KEGG   Rattus norvegicus (rat): 309728
Entry
309728            CDS       T01003                                 
Symbol
Arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
  KO
K25857  AT-rich interactive domain-containing protein 5
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    309728 (Arid5b)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    309728 (Arid5b)
SSDB
Motif
Pfam: ARID
Other DBs
NCBI-GeneID: 309728
NCBI-ProteinID: NP_001101094
RGD: 1311735
Ensembl: ENSRNOG00000000635
UniProt: A6JKU7
Position
20:20305693..20489689
AA seq 1184 aa
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPKILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWAHSDFSKW
RCGLRATPVKTEGFGRNGQKEALLRYRQSTLNSGLNFKDVLKEKADLGEDEEENNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESV
CDEFAPNLKGRPRKKKTCPQRRDSFSGSKDPNNNCDGKVISKVKGEARSALTKPKNNHNN
CKKSSSEEKPKLSIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENNAQENENKTKVSGNKRIKQEMAKNKKEKENTPKPQDPSEVSSEQRKEEETLS
QKSVPEPLPAPEVKKKPEGHKDLVVRAPVSRADPEKGNETDQGSNCEKEAEEVGDKGLAP
LLPSPPLPPEKGSAPTPGAGKQPLASPSAQMDSKQEAKPCCFPESPENDLQGAPFSSLPT
TEQPLAVQPEAEEEKLPAMANYIANCTVKVDQLGSDDIHTALKQTPKVLVVQSFDMFKDK
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
KLIARDDQSQAHHSQSSDHMAISRPSVIQHVQSFKNKASEDRKSINDIFKHDKLSRSDAH
RCGFSKHQLGSLADSYILKQEAQESKDKLLEKRAVSHAHVPSLLADFYSSPHLHSLYRHT
EHHLHNEQSAKYAARDVYQESENGAFLSHKHPEKIHVNYLASLHLQDKKLAAAEASTDEQ
PTDLSLPKNPHKLTSKVLGLAHSASGSQEIKGTSQFQVISSQSRDCHPKACRVSPMTMSA
PKKYPESLARSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIA
GKKARAVSPLDPAKEASGKEKASEQESEGNKAAYSGHSGAASEGHKVPLSSPIFPGLYSG
SLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTSPTNSQQLYRHL
AAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
NT seq 3555 nt   +upstreamnt  +downstreamnt
atggagcccaactcactccagtgggtcggctcaccgtgtggcttacacggaccttatatt
ttctataaggcttttcaattccaccttgaaggaaaaccaaaaatcttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggatccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctcgaaactttatttccttcccgaa
gacactccccaaggccgaaatagcgaccatggcgaggacgaggtcatcgccgtctctgaa
aaggtgattgtaaagctcgaggacctcgtcaaatgggcgcattctgatttctccaagtgg
aggtgtgggctccgagccactccggtgaagaccgagggctttgggagaaatggccagaag
gaggctctgctcaggtacaggcagtcaacccttaacagtgggctcaacttcaaagacgtt
ctcaaggaaaaggctgatctcggggaagatgaggaagaaaacaacgtgattgtgctcagt
taccctcagtactgtcggtaccggtccatgcttaaacgcatccaggataagccatcgtcc
atcctcacggaccagttcgcgttagccctggggggcatcgcggtggtcagcagaaacccc
cagatcctgtactgccgggacacctttgatcaccccactctcatcgagaacgagagcgtg
tgtgatgagtttgcgccaaatctcaaaggcagaccacgcaaaaagaaaacatgtccccag
agaagagactccttcagtggctcaaaggaccccaacaataactgtgacggtaaagtcatc
agcaaggtgaaaggggaggccaggtcagccttgaccaagccgaaaaataaccacaataac
tgtaaaaaatcctcgagtgaagaaaagccaaagttgtccattggcgaagagtgcagggca
gatgaacaagccttcttagtggccctgtacaaatacatgaaagaaagaaaaacgcccatc
gagcgaattccctacttgggtttcaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacacatttacgac
gagttaggcggtaatcctgggagcaccagtgcggccacttgtacccgcagacactacgaa
aggttaatcctgccgtatgaaagatttattaagggggaagaagataagcctctgcctcca
atcaaacctcggaaacaggaaaataatgcacaggaaaatgagaataaaacaaaagtctcg
ggaaacaaacgcatcaaacaggaaatggccaaaaacaagaaagaaaaagagaataccccc
aaaccccaagatccgtctgaggtctcatcagagcaaagaaaggaagaagaaacgttaagc
cagaaaagtgtcccagagcctctcccagctccagaagtaaagaagaaaccagaagggcac
aaggatcttgtagtgagggccccagtgtccagagcagacccagaaaagggcaatgaaact
gaccaaggttccaactgcgagaaagaagctgaggaggtgggagataagggccttgcccct
ctgctcccaagccctcccttgccccccgaaaaaggttcggctcctacccctggggctggc
aaacagccccttgcctctcccagtgcccaaatggactcaaagcaagaagccaaaccctgc
tgctttccagagagccctgagaatgacctccagggagcaccgttctccagcctccccacc
accgagcaaccactggccgtccagcctgaagccgaggaagagaagcttcctgccatggct
aattacatcgccaactgcactgtgaaagtggaccagctgggcagcgacgacatccacact
gccctcaagcagaccccgaaggtcctcgtggtccaatcatttgacatgttcaaagacaaa
gacttgaccggccccatgaatgagaaccacggacttaactacacacccctgctttactcc
cggggcaaccctggtatcatgtccccactggccaagaaaaagcttttgtctcaggtgagt
ggggccagcctctccagcagctatccctatggctccccaccccccttgatcagcaaaaag
aaacttatcgccagggacgaccagtcccaggcccaccacagccaaagctctgatcacatg
gccatcagccggccatccgtaatccaacatgtccagagcttcaaaaacaaggcctctgaa
gacaggaagagcatcaacgacatcttcaagcatgacaaactgagccggtctgacgcccac
cgctgtggcttctccaagcaccaactcggctccctggcggactcctacatcctgaaacaa
gaggcacaggagagcaaggataaactgttggagaaaagagcagtctcccacgcccacgtg
cccagtttgctggccgatttctactcctccccgcatctgcacagcctctaccggcacacg
gaacaccatcttcataacgaacagtccgctaagtatgccgctagggacgtgtaccaggaa
tcggaaaacggcgcctttctttctcacaagcacccagagaagatacacgtcaattatctc
gcatctctccatctgcaagataagaagctggctgcggcagaagcctctaccgatgagcaa
ccaacagatctgagccttcccaagaacccacataaactgaccagcaaagtcctgggcctg
gcccactcagcctcaggatcccaggagatcaaaggcacctcccagttccaggtcatcagc
agccagagccgagactgtcatcccaaagcctgccgggtatcacccatgaccatgtcggcc
cctaaaaaataccccgagtcacttgcgaggtcaggaaagcctcaccacgtgagactggag
aacttccggaaaatggaaggcatggtccatcccatcctgcaccggaagatgagcccacag
aacattggagctgctcgccccataaagcgcagtctggaggatttagatcttgtgatcgcc
gggaaaaaagccagggctgtgtctcccttggacccagccaaggaggcttctgggaaagaa
aaggcctccgaacaggagagcgagggcaacaaagcagcctacagtgggcattctggggct
gcatcggaaggtcacaaggtccccctctcctcccctatcttcccaggtttgtattctggt
agcctgtgtaactcaggcctcaactccaggctcccggccgggtactcccattctctgcag
tacttgaagaaccagacggtgctttctcctctcatgcagcccctggctttccactcgctt
gtgatgcaaagaggaatttttacatcgccaacaaattctcagcagctgtacagacacttg
gccgcagccaccccggtaggaagttcctacggggacctgttacacaatagcatctaccct
ttagctgctatcaaccctcaggccgccttcccgtcttctcagctgtcatccgtacacccc
agcacaaaactgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   UniProt (1)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (7)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

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