KEGG   Rattus norvegicus (rat): 309452
Entry
309452            CDS       T01003                                 
Symbol
Nfkb2
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit
  KO
K04469  nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04010  MAPK signaling pathway
rno04064  NF-kappa B signaling pathway
rno04380  Osteoclast differentiation
rno04625  C-type lectin receptor signaling pathway
rno05134  Legionellosis
rno05166  Human T-cell leukemia virus 1 infection
rno05169  Epstein-Barr virus infection
rno05200  Pathways in cancer
rno05203  Viral carcinogenesis
rno05224  Breast cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    309452 (Nfkb2)
   04064 NF-kappa B signaling pathway
    309452 (Nfkb2)
 09150 Organismal Systems
  09151 Immune system
   04625 C-type lectin receptor signaling pathway
    309452 (Nfkb2)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    309452 (Nfkb2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    309452 (Nfkb2)
   05203 Viral carcinogenesis
    309452 (Nfkb2)
  09162 Cancer: specific types
   05224 Breast cancer
    309452 (Nfkb2)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    309452 (Nfkb2)
   05169 Epstein-Barr virus infection
    309452 (Nfkb2)
  09171 Infectious disease: bacterial
   05134 Legionellosis
    309452 (Nfkb2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    309452 (Nfkb2)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    309452 (Nfkb2)
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer Ank_2 Ank Ank_3 Ank_5 Ank_4 Death
Other DBs
NCBI-GeneID: 309452
NCBI-ProteinID: NP_001008350
RGD: 1307189
Ensembl: ENSRNOG00000019311
UniProt: A6JHL7 A6JHL8
Position
1:255106010..255114649
AA seq 898 aa
MDRCYDPGLDGIPEYDDFEFSPSIVEPKDPAPETADGPYLVIVEQPKQRGFRFRYGCEGP
SHGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVC
AVSVGPKDMTAQFNNLGVLHVTKKNMMEIMIQKLQRQRLRSKPQGLTEAERRELEQEAKE
LKKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISQPIHDSKSPGASNLKISRMDKTAGSV
RGGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIE
RPVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGS
GGSAGGYGGAGGGGSLGFFSSFAYSPYQSGAAPMGCFPGGGGGAQMAGSGRDAEAGEAEE
QPRAPSEAPQSEQQALDTLQRAREYNARLFGLAQRSARALLDYGVTADARALLAGQRHLL
MAQDENGDTPLHLAIIHGQTGVIEQIAQVIYHAQYLGVINLTNHLHQTPLHLAVITGQTR
VVSFLLQVGADPTLLDRHGDSAVHLALRAGAAAPDLLQAVLHSGAHALPQMLHMPDFEGL
YPVHLAVHARSPECLDLLVDCGAEVEAAERQGGRTPLHLATEMEELGLVTHLVTKLHANV
NARTFAGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPLCPLPSPPTSGSDSDSEGPE
TDTQRNFRGHTPLDLTRSTKVKTLLLNAAQNTTEPPLAPPSPAGPGLSLGDAALQNLEQL
LDGPEAQGSWAELAERLGLRSLVDTYRKTPSPSGSLLRSYKLAGGDLVGLLEALSDMGLH
EGVRLLKAPETRDKLPSTEVKEDSAYGSQSVEQEAEKLCPPPEPPGGLCHGHPQPQVH
NT seq 2697 nt   +upstreamnt  +downstreamnt
atggaccgttgctacgatccaggtttggatggcatccctgaatatgatgattttgaattc
agcccctccattgtggagcccaaggatccagccccagagacagctgatggcccctatctg
