KEGG   Rattus norvegicus (rat): 309533
Entry
309533            CDS       T01003                                 
Symbol
Sorcs1
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 precursor
  KO
K27081  VPS10 domain-containing receptor SorCS1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    309533 (Sorcs1)
Membrane trafficking [BR:rno04131]
 Protein recycling
  Others
   Others
    309533 (Sorcs1)
SSDB
Motif
Pfam: Sortilin-Vps10 Sortilin_C PKD PKD_4 BNR_6
Other DBs
NCBI-GeneID: 309533
NCBI-ProteinID: NP_001178492
RGD: 1305910
Ensembl: ENSRNOG00000011313
UniProt: F1LUZ4
Position
1:complement(259022007..259535731)
AA seq 1168 aa
MGKVGAGDGSSAALSALLTGAGLLMLLAPGICSSLSCCPPQHPSSTPRWTLTPRGFSYPG
PLGRAPATPPPLFMRPLFAVAPGDRALFLERAGGSRVSVATASRSGRRRRSGMDPEKTEP
GEGTSRSRRDMLRDGGQQGPGTGARDPDKATRFRMEELRLTSTTFALTGDSAHNQAMVHW
SGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNK
RKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSA
EFGRRWQLIQEAVVPNRFYWSVLGSNKEPDLVHLEARTVDGHSIYLTCRMQNCTEANRNK
PFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNPFAQMKLPKYALPKDMHVISTDE
NQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFL
ANKKIDNQVKTFITYNKGRDWRLLQAPDADLRGDPVHCLLPYCSLHLHLKVSENPYTSGI
IASRDTAPSIIVASGNIGSELSDSDISMFVSSDAGNTWRQIFEEEHSILYLDQGGVLVAM
KHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQL
VKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSERKCMQGTYAGAMESEP
CVCTEADFDCDYGYERHSSGQCLPAFWFNPSSLSKDCSLGQSYLNSTGYRKVVSNNCTDG
VREQYTAKPQKCPGKAPRGLRIVTADGKLTAEQGHNVTLMVQLEEGDVQRTLIQVDFGDG
IAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNSLGSDSAVLYLHVTCPLEHVHLSLPFV
TTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAG
NAILQDTKTIAVYEEFRSLRLAFSPNLDDYNPDIPEWRRDISRVIKKSLVEATGIPSQHI
LVAVLPGLPTAAELFVLPYQDGARENKRSPEDLEQISEVLIHKLNQNLVHFELKPGVQVL
VHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRRVALTSPPSPSTQPGD
SSLRLQRPRQATPPSSPKRGSAGAQFAI
NT seq 3507 nt   +upstreamnt  +downstreamnt
atgggaaaagttggcgccggggacggctcctcggccgcgcttagcgcgctcctaacggga
gccgggcttctgatgctcttagcccctggcatctgcagcagcctttcttgctgccctccg
caacaccctagctcgaccccacgctggacccttaccccaagaggcttttcttaccccgga
ccgctgggtcgggctcctgccacgcccccgcccctcttcatgagacccctgttcgcagtg
gcccccggggaccgggcgctgtttctggagcgagctgggggcagcagggtgtcagtggcg
accgcttcacgctctggccgtaggagacggagtggaatggatcctgagaagactgaaccc
ggagagggtacgagtcggagccgccgggacatgctaagggatggagggcagcaggggcct
gggactggcgcgcgggacccggacaaagccactcgcttccggatggaggagctgagattg
accagcaccacatttgcgctgactggagactcggcacacaaccaagctatggtccactgg
tctggccacaacagcagcgtgattctcattttgacaaagctctatgactataacctggga
agcatcactgagagctcgctttggaggtcaaccgattatgggacaacctacgagaagctg
aatgataaagtggggttgaagaccattttgagctatctctatgtgtgcccaaccaacaag
cgtaagattatgctactcacggacccggagattgagagcagtttgttgatcagctcagat
gaaggggcaacctatcaaaagtaccggctcaacttttacatccagagtttgcttttccat
ccgaagcaagaagactggatcctggcctacagtcaagaccaaaagttatacagctctgct
