KEGG   Rattus norvegicus (rat): 309584
Entry
309584            CDS       T01003                                 
Symbol
RT1-M4
Name
(RefSeq) RT1 class Ib, locus M4 precursor
  KO
K06751  MHC class I antigen
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04144  Endocytosis
rno04145  Phagosome
rno04218  Cellular senescence
rno04514  Cell adhesion molecules
rno04612  Antigen processing and presentation
rno04940  Type I diabetes mellitus
rno05163  Human cytomegalovirus infection
rno05165  Human papillomavirus infection
rno05166  Human T-cell leukemia virus 1 infection
rno05167  Kaposi sarcoma-associated herpesvirus infection
rno05168  Herpes simplex virus 1 infection
rno05169  Epstein-Barr virus infection
rno05170  Human immunodeficiency virus 1 infection
rno05203  Viral carcinogenesis
rno05320  Autoimmune thyroid disease
rno05330  Allograft rejection
rno05332  Graft-versus-host disease
rno05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    309584 (RT1-M4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    309584 (RT1-M4)
   04145 Phagosome
    309584 (RT1-M4)
  09143 Cell growth and death
   04218 Cellular senescence
    309584 (RT1-M4)
 09150 Organismal Systems
  09151 Immune system
   04650 Natural killer cell mediated cytotoxicity
    309584 (RT1-M4)
   04612 Antigen processing and presentation
    309584 (RT1-M4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    309584 (RT1-M4)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    309584 (RT1-M4)
   05170 Human immunodeficiency virus 1 infection
    309584 (RT1-M4)
   05168 Herpes simplex virus 1 infection
    309584 (RT1-M4)
   05163 Human cytomegalovirus infection
    309584 (RT1-M4)
   05167 Kaposi sarcoma-associated herpesvirus infection
    309584 (RT1-M4)
   05169 Epstein-Barr virus infection
    309584 (RT1-M4)
   05165 Human papillomavirus infection
    309584 (RT1-M4)
  09163 Immune disease
   05320 Autoimmune thyroid disease
    309584 (RT1-M4)
   05330 Allograft rejection
    309584 (RT1-M4)
   05332 Graft-versus-host disease
    309584 (RT1-M4)
  09166 Cardiovascular disease
   05416 Viral myocarditis
    309584 (RT1-M4)
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    309584 (RT1-M4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rno04147]
    309584 (RT1-M4)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
    309584 (RT1-M4)
Exosome [BR:rno04147]
 Exosomal proteins
  Proteins found in most exosomes
   309584 (RT1-M4)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:rno00537]
 Antigens
  309584 (RT1-M4)
SSDB
Motif
Pfam: MHC_I C1-set ig
Other DBs
NCBI-GeneID: 309584
NCBI-ProteinID: NP_001161815
RGD: 1562593
Position
20:1557312..1561063
AA seq 341 aa
MGSVVPRIFFLLLVTSLAPTQAGAGSHSLRYFTTTLYDPGYRKPRFTVVGYVDNTQIVNF
DSHLASQRVEPRVPFIAQDPEHLEELTRLGRGILILGRIELWTLFGYHSQRENESHTVQW
LFGCDIGPDRRLLRGYKHVAYEGQDYISLTEDLRSWVAVDTEEAQITRRKWEASGIATSW
RSFLEGRCVKWLLKYLDKGKEMLQRADPPKTNVAHHPRPEGDVTLRCWALDFYPADIILT
WQRDEEDLTQDMDLVETRPTGNGTFQKWASVVVPSGEEHRYTCHVLHEGLLEPLILRWEP
SPSPTTPIMGIIAGLVLLGVLVTGTVAAIMRRRKSAGKDGV
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggggtccgtggtgccgcgcatcttctttttgctgctggtgacctccctggccccaact
caggctggcgcgggctcacactccctgcggtatttcaccaccaccttgtacgatcctggc
taccgcaaacctcggttcaccgtcgtgggctacgtggacaacacacagatcgtgaacttc
gacagccacttggcgagtcagcgggtggagccgcgggtgccgtttatagcgcaggatcct
gagcatttggaggagctgacacgcctaggcagggggatcttaatacttggccgaatcgaa
ctgtggaccctgttcggttaccatagccagagagagaatgagtctcacactgtccagtgg
ctattcggctgtgacatagggccagaccgtcgcctcctccgtgggtataagcacgttgct
tatgaaggccaggattacatctctctaactgaggacctgcgctcctgggttgcggtggat
accgaggaggctcagatcaccaggcgcaagtgggaggcatctggtattgctacatcatgg
aggtctttcttggagggcaggtgcgtgaagtggcttctcaaatacctggataaagggaag
gagatgctgcagcgtgcagatccccccaaaacaaacgtggctcatcaccctagacctgaa
ggtgatgtcaccctgaggtgctgggccttggacttctaccctgctgacatcatcctgact
tggcaaagggatgaggaggacctgacccaggacatggaccttgtagagaccagacctaca
gggaatggaactttccagaagtgggcatctgtggtggtgccttcaggagaagagcataga
tacacatgccatgtgctgcatgaggggctgcttgagcccctcatcctgagatgggagcct
tcaccctcccccaccactcccatcatggggatcattgctggtctggttctccttggagtt
ttggtcactggaactgtggctgccattatgaggaggaggaagagtgcaggtaaggatggt
gtttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (18)   
   KEGG PATHWAY (18)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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