KEGG   Rattus norvegicus (rat): 309457
Entry
309457            CDS       T01003                                 
Symbol
Pcgf6
Name
(RefSeq) polycomb group RING finger protein 6
  KO
K11470  polycomb group RING finger protein 6
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03083  Polycomb repressive complex
rno04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    309457 (Pcgf6)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    309457 (Pcgf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    309457 (Pcgf6)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     309457 (Pcgf6)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 RAWUL zf-RING_2 zf-RING_UBOX zf-RING_5 zf-RING_6 zf-RING_10 PBP1_TM TRAF3_RING zf-C3HC4_4 zf-rbx1
Other DBs
NCBI-GeneID: 309457
NCBI-ProteinID: NP_001013172
RGD: 1306904
Ensembl: ENSRNOG00000020250
UniProt: Q5XI70
Position
1:complement(255866709..255886306)
AA seq 351 aa
MEEAETDATENKRASEAKRASAMLPPPPPPISPPALIPAPAAGEEGPASLAQAGAPGCSR
SRPPELEPERSLGRLRGRFEDYDEELEEDEEMEEEEEEEEEMSHFSLRLESGRADSEDEE
ERLINLVELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQT
QPLYNIRLDRQLQDIVYKLVVNLEEREKKQMHDFYKERGLEVPKPAVPQPVPASKGRTKK
ALESVFRIPPELDVSLLLEFIGANEDTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMGLD
PACQVDIICGDHLLERYQTLREIRRAIGDTAMQDGLLVLHYGLVVSPLKIT
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggaggaggctgagacggacgccacggaaaacaagcgcgcctctgaggccaagcgagcc
tcggccatgctgccaccgcctccgcctcccatctctccgcccgccctcatcccggcgcca
gcggccggtgaggagggcccggcgtccctggcccaggcgggcgcacccggctgttctcgc
tctcggcccccggagttggagcccgagcgcagcctgggccgcttgagaggccgcttcgag
gactacgatgaagagttggaagaggatgaggagatggaggaggaggaagaggaggaggaa
gagatgagccacttctctctgcgtctggagtccggacgggcggactccgaggacgaggaa
gagcgcctgatcaacctggttgagctgaccccctacatcttgtgctccatttgcaaaggt
tacttgatagatgccaccactattacagaatgtctccacaccttctgtaaaagctgcatt
gtgagacatttttactatagcaacagatgccccaaatgcaacatagtcgtccaccagact
cagcctctttataatataaggttggaccggcagttacaagacatagtatacaaattagta
gtcaatctagaggaaagagaaaaaaagcaaatgcatgacttctataaagaaagaggtcta
gaagtccctaagcctgctgttccacagcccgtccctgcaagcaaaggaagaaccaagaaa
gccctagagtcagtgtttcgtattccgcctgaacttgatgtgtctttattacttgagttc
attggtgctaatgaagacacaggacattttaagccattggaaaagaagtttgtgcgtgtt
tcaggagaagcaactattgggcatgtagaaaaatttcttagaagaaaaatgggtcttgat
ccagcttgtcaggtagacatcatctgtggggatcacttactggagcggtaccaaactctg
cgggaaatccgacgtgcaataggtgacacagcaatgcaggatggtctacttgttcttcat
tatggtcttgtggtttctcctttaaaaataacttga

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