KEGG   Rattus norvegicus (rat): 309639
Entry
309639            CDS       T01003                                 
Symbol
Anks1a
Name
(RefSeq) ankyrin repeat and SAM domain-containing protein 1A isoform 2
  KO
K21413  ankyrin repeat and SAM domain-containing protein 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    309639 (Anks1a)
Membrane trafficking [BR:rno04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Others
   Others
    309639 (Anks1a)
SSDB
Motif
Pfam: Ank_2 Ank Ank_5 Ank_4 Ank_3 SAM_1 SAM_2 PID PTB PID_2
Other DBs
NCBI-GeneID: 309639
NCBI-ProteinID: NP_001101083
RGD: 1309183
Ensembl: ENSRNOG00000000498
UniProt: A6JJP3
Position
20:5965421..6118875
AA seq 1125 aa
MGKEQELLEAARTGHLPAVEKLLSGKRLSSGFGGGGGGGSGSGGGSGGGGLGSSSHPLSS
LLSMWRGPNVNCVDSTGYTPLHHAALNGHRDVVEVLLRNDALTNVADSKGCYPLHLAAWK
GDAQIVRLLIHQGPSHTRVNEQNNDNETALHCAAQYGHTEVVKALLEELTDPTMRNNKFE
TPLDLAALYGRLEVVKLLLSAHPNLLSCSTRKHTPLHLAARNGHKAVVQVLLDAGMDSNY
QTEMGSALHEAALFGKTDVVQILLAAGIDVNIKDNRGLTALDTVRDLPSQKSQQIAALIE
DHMTGRRSVKDVDKTSTAQLPLLSCTDAIAPKSLGSVEKAVTEPTLDSDILAEEEGPYEA
LYNAVSCHSLDSTASGRSSDRDSVNKEAEATGARAAGRERPPPPAKPPPDEEEEERVDKK
YLPLAASEGLALRPRMQGSAPQEEEEHPYELLLTAETKKLGTTDGRTEDHRQSGGSRSQD
SVEGQDGQVPEQFSGLLHGSSPVCEVGQDPFQLLTVPSQNHPESSQQDACQEASMQLEEP
GEQSTGAPQPGILDQSKRAGLSAGLTALASRTYLDALTHTVPLHPAGAEEEDGSRSRAPP
TSKPKAELKLSRSLSKSDSDLLTCSPTEDTTMGSRSESLSNCSIGKKRLEKSPSFASEWD
EIEKIMSSIGEGIDFSQEQQKISGSRTLEQSVGEWLESIGLQQYESKLLLNGFDDVRFLG
SNVMEDQDLREIGISDPQHRRKLLQAARSLPKVKALGYDGVSPASVPSWLDSLGLQDYIH
SFLSSGYSSIDTVKNLWELELVNVLKVHLLGHRKRIIASLADRPYEEPPQKPPRFSQLRC
QDLISQTSSPLSQNDSCTGRSADLLLPSVDTSRRRHDSLHDPGTTSRAEHFRVQEEPSES
KLTLRPPSLAAPYAPVQSWQHRPEKLIFESCGYEANYLGSMLIKDLRGTESTQDACAKMR
KSTEHMKKIPTIILSITYKGVKFMDASNKNVIAEHEIRNISCAAQDPEDLCTFAYITKDL
QTSHHYCHVFSTVDVNLTYEIILTLGQAFEVAYQLALQAQKSRTMAASAASMIETKSSKP
VPKPRVGMRKSALEPPDSDQEAPSHASVSWIVDPKPDSKRSLSTN
NT seq 3378 nt   +upstreamnt  +downstreamnt
atggggaaggagcaggagctgctggaggcggcccgcaccgggcacctcccggccgtggag
aagctgctgtccgggaagcggctctcctccggcttcggcggcggcggcggcggcggctcc
ggcagcggcggcggctccgggggcggcggcctcggctcttccagccaccctctctccagt
ctgctgagcatgtggagagggccgaatgtgaactgcgtagatagcaccggctacacgcca
ctacaccacgctgctttgaatggccacagggatgtggtcgaggttcttctgaggaacgat
gcgctgaccaacgttgctgactcgaaaggctgctacccactgcacttggcagcgtggaaa
ggagatgcccagatagtgcggctgctcatccaccaggggccctcgcacaccagagtcaac
gaacagaacaacgacaacgagacagccctgcactgcgcggcacagtacggccacacggag
gtagtgaaggccctgctggaggagctcacggaccccaccatgcgcaacaacaaatttgaa
accccgctggacctggcggcgctgtacgggcggctggaggtggtgaagctgctgctgagt
gcgcaccccaatctcctgagctgcagcactaggaagcacacccccctgcacttggcagca
aggaacggccacaaggccgtggtgcaggtgctgctggacgccggcatggacagcaactac
cagacggagatgggcagtgctttgcatgaagctgctttgttcggcaagaccgatgtggtg
caaatcctgctggctgcaggaatcgacgtcaacatcaaggacaaccgtggcctgactgcc
