttgaggaccaaccagggcagctttcaatggccttcaac
cactgtgtgtgcgtcaagaccctggacaccagcggggaggctggcaccaaactaggctgc
acccacatcctgctgcatcactgcccctcttttggactgatagcctcccgcaaggaactc
ttcctggtgcctacttccaccacttggcctggtgtggcccatgttctgctcatctggagc
ccaagcaaggggaaggtaatagttgctgccccatctctcggtctttctcacagtaaaagc
ctgaatcccaaacaaggggatacttgggactttcggaccctgctgcgaggccttcctgga
ttcctgtcccccagggagccgctggctgtacacacttgggccccatcttcccagggcttg
ttgttgcttgacttgaaaggtaaggtgagcctagtgcagtgccatggtggtactcgaact
gtgggactcctgcaggaggcacctgtaggtctacaagggtctgcagccctgggaacattt
catggcaccttagcctgtgtcttgggctccaccttggaactgctggacatgagcagtggg
cggctgttggaaaggaaggtactaagtacagacagagtacacctcctggagcctccagcc
cctggcgtgaagaatgaggaagacctagagacccgaggagctctccgtttgctttcagcc
ttgggtctcttttgtgtgtgttgggaagctccccaaggccttgaggtgccctcggacaag
gatctggtgtttgaggaggcctgtgggtactaccagcgtcggagtcttcgaggcacccag
cttaccccggaagagctgagacacaacagcatgtttcgggcacctcaggccttggcctcc
attctccagggccacctgcccccatctgcactattgaccaccctgagggctgaacttcga
gattatcggagtatagaacagctcaaggcccagctggtggctggggatgatgaagagacg
ggctggacggagttagcagagcacgaggtggcacgcctgctgagaacccacttgacagga
gaccagctggcccaattcaacaccattttccaagcccttcctacagcagcttggagtgcc
accctccaagccctacaactgcagccggataggagtggcaggctgaggtcccaagcgccc
ccggatgtatggaagaaagtcctgagggctccaacggctggaaaggaacatcccaatgga
atcctgcctccctttgaactcctgtgtcagtgcctaggccagctagagcctcagtggctt
cccccgtttgtggaactggcacagcaacagggtggtccaggctggggcgccgaaggtccc
agtctgcccctttatcgccgagccctgtccgtgctgggtgaggaagggaagagacctgag
gctctagaactcgagctgcttctgggcagcgggcgacccaaagccgtgctacaagctgtg
aggcagctaataaagaaagaacagtgggaacgggctctggaggccggcctgaccctggac
tcctccagccccctgcttcgaagcgagatcttcaacctgctgctggcagagtttgcccag
caccgccgccttgatacacacctccctctcctctgtcgcctgtgcccaccagaagtggct
ccagatgagctcctgcttctactgaggacacatctcccagacgatgcgggagccacccct
ttccctgagcctggggctgagcctggggctgagccccctctcacagtgggcttggtcaga
gccctgctagaacagactggggctcagggaaggtcctctggcccagttcaaagcaccttt
gaggacatcctatgggattcaggcactccaccccctaccccacctcgcggacctatgact
actctccaggcatcagaccacccagggcaggaagcctggggaccatctggacaggggctt
ggtgcagctgacgtgggagttcattcgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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