KEGG   Rattus norvegicus (rat): 309918
Entry
309918            CDS       T01003                                 
Symbol
Ell2
Name
(RefSeq) RNA polymerase II elongation factor ELL2
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    309918 (Ell2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rno01009]
    309918 (Ell2)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rno03021]
    309918 (Ell2)
Protein phosphatases and associated proteins [BR:rno01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     309918 (Ell2)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     309918 (Ell2)
    Little elongation complex (LEC)
     309918 (Ell2)
SSDB
Motif
Pfam: ELL Occludin_ELL
Other DBs
NCBI-GeneID: 309918
NCBI-ProteinID: NP_001414139
RGD: 1309296
Ensembl: ENSRNOG00000027089
Position
2:6910446..6990654
AA seq 640 aa
MAAGGAAGLREEQRYGLACGRLGQDNITVLHVKLTETAIRALETYQSQKSLIPFQPSIQF
QGLQGLMKIPKNDPFNEVHNFNFYLSNVGKDNPQGSFDCIQQTLSSSGASQLNCLGFIQD
KITVCATNDSYQMTRERMTQAEEESRNRSTKVIKPGGPYVGKRVQIRKAPQAISDAVPER
KRSTPMNPANTIRKMHGGSSVSQRPYRDRVIHLLALKAYKKPELLARLQKDGVNQKDKNS
LGAILQQVANLNPKDLSYTLKDYVFKELQRDWPGYSETDKQTLDLVLSRKLNPSQNAGTS
RPESPMCSSKDAASSPQKRPLDSDFIDPLTNKKARISHLTNRVPPTLNGHLNPTNEKSCA
SLLPPPAAAAIPTPSPLPSTHLPVSNPTQTVNSNSNSPSTPEGRGTQDLPVDSFSQNSSI
FEDQQDKYTSRTCLEETLPSSSALLKCPKPMEEEHPVSHKKSKKKSKKHKEKDQIKKHDI
ESREEKEKDLQREETAKLSNDSPNPNEGVKEECTASMEPSSTIELPDYLIKYIAIVSYEQ
RQNYKDDFNAEYDEYRALHARMETVARRFIKLDAQRKRLSPGSKEYQNVHEEVLQEYQKI
KQSSPNYHEEKYRCEYLHNKLAHIKRLIGEFDQQQAESWH
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggcggcggggggtgctgcggggctgcgggaggagcagcgctacgggctggcgtgcggg
cggctggggcaggacaacatcaccgtgctacatgtgaagctcaccgagacggcgatccgg
gcgctggagacttaccagagccaaaagagtttaattccttttcaaccttcaattcagttc
caaggactccaagggcttatgaaaattcccaaaaatgatcccttcaatgaagtccacaac
tttaacttctatttgtcaaacgtggggaaagataaccctcagggcagctttgactgcatc
cagcaaacactctctagctctggagcctctcagctcaattgcctgggatttatacaggat
aaaattacagtgtgtgcaacaaatgattcctatcaaatgactcgagaaagaatgacccag
gccgaggaggaatcccgtaatcgaagcacaaaagttatcaaacccggtggaccatatgta
gggaaaagagtgcaaattcgtaaagcacctcaagccatctcggatgcagtgcctgagagg
aaaaggtcaacgcccatgaaccctgcaaatacaattcgaaagatgcatggtggcagcagt
gtctctcagaggccgtacagggacagagtcattcatttactggcactaaaagcctataag
aaacctgagctgcttgcccgactgcagaaagatggtgtcaatcaaaaagacaagaactcc
ttgggagcaattttgcaacaggtggccaatctgaatcctaaggacctctcctatacttta
aaggattatgtatttaaggagctccagcgggactggccaggttacagtgagacagacaaa
cagacactggatttggtgctctctagaaaattaaatccatctcagaatgctggcactagc
cggccagagtctcccatgtgttccagcaaagatgctgcctcatctcctcagaaacgacct
ttggattcagatttcattgatcctttaacgaacaaaaaagctcgaatatctcacctgaca
aacagagtcccaccgacattaaatggccatttgaatcccaccaatgaaaaatcttgtgca
agccttctaccgccccctgcagctgctgccatccccaccccctcaccactgccttcaacc
cacctgcctgtctccaatcctacccagactgtaaattccaactccaattcccctagcact
ccagaaggccgggggactcaagacctacctgttgacagttttagtcaaaacagtagcatc
tttgaggaccagcaagacaaatatacctcaaggacttgtctggaggaaacattaccctct
agctcagctttactaaagtgtccaaagcccatggaagaagaacatccagtgtctcacaaa
aagtccaaaaagaagtctaaaaaacacaaggaaaaggaccaaataaagaaacatgacatt
gagagcagggaggaaaaggagaaagaccttcagagagaagaaactgccaagctgagtaat
gacagtccaaatcccaatgaaggagttaaagaagagtgcacagcttccatggagccttct
tcaacaattgaactcccagattatttgataaaatatattgctattgtctcttatgaacaa
cgccagaattacaaggatgacttcaatgctgagtatgatgaatatagagctttgcatgcc
aggatggagactgtagccaggagatttattaaactggatgcacaacgaaaacgcctttct
ccaggttcaaaagagtatcagaatgttcatgaagaagtcttacaagaatatcagaagatc
aagcagtccagtcccaattaccatgaagaaaaatacagatgcgagtatcttcataacaag
ctggctcacatcaaaagactaataggtgaatttgaccaacagcaagcagagtcgtggcac
tag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

Download RDF
DBGET integrated database retrieval system