KEGG   Rattus norvegicus (rat): 309887
Entry
309887            CDS       T01003                                 
Symbol
Ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
  KO
K18663  activating signal cointegrator complex subunit 3 [EC:5.6.2.4]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rno03400]
    309887 (Ascc3)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     309887 (Ascc3)
DNA repair and recombination proteins [BR:rno03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    309887 (Ascc3)
SSDB
Motif
Pfam: Sec63 DEAD ResIII Helicase_C AAA_22 Helicase_PWI T2SSE AAA_19 DUF1801
Other DBs
NCBI-GeneID: 309887
NCBI-ProteinID: NP_001263986
RGD: 1307995
Ensembl: ENSRNOG00000037604
UniProt: A0A0A0MY43
Position
20:55089430..55372374
AA seq 2201 aa
MALPRLTGALRSFSNVTKQDNYNEEVADLKLKRSKLHEQALDFGLSWKKIVKFLNEKLEK
NKMQTINEDLKDILQAAKQIVGTDNGNEAIESGAAFLFMTFHMTDSVGYTETKAIRQMFG
PFPSSSATSACNATSRIISHFSQDDLTALVQATENQCNDRVVFGRNLAFSFDMHDLDHFD
ELPVNGEAQKTISLDYKKFLNEQFQEPYTPELKPVEKSNGSLLWCEVEKYLNATLKEMTE
APRVEDLCCTLYDMLASAKSGDELQDELFELLGPGGLDLIEKLLQNRITIVDRFLNSSSD
HKFQVLQDNCKKILGENAKPNYGCQVTIQSEQEKQLMKQYRREEKRIARREKKAGEDGEV
SGEGLLPFDPKELRLQREHALLNARSAPILGRQRDTEVEKIRYPHVYDSQAAARETSAFI
AGAKMILPEGIQRENTKLYEEVRIPYSEPMPVGFEEKPVYIQDLDEVGQLAFKGMKRLNR
IQSIVFDTAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFHQGVLKKNEFKIVYVAPM
KALAAEMTNYFSKRLEPLGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVKLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAT
FLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVLKQVKAGHQVM
VFVHARNATVRTAMSLIERAKNSGQISCFLPTQGPEYGHALKQVQKSRNKQVRELFSDGF
SIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFV
DLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLESLADNLN
AEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAYGISHKAYQMDPTLRKHREQLLIEVGQ
KLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAE
EFDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVS
LNIYPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCKAYE
ALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIA
PLKALVRERMDDWKIRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQ
NRSYVQQVNILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL
ADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEQEMENIIATVRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEI
AGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGDVSQDAINKFLSHLIGQSLVELELSH
CIEVGEDNRSIEPLTCGRIASYYYLKHKTVKMFKDRLKPECSTEELLSILSDAEEYTDLP
VRHNEDHTNNELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAASQGWLVTTLNITHLIQMVIQGRWLKDSSLLTIPNIEQHHLHLFRKWK
PPVKGPHAKCRTSIECLPELIHACEGKEHVFSSMVEKELQPAKTKQAWNFLSHLPVINVG
ISVKGSWDDSVEGHNELSISTLTADKRDENTWIKLHADQQYVLQVSLQRVHFEFHKVKHE
SHAVTPRFPKLKDEGWFLILGEVDKRELVAVKRVGFVRTHHEASISFFTPEAPGRYIFTL
YLMSDCYLGLDQQYDIFLNVTKADISTQINTEVPDVSTDLA
NT seq 6606 nt   +upstreamnt  +downstreamnt
atggctttacctcgcctcacaggagccttgcgctccttttcaaatgtcaccaagcaagat
aattataatgaagaagtagctgacttaaagctgaagcgatccaaacttcatgaacaagct
ttagatttcggcctttcatggaagaagatagtgaagtttttgaatgaaaaactagaaaag
aataaaatgcaaactataaatgaagacttaaaagatatactacaagctgcaaaacaaatc
gttggaacggataatgggaatgaagcaattgaaagtggggctgcattcctctttatgacg
tttcacatgacagactctgttggttacacggagacaaaggctatcagacagatgtttgga
ccctttccatcatcctctgctacctcagcttgtaatgccactagtcggattatttcgcat