gtgattgtggaacagcctaaacagcgaggcttcagatttcgatatggctgtgaaggcccc
tcccatggaggtctgccaggtgcctccagtgagaagggccggaagacctatcctactgtc
aagatctgtaactacgaggggccggccaagattgaggtggacctggtgacacacagtgac
ccaccccgtgcacatgcccacagtctggtgggcaagcagtgctctgagctgggggtgtgt
gccgtgtctgtgggacccaaggacatgactgctcaatttaataatctgggtgtcctgcat
gtaaccaagaagaacatgatggagattatgattcagaaactccagaggcagcggctccgc
tccaagcctcagggccttacagaggccgagcgccgggagctggagcaggaggccaaggag
ctgaagaaagtcatggatttgagcattgtacggctacgcttctcagctttccttcgagct
agtgatggctccttctccctgcccctgaagcctgtgatctcccagcccatccacgacagc
aagtctccaggggcctcaaacctgaagatttcccgaatggacaaaacagcaggttccgtg
cgcggtggagacgaagtttatttgctttgcgataaggtgcagaaagatgacattgaggtt
cgtttctatgaggatgacgagaacggatggcaagcctttggggacttctctcccacagac
gttcataaacagtatgccattgtgttccggacaccgccctatcacaagatgaagattgag
aggcctgtaacggtgttcctgcagctgaaacgcaagcgtgggggcgatgtctccgactcc
aaacagttcacgtattaccctctggtggaagacaaggaggaagtacagaggaagcggaga
aaggccttgcctaccttctcccagcccttcgggggcggatcccacatgggtggaggttct
gggggctccgctgggggttatggaggcgctggaggaggtggcagcctcggctttttctcc
tccttcgcctacagcccctaccaatccggtgcagccccaatgggctgcttcccgggtggg
ggaggtggagcgcagatggccggctctggacgggacgcggaggctggcgaggcagaggag
cagcccagagcaccctccgaggccccccagagcgagcagcaggccctggacacgctgcag
cgagctcgcgagtacaacgcgcgcctgttcggtctggcgcagcgcagcgcccgagcgttg
ctggactacggcgtcaccgcggacgcgcgtgctctgctagcgggacagcgccacctgctg
atggcacaggacgagaacggagacacgccgctgcacctggccattatccatgggcagact
ggtgtcattgagcagatagcccaagtcatttatcatgctcagtaccttggggtcatcaac
ctcaccaatcacctgcaccagacacctctgcacctggcagtaatcactgggcagacacgg
gtggtgagcttcctgctgcaggtgggtgcagaccccacactgctggatcgccatggtgac
tcagctgtccacttggctctccgggcaggtgctgcagccccagacctgctgcaggcagtg
ttgcacagtggagcccacgctctgccccaaatgttacacatgcctgattttgagggacta
tacccagtacacctggcggtccatgcccgaagccctgagtgcctggatctgttagttgac
tgtggagctgaagtggaggcagcagagaggcaaggaggccgaaccccactgcatctagcc
acagagatggaggagctggggttggtcacccatctggtcaccaagctccatgctaatgtg
aatgcccggacctttgctggaaacacacccctccacctggcggctggacttggatcccca
accctcacccgcctccttctaaaggctggtgctgacatccatgcggagaatgaagagcct
ctctgcccactgccctcaccccctacctctgggagcgattcagactctgaggggcctgag
acagatacccaaagaaacttccgaggccatacccctcttgacctcactcgcagtaccaag
gtgaagaccctgctgttgaacgctgctcagaacaccacggagccacccctggccccaccc
agccctgcagggccagggctgtcactgggggatgcagccctgcagaacctggagcaactg
ctagatgggccagaagcccagggcagctgggcagagctggcagagagactggggctgagg
agcctggtggacacatacaggaagaccccctcccccagtggcagtctccttcgtagttac
aagctggctggtggagacttggtgggtctattggaagccttgtccgacatgggtcttcat
gagggagttaggctgctgaaggcgcctgagacccgagacaagctgcccagcacagaggtg
aaagaagacagtgcctacgggagccagtcagtggagcaggaggcagagaagctgtgtcca
ccccctgagcctccaggagggctctgccacgggcacccccagcctcaggtgcactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (10)   
   KEGG PATHWAY (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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