KEGG   Rattus norvegicus (rat): 309544
Entry
309544            CDS       T01003                                 
Symbol
Rbm20
Name
(RefSeq) RNA-binding protein 20
  KO
K24052  RNA-binding protein 20
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    309544 (Rbm20)
Spliceosome [BR:rno03041]
 Complex A
  Other components
   Complex A specific factors
    309544 (Rbm20)
SSDB
Motif
Pfam: zf-C2H2_jaz zf-met RRM_5 FANCF
Other DBs
NCBI-GeneID: 309544
NCBI-ProteinID: NP_001101081
RGD: 1307427
Ensembl: ENSRNOG00000014705
UniProt: E9PT37
Position
1:262671311..262912551
AA seq 1207 aa
MVLAAAMSQDADPSGPEQPDRDACIVPGVQGPPAPQGQQGMQPLPPPLPPPPQPQSSLPQ
IIQNAAKLLDKNPFSVSSQNPLLTSPASVQLAQIQAQLTLHRLKMAQTAVTNNTAAATVL
NQVLSKVAMSQPLFNQLRHPSVLGTTHGPTGVSQHAATVPSAHFPSTAIAFSPPSQAGGP
GPSVSLPSQPPNAMVVHTFSGVVPQTPAQPAVILSIGKAGPTPATTGFYDYGKANPGQAY
GSETEGQPGFLPASASAAASGGVTYEGHYSHTGQDGQATFSKDFYGPSAQGSHAAGGFPA
DQAGSMKGDVGGLLQGTNSQWERPSGFSGQNKADITAGPGLWAPPASQPYELYDPEEPTS
DRAPPAFGSRLNNSKQGFNCSCRRTKEGQAMLSVRPLQGHQLNDFRGLAPLHLPHICSIC
DKKVFDLKDWELHVKGKLHAQKCLLFSESAGLRSICATGEGTLSASANSTAVYNPTGNED
YTSTLGTSYAAIPTRAFAQSNPMFPSASSGTNFAQRKGAGRVVHICNLPEGSCTENDVIN
LGLPFGKVTNYILMKSTNQAFLEMAYTEAAQAMVQYYQEKPALINGEKLLIRMSTRYKEL
QLKKPGKNVAAIIQDIHSQRERCMLREADRYGPERPRSRSPMSRSLSPRSHSPPGPSRAD
WGNGRDSYAWRDEDRETVPRRENGEDKRDRLDVWAHDRKHYPRQLDKAELDERLEGGRGY
REKYLKSGSPGPLHSASGYKGREDGYHRKETKAKLDKHPKQQQQDVPGRSRRKEEARLRE
PRHPHPEDSGKEEDLEPKVTRAPEGTKSKQSEKSKTKRADRDQEGADDKKEGRGAENEAG
TEEQEGMEESPASVGTQQEGTESSDPENTRTKKGQDCDSGSEPEGDNWYPTNMEELVTVD
EVGEEDFIMEPDIPELEEIVPIDQKDKILPEICPCVTATLGLDLAKDFTKQGETLGNGDA
ELSPKLPGQVPSTSTSCPNDTDMEMAGLNLDAERKPAESETGLSPEVSNCYEKEARGAEG
SDVRLAPAAQRMSSPQPADERARQSSPFLDDCKARGSPEDGPHEVSPLEEKASPTTESDL
QSQACQENSRYTETRSLNSRSPEFTEAELKEPLSLPSWEPEVFSELSIPLGVEFVVPRTG
FYCKLCGLFYTSEEAAKVSHCRSTVHYRNLQKYLSQLAEEGLKETEGVDSPSPERSGIGP
HLERKKL
NT seq 3624 nt   +upstreamnt  +downstreamnt
atggtgctggctgcagccatgagccaagacgcggatcccagcggtccggagcaacccgac
agagatgcctgcattgtgcctggtgttcaagggccccctgcgccccaaggccagcaaggg
atgcagcccctgccgccaccgctaccgccaccgcctcagcctcaatccagcctgccccag
atcatccaaaatgctgccaagctcctggacaagaaccctttctccgtcagtagccagaac
cctctgctcacttcgccagccagcgtccagctggcccagatacaggcccagctcaccctc
catcggctgaagatggcacagaccgcagtcaccaacaacactgcagccgccactgtcctc
aaccaagtcctctccaaagtggccatgtcccagcctctcttcaaccagcttcgccatccg
tctgtgcttggcaccacacatggccctactggggtctcccagcatgctgccaccgttccc
agtgctcactttccctcaactgcaatcgccttttcgcccccaagccaggcaggaggcccg
gggccttctgtgagcctccccagccagccccccaatgctatggtagtgcataccttcagt
ggggtggtgcctcagacccctgcccagccagcagtcatcctaagcattgggaaggcgggg
ccgacacctgctactacagggttctatgactatggcaaagccaaccctggccaggcctat
ggttctgaaacggagggccagccgggcttcttgccagcctcggcgtcagccgcagcatca
ggcggtgtgacctatgaaggacactatagccacacagggcaggatggccaagccaccttt
tctaaagacttctatggacccagtgcccaagggtcacatgcagcaggtgggttcccagct
gatcaggctgggagcatgaaaggagacgtcggtgggttgttgcaaggtaccaacagccag
tgggagaggccctctgggttctctggccagaacaaggccgatattacagccgggcccggt