tttagtcaagatgatctcactgctttagtccaggcgacagaaaaccaatgtaatgataga
gtggtctttggtagaaacttagcattttcctttgacatgcatgatctggaccactttgat
gaattaccagtaaatggtgaagcccagaaaactataagcttagactacaagaagttcctg
aatgaacagtttcaggaaccctacaccccagaactcaagcccgtggaaaaatcaaatggc
tccttattgtggtgtgaagtagagaagtacttaaacgcaactctaaaggaaatgactgaa
gcaccaagagttgaagatctgtgctgtacgttatatgacatgcttgcttctgctaaaagc
ggggatgagcttcaggatgagctttttgaattgctgggacctggaggacttgatttgatt
gagaagctactccagaacagaattacaatcgtagatcgatttcttaattcctcaagtgat
cataagttccaagttcttcaagataattgtaaaaaaattttaggagagaatgcgaagcct
aattatggttgtcaagtcacgattcagtccgaacaagaaaagcagttaatgaaacagtat
cggcgtgaggaaaaaagaattgccaggagagaaaagaaggctggggaagatggggaagtt
tctggagaaggacttttgccctttgatcctaaggaactccgattacagagagaacatgcg
cttctgaatgctagaagtgctccaattttgggaaggcagagagacacggaggttgagaaa
attcgttatcctcatgtttatgattcccaggctgcagcccgagaaacatcagcatttata
gctggggccaagatgattttgccagaaggcatccagagagagaataccaagctgtatgaa
gaagtaaggatcccctatagtgaaccaatgcccgttgggtttgaggagaaaccagtttat
atccaggatttagatgaggtgggacagttggcttttaaaggaatgaagagactcaataga
atccagtctatagtatttgacacagcctacaacaccaacgaaaacatgctcatctgtgcc
cctactggagctgggaagaccaatattgcaatgctcactgtcttacatgaaatccgccaa
cactttcaccaaggtgttcttaaaaagaatgagtttaagattgtgtatgttgctccaatg
aaagccttggcagctgaaatgacgaattacttcagcaaacgtctagagccactgggcatt
gttgtgaaagaattgactggagatatgcagttgtcaaaaagtgaaattctacgaactcag
atgcttgtgaccacaccagaaaaatgggatgtagtaacaagaaagagtgttggggatgtt
gctctttcccaaattgtaaaactcctgattctcgatgaggttcacttgctgcatgaagac
agaggcccagtgctagaaagcatagttgcgaggaccttacggcaggttgaatccacacag
agtatgataagaatccttggcttatctgcaaccttgcccaactacctggatgttgctaca
tttttacatgttaacccctacattggtcttttctactttgatggccgttttcgacctgta
cctctgggacagacatttttagggattaaaagtgcaaataagatgcagcagttaaataac
atggatgaagtgtgctacgaaagcgttctgaagcaagtaaaggctggacaccaggtgatg
gtatttgtacatgctcgaaatgccactgtaaggacagctatgtctctaatagagagagca
aaaaacagtggccagatctcctgttttctccccacccaaggaccagagtatgggcatgca
ttgaaacaggtacaaaagtcaagaaataagcaagtgcgagagttattctcagatggcttt
agcattcatcatgccgggatgcttcggcaagacagaaatttggttgaaaatttgttctca
aatgggcacatcaaagtcctggtttgcacagccaccctagcctggggtgtcaatctccct
gcacatgccgtcattattaagggaacacaaatctatgctgccaaaagaggctcctttgtt
gaccttggaattttagatgtcatgcagatatttggccgagccggacgaccgcaatttgac
aaatttggggaaggaatcattataaccacacatgataaactcagccattacctcagtttg
ctcactcaacaaaacccgattgagagtcagtttctggaaagtcttgcagataacctaaat
gcagagattgcactaggaacagtcaccaatgtggaagaggcggtgaagtggatgagttac
acgtacctctacgtgcggatgagagcaaacccactcgcctacggcatcagtcacaaagca
taccagatggacccaacgttaagaaagcaccgagaacagctcctcattgaagttggacaa
aagctggataaagctaggatgattcgctttgaagaacgaactggctatttttcttccact
gatttgggtagaactgccagccactactatattaaatacaacaccattgagacattcaat
gaactctttgatgcacacaaaacagaaggtgatatctttgctattgtctccaaagctgaa
gaatttgatcaaattaaggtcagagaagaagaaatagaagaattagatgccttgttaaac
aatttctgtgaactctcagctccaggaggtgtggaaaatagttatgggaaaataaacatc
ctacttcagacctacatcagccgaggagagatggacagtttctccctcatatcagattcc
gcatatgttgcccagaatgcagctagaattgtccgtgctctctttgaaattgcactgagg
aaacgttggcctaccatgacctacaggcttttgaatcttagtaaagtcattgacaagaga
ctctggggttgggctagccctttgagacaattttctgtgttaccaccacacatcctaaca
agattagaagaaaaaaaccttacagtggataaactcaaagacatgagaaaagatgaaata
ggtcacattttgcatcatgtgaatattggactgaaggtcaaacagtgtgttcatcagatt
ccttctgttacaatggaagcttccattcagcccatcacacggactgtcctccgagtctca
ctgaacatctaccctgatttctcttggaatgatcaggtccatggcacagtaggggaaccg
