KEGG   Rattus norvegicus (rat): 309548
Entry
309548            CDS       T01003                                 
Symbol
Shoc2
Name
(RefSeq) leucine-rich repeat protein SHOC-2
  KO
K19613  leucine-rich repeat protein SHOC2
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04014  Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04014 Ras signaling pathway
    309548 (Shoc2)
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_9 LRR_5
Other DBs
NCBI-GeneID: 309548
NCBI-ProteinID: NP_001013173
RGD: 1308146
Ensembl: ENSRNOG00000015339
UniProt: Q6AYI5 A6JHX2
Position
1:262964345..263052898
AA seq 582 aa
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKESSAA
QPGVAFSVDNTIKRPNPALGTRKKSSNAEVTKELNKCREENSMRLDLSKRSIHILPPSVK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq 1749 nt   +upstreamnt  +downstreamnt
atgagtagtagtttaggaaaagaaaaagactcgaaagagaaagatcccaaagtaccatct
gccaaggaaagagaaaaggaggcaaaagcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaagaaggagtccagtgctgcc
caacctggtgtggctttttcagtcgacaataccatcaaacggcctaatccagcacttggg
actagaaagaaatccagcaatgccgaggtaactaaggagcttaacaaatgccgggaggag
aactcaatgcgcttggacttatccaagcggtctatacatatactgccgccgtcagtcaaa
gagttgacacaactcacggaactttatttatacagtaacaaattgcagtccctcccagca
gaggtgggctgtctagtcaatcttatgacgctggctctcagtgagaattcactcaccagt
ttgcctgactctctcgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaatcccttcggtggtgtacaggctagactccctgactactctctaccttcgc
tttaaccgcataaccgctgtggagaaggacgtcagaaacctgccgaggctcagcacgctt
agcatccgagagaacaaaatcaagcagctccctgccgagatcggtgaactgtgtaacctc
attaccctggatgtagctcacaatcaacttgaacaccttccgaaggagattgggaactgc
acccagataaccaacctggacctgcagcacaatgagctgctagacctcccagacacaata
ggaaacctgtccagtttaaatcgccttggcctgaggtacaatagattgtcagcaataccc
agatcattagcaaaatgcagcgcacttgaggagctaaatctagagaacaataacatttct
actctgccagagagtcttttatccagtcttgtaaaattgaatagcttgaccttagctaga
aattgcttccagttgtacccagtgggaggcccatctcagttttccaccatttattccctc
aacatggaacacaatcgaatcaacaaaatcccatttggaattttttccagagctaaagtg
ctgagtaagctgaatatgaaggacaatcagttaacatcacttcctttggattttggaact
tggaccagtatggtagaattgaatttagcgaccaatcagctcacaaagatcccggaggac
gtgtctggtcttgtttctcttgaggttctaatattatcgaacaatcttctaaagaagctt
ccccatggtcttggaaaccttagaaagttacgagaattagacctggaggagaacaagctg
gagtccttgcccaatgagattgcttatcttaaggatttacagaaattagtcttgacaaac
aaccagttgaccactctccccagaggcatcggtcaccttaccaacctcacacaccttggt
ctcggagagaaccttctcactcaccttcctgaggaaattggtacactggaaaacctagag
gagctgtacttgaatgacaaccccaaccttcacagcctccccttcgagcttgccctctgc
agcaagctgtcaatcatgagtattgagaactgtccactcagtcacctcccacctcaaatt
gttgctggagggccttcattcattattcagttcttaaagatgcagggtccgtatcgtgcc
atggtctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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