ttgtgggctccacctgccagtcagccttatgaactatatgatcctgaggagcctacctca
gacagggcccctcctgcctttggatctcgacttaacaacagcaagcagggattcaactgc
tcctgccggcggacaaaggaggggcaggccatgctgtccgtgaggcccctgcagggtcat
caactgaatgacttccgaggcttggctccactccaccttccacatatctgcagcatctgt
gacaagaaggtgtttgacctgaaggactgggagctacatgtgaaggggaagttgcatgcc
cagaaatgcctgctcttctcagaaagtgctggcctccggagtatatgtgctacaggagaa
gggacgctgtctgcctctgcaaacagcacagctgtttataaccccactggaaatgaggat
tatacctcaactcttggaacatcatatgcagccattccaacaagggcctttgctcaatca
aaccccatgtttccttcggcttcctctgggacaaattttgcacagaggaaaggtgctgga
cgagttgtgcacatctgcaatctcccagagggcagctgcacggagaatgacgtcatcaac
ctggggctgccctttggcaaggtcactaattacatccttatgaagtcaactaatcaggct
ttcttggagatggcttacacagaagctgctcaagctatggtccagtactaccaagaaaag
cccgcgcttatcaatggcgagaagttactcattcggatgtccacgagatacaaggaattg
cagctgaagaaacctgggaaaaatgtggctgctatcatccaggacatccactcccaaagg
gagaggtgcatgctccgggaagctgacagatatggtccagagcgaccacgttctcgaagt
ccaatgagccgatcgctctccccgagatcccacagtcctcctggcccctctcgggctgat
tggggcaatggccgtgactcctacgcatggagggacgaggatcgggagacggtgcccagg
agggagaacggggaagacaagagggacaggttggatgtttgggcacatgaccggaaacac
tatcccaggcagctggacaaagccgagttggatgagcgactcgaaggagggaggggctac
cgggaaaagtacttgaagtcagggtcccccggcccactccattctgcgtctggctacaaa
ggccgggaagatggctaccatcgaaaagagactaaagctaagttggacaaacacccaaag
cagcagcagcaggatgtgccaggaagatccaggaggaaagaagaggcgcgactacgggag
cccagacaccctcacccagaggactctggcaaggaagaggatctggagcccaaggtcact
cgggcccccgagggtaccaagtccaagcaaagtgagaaaagtaaaaccaagagagccgac
agagaccaagaaggagctgatgacaaaaaagaaggccgaggggcagagaatgaggctggg
actgaggaacaggaaggcatggaagagagccccgcatcggtgggcacacagcaggaaggg
acggagtcctccgatccagaaaacacaaggacaaagaagggacaagactgtgacagtgga
agtgagcctgagggggacaactggtaccccaccaacatggaggagctggtcacagtggac
gaagtaggggaggaagacttcatcatggagccagacataccggagctggaagaaattgta
cccatcgaccagaaagacaaaatcctccccgaaatatgtccctgtgtaacagccacctta
ggtttggacttggccaaagacttcaccaagcagggagagaccctagggaacggagacgca
gaactcagcccgaagctgcccggacaagtgccgtctacttccacaagctgtcccaatgac
acggacatggagatggctggcctaaatctggatgctgagcggaagccagctgaaagcgag
acaggcctctcaccggaggtctcaaattgctacgagaaggaggcgagaggagcggagggc
tcagatgtgcgtctggcccctgcagcccagcgaatgtcctcccctcagccagcagatgag
agggcccggcagtccagcccttttctcgatgactgcaaggccagggggtccccagaagat
gggcctcatgaagtcagccccctggaagaaaaagccagccccactactgaaagcgacctc
caaagccaggcttgccaagaaaactccaggtacacggagacgagatctctgaactcgaga
tcaccagaattcaccgaagcggagctgaaagagcccctttctttgccttcctgggaacca
gaggtgttcagtgaacttagcattcctctaggagtggagttcgtggttcccaggactggc
ttttactgcaagctgtgtggcctgttctacacaagcgaggaggcggccaaagtgagccac
tgccgcagcactgtacactacaggaacttacagaagtacctgtcccagctggcagaggag
ggactgaaggagacagagggggtagacagcccaagccccgagcgcagcgggattggtcca
cacttggaaaggaagaagctatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (32)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (9)   
DNA sequence (11)   
   RefSeq(nuc) (9)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (61)   

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