tggtggatctgggtagaagatcctacaaacgaccatatttatcactcggagtactttcta
gctcttaaaaaacaggttattaataaagaagctcaacttctggtatttacaatccctatt
tttgagcctttgccctctcagtactacattcgagcagtatctgatagatggctaggagct
gaagctgtttgcattatcaactttcaacatctgattctaccagagagacatcctccccat
acagaattattggaccttcagcctttgccagtcacagccttggggtgcaaagcatatgaa
gctctgtataacttcagccacttcaacccggtgcagacacagatattccacacgctgtat
cacactgactgtaacgtcctacttggagcccccacggggtcaggaaagacagttgcagct
gaactcgccattttcagagtcttcaacaagtatcccacttccaaggcagtatatattgca
cccctcaaagctctagtacgtgaaagaatggatgattggaaaattagaatagaagaaaaa
cttggtaaaaaagttattgaactgactggggatgtgactccagacatgaaatccattgct
aaggctgaccttatcgtcactacaccagaaaagtgggatggcgtcagtcgaagctggcag
aacaggagctacgttcagcaggtcaacattctcatcatagatgagatccacctgctaggt
gaggagagaggtccagttctagaagtcattgtatctcgaacaaactttatctcatcgcac
acagagaagcctgttagaatagtcggactgtccactgccttagccaatgctagagacctt
gctgactggctcaacattaagcagatgggtttgtttaacttccgaccttctgtgcgccct
gttccactggaagttcacattcaaggtttcccaggacaacattactgcccacgcatggct
agtatgaacaagcctgcattccaggcaattagaagtcattctccagccaaacctgttttg
atatttgtctcctcaagacgtcaaacacggcttacggctttagagttgatagctttcctg
gccactgaagaagacccaaagcagtggttaaacatggacgagcaagagatggagaacatc
attgcaacagtgcgagattccaaccttaagctgactctagcttttggaataggaatgcat
catgctggactacatgaaagagaccgaaaaactgtggaagagctgtttgtgaactgtaaa
gtgcaggttctcattgcgacaagcacgttagcatggggtgtaaactttccagcacactta
gtcattattaagggaactgaatactacgatggaaagacaagacgctatgtggatttcccc
atcacagatgtactgcagatgatggggcgagctgggagacctcagtttgatgaccagggc
aaagctgtaattctagttcatgatataaaaaaggatttttataaaaagtttctttatgaa
cctttcccagtggaatcgagcttattaggagtgttgtctgaccacttaaatgcagagatt
gcgggaggtacaataacatcaaagcaagatgccttggattatatcacttggacttacttt
ttccgacgtcttatcatgaatcccagctactacaacttgggggacgtcagccaggacgcc
ataaacaagttcctgtcacatctgattgggcaatctctggttgagttggagctttcccac
tgcattgaagttggagaggacaatcgcagcattgaaccactgacatgtggccgaattgcc
tcctattactatctgaagcacaagacagtcaaaatgttcaaggaccgtttaaagcctgag
tgcagcactgaagaattgctgtcaattctaagtgatgcggaagaatacacagacttgcca
gtaagacacaatgaggaccatacgaataatgaactggccaaatgtcttcccattgaatta
aatcctcattcatttgacagccctcacaccaaagcccatctcttgcttcaagcacatctc
agccgagccatgctgccctgcccagactatgatactgataccaaaacagtcttagatcaa
gctctcagagtatgccaggcaatgctggatgtggctgcaagccaaggatggctagtgact
accctgaatatcacccacctgattcagatggtgatccaaggccgatggctaaaggactcg
tctcttcttaccataccaaacatagaacagcaccatcttcaccttttcaggaagtggaaa
ccacctgtaaagggcccacatgctaagtgccgaacatccattgagtgccttcctgagctg
atccatgcctgtgaagggaaggagcatgtgttcagctccatggtagagaaggagttacag
cctgcgaaaacaaagcaggcatggaatttcttatctcacttgcccgtgataaatgttggc
ataagtgttaaaggctcctgggatgactcagttgaaggacataatgaactctccatctca
actctgacagcagacaaacgggatgaaaacacatggatcaagttgcatgctgatcagcag
tatgtgcttcaagtcagcctacagagagtccattttgagttccacaaggtaaaacatgag
agtcacgcagttactcctcgatttccaaaattaaaagatgaagggtggtttttgatatta
ggagaagtggataagagagagctggtggctgtaaaacgcgtaggatttgttcgaactcat
cacgaggcttccatctctttctttactccggaagcacctggaagatatatctttaccctg
tatctcatgagtgactgttacctcggcctagaccagcagtatgacatctttctcaatgtc
acaaaagcagacatctccacccagatcaacacagaagtccctgatgtctcaactgacttg
gcataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   UniProt (1)   
   RefSeq(pep) (10)   
DNA sequence (16)   
   RefSeq(nuc) (12)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (47)   

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