gagtttggcagaagatggcagcttatccaggaagcagtggtacccaataggttttactgg
tctgtgctggggtcgaacaaagaaccagaccttgtgcatctcgaggccaggaccgtagat
ggtcactccatatacttaacttgtcggatgcaaaactgcactgaagccaacagaaataaa
cctttcccaggatacattgacccggattctttgattgttcaggatgattatgtgtttgtt
cagctcacatcaggaggaagaccacattactatgtgtcctaccgaagaaacccatttgca
caaatgaaacttccgaaatatgctttgcccaaggatatgcatgtcatcagtacggatgag
aatcaggtgtttgcagcagttcaagaatggaaccagaatgacacctacaacctgtacatc
tcagacacacgcggggtctacttcacgctggccttggagaacgtgcagagcagcagaggc
cctgaaggcaatgtcatgattgacctttatgaggtagcagggataaagggaatgttcttg
gctaacaagaagattgacaaccaagtgaagactttcatcacttacaacaaaggcagagac
tggcgtttgctgcaggctccagatgcagatctaaggggggaccctgtgcactgtttgctg
ccctactgttcactacaccttcatctcaaagtttctgagaatccctacacatctgggatc
attgccagcagagacacagccccaagtattatagttgcatcaggtaacataggctctgag
ttgtcagacagcgacatcagcatgtttgtatcatcagatgcagggaacacttggaggcag
atttttgaagaagagcacagcattttgtaccttgatcaagggggagtcctggttgctatg
aaacacacatctctcccaattcggcacctgtggttgagttttgatgaagggaggtcttgg
agcaaatacagttttacatccattccactttttgtggatggagtcctgggggagcctgga
gaagagacactaatcatgacagtgtttggacacttcagtcatcgttctgagtggcagctg
gtcaaagtggattacaagtccatttttgacagacgctgtgctgaagaagactacagaccc
tggcagttacatagccagggggaagcatgcatcatgggagccaagaggatctataagaag
cgaaaatctgagcgcaagtgtatgcaagggacgtatgcaggagcgatggagtctgagcct
tgtgtgtgtacagaggcggactttgactgtgactatggctacgagagacatagtagtgga
caatgcctaccagcattttggttcaacccgtcctcactgtcaaaagactgcagcttggga
cagagttacctcaacagcactgggtacaggaaggtggtctccaataactgcacggacgga
gtgagggaacagtacaccgccaaaccacagaagtgtccagggaaggcccctcgtgggcta
cggattgtcactgcagatgggaaactgacagcagaacaggggcacaatgtcactctcatg
gtgcagttggaagagggggatgtacagcggacactcatccaagtggactttggagatggc
attgcggtgtcttatgtcaacctcagctcgatggaagacggaatcaagcatgtatatcag
aatgtgggcattttccgagtgaccgtgcaggtggacaacagtctggggtctgacagcgcc
gtcctgtacttacatgtaacttgtcccctggaacatgtgcacctgtcccttccttttgtc
acaacaaagaacaaagaggtcaacgcaactgccgtgctgtggcccagccaagtgggcact
ctcacttacgtgtggtggtatgggaacaacacagagcccctgatcaccttggagggcagc
atatcattcaagtttacttctgaaggaatgaacactatcacggtacaggtctcagctggg
aatgccatactgcaagacactaagaccattgcggtatacgaggaattccgctctcttcgc
ttggctttttctccaaacttggatgactacaaccctgacatcccggagtggaggagggac
atcagccgagtaatcaaaaagtctctggtggaagccacagggattcccagccagcatatc
ctggtggcagtgttacctggcttacccactgctgctgagctctttgttttgccctatcaa
gatggagctagagaaaacaaaaggtccccagaggacctggagcagatatctgaagttcta
atccacaaactcaaccaaaacttggtgcactttgagctgaagcctggggtccaagttctt
gtccacgcagctcacctaacagcagcccccctggtggacctcactcctacccacagcgga
tctgccatgctgatgttgctctcagtggtgtttgtggggttggccgtgttcgtcatctac
aagtttaaaaggagagtagctttaacctcccctccctccccttctactcaacctggggac
tcatctctccgattgcaaagaccaagacaagccacaccaccttcatcgccaaagcgggga
tctgctggggcacaatttgcaatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (13)   
   UniProt (1)   
   RefSeq(pep) (12)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (5)   
   Pfam (5)   
All databases (39)   

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