cttgacactgtccgagacctgccttctcagaagagccagcagatagctgcgctgattgaa
gaccacatgaccggaagaagaagtgtgaaagatgtagacaagacctccacagcccagcta
cctctcctctcctgcacagacgccatagccccaaagtctctggggagtgtggagaaggca
gtgactgagccgactcttgattctgacatcctcgctgaggaggagggtccctacgaggcg
ctctacaacgctgtgtcctgccattccttggacagcacggccagtgggcgatcgtcggac
agagactccgtgaacaaggaggccgaggccaccggagcacgggctgctggaagggaacgc
ccgccacctccagcaaagccgccgcctgatgaagaggaggaagagcgcgtagataagaag
tatcttcccttggcagcttctgagggcctggctttgagacccagaatgcagggcagtgcc
ccccaggaagaggaggagcacccatatgagctgctgctcacagcagagaccaagaagctg
gggaccacagacgggaggactgaagaccacaggcagagcggcggcagccggagccaggac
tctgtggaggggcaggacgggcaggtcccggagcagttctcaggtctcctccacggctcc
tccccagtgtgtgaggtggggcaggaccctttccagttgcttactgtccccagccagaac
caccccgagtcctcccagcaggacgcctgccaggaggccagcatgcagctagaggagccg
ggcgagcaaagcactggagccccgcagcctggcatcctggaccaaagcaagagagcgggc
ttgtccgcaggcctgacggccctggccagcagaacatacctcgacgcgttgactcacaca
gtacctctgcaccctgctggtgccgaggaagaagacgggtccagaagcagagcccctccc
accagcaagcccaaagcggagctcaaactcagccgcagtttgtctaagtctgactctgac
ctcctgacctgctcccccacggaggacaccacaatggggagccgcagcgagtccctgtcc
aactgcagcatcgggaagaagaggctagagaagtcgccttcctttgcctccgagtgggat
gagattgagaagatcatgagctccatcggcgaagggattgacttctctcaggagcagcag
aagatctcaggttctcggacgctggagcagagcgtcggggagtggctggagtcgatcggc
ctgcagcagtatgagagcaagctgctactgaacggctttgacgatgtccgcttcctgggg
tctaatgtgatggaagaccaggacctgagggagattggcatcagtgacccccagcaccgg
cggaagctgctgcaggctgcacgctccttgcccaaggtgaaggcccttggctatgatggg
gtcagccccgcctcagtgccctcctggctggactcgctggggctgcaggactatatccac
tctttcctgtccagtggctacagctccatcgacaccgtgaagaacctctgggagctagag
ctcgtcaatgtcctgaaggtccacctgctgggccaccgcaaacgcattatcgcctcgctt
gccgacaggccctatgaggagccgccccagaagcctccgaggttttcccagctaagatgc
caggatttaatctcccagacatcatccccgctcagccagaatgattcctgtacagggcgg
tcggcagacctgctgctgccctcggtagacacaagcagaaggcggcatgacagcctgcat
gaccccgggaccacctctcgagcagaacacttccgggtccaggaggagcccagcgagagc
aagctgaccctccgtccgcccagcctggctgccccctacgcccctgtacaaagctggcag
caccggccggaaaagctcatcttcgaatcctgtggttatgaggccaattacctgggctcc
atgctgatcaaggatctgcgcgggaccgagtccacccaagatgcctgtgccaaaatgcgg
aagtcgacggagcacatgaagaagattcccaccatcatcctgtccatcacatacaagggt
gtcaagttcatggacgcctccaacaagaatgtcatcgccgagcatgagatccggaacatt
tcctgcgccgcgcaggacccggaggacctctgtacctttgcctacatcaccaaggacctg
cagaccagccaccactactgccatgttttcagcaccgtggatgtgaacctgacctacgag
atcatcctgaccctggggcaggcatttgaggtggcctatcagctggccctgcaggcccag
aaatccaggaccatggcggcctctgcagcttcaatgattgagacaaaatcttccaaaccg
gtgcctaagcctcgggtcggcatgaggaagtctgcactggaacctcccgattctgaccaa
gaggccccgtcccacgctagtgtttcctggatcgtggacccaaagccagactcgaagcgg
agcctcagcaccaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (10)   
   Pfam (10)   
All databases (43)   

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