KEGG   Rattus norvegicus (rat): 310097
Entry
310097            CDS       T01003                                 
Symbol
Snx18
Name
(RefSeq) sorting nexin-18
  KO
K17923  sorting nexin-9/18/33
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    310097 (Snx18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    310097 (Snx18)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    310097 (Snx18)
Membrane trafficking [BR:rno04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    310097 (Snx18)
  Macropinocytosis
   Sorting nexins
    310097 (Snx18)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   310097 (Snx18)
SSDB
Motif
Pfam: BAR_3_WASP_bdg PX SH3_9 SH3_2 SH3_1 Vps5 BAR XFP
Other DBs
NCBI-GeneID: 310097
NCBI-ProteinID: NP_001101122
RGD: 1310367
Ensembl: ENSRNOG00000010971
UniProt: D3ZZ38 A6I5R6
Position
2:complement(46965498..46991516)
AA seq 615 aa
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGINSRGDRGLFPASYVQVIR
APEPGPPADGGPGAPARYANVPPGGFEPLPAAPPAAFQPLLQPQASPGSFQSPGAGFTYG
GGAPQPSPQQLYGAYQASLGSDDDWDDEWDDSSTVADEPGALGSGAYPDLDGSSSAGGGA
AGRYRLSTRSDLSLGSRGVSAPPPHQASGAKSSATVSRNLNRFSTFVKSGGEAFVLGEAS
GFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKLVPTHTQVPV
HRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWMNHMASHPVL
AQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALDLQEVESKID
GFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFELDQQAFSVGL
NQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQKGALTKVKES
RRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQQIIFFQK
VTQKLEEALHKYDSV
NT seq 1848 nt   +upstreamnt  +downstreamnt
atggcgctacgcgcccgggcgctctacgactttaggtccgagaaccccggtgagatctcc
ctgcgggagcacgaggtgttgagcttgtgcagcgagcaggacatcgagggctggcttgaa
gggatcaacagccgcggcgaccgcggcctcttcccggcttcgtacgtgcaggttatccgt
gcgccggagcctggccctccggccgacggcggcccaggagctccggcccgctacgccaac
gtgccgcccggcggcttcgagcctctgccagccgcgccgcccgctgccttccagccgctg
ctgcagccgcaggcgtcgcccggttccttccagtcgccgggcgccggctttacctacggc
gggggcgccccgcagccgtcgccccagcagctctacggtgcttaccaggccagcctaggc
agcgacgatgactgggacgacgagtgggacgacagctccacagtggcagacgagccaggc
gcgttgggcagcggtgcgtacccggacctcgacggttcgtcctcagcgggcggcggcgcg
gccggccgctaccgcttgtccacacgctcggacctgtcgctgggctcccgtggcgtctca
gcgcccccgccgcatcaagcgtctggagccaagagctccgccacggtgagccgcaacctc
aatcggttctccaccttcgtcaagtcgggcggggaggcgttcgtgctgggagaggcgtca
ggcttcgtgaaggatggggacaagctgtgcgtggtgctgggtccctacggccccgagtgg
caggagaacccctaccccttccagtgcaccatcgacgatcccaccaagcagaccaagttc
aagggtatgaagagctacatctcttacaagctggtgcccacgcatacccaggtgcccgtg
cacaggcgctataagcacttcgactggctgtatgcgcgcctggcggagaaattcccggtc
atctcggtgccccatctgcccgagaagcaggccaccgggcgcttcgaggaggacttcatc
tccaagcgcaggaagggtctgatctggtggatgaaccacatggccagtcacccagtgctg
gcccagtgcgacgtcttccagcatttcctgacctgccccagcagcactgatgagaaggcc
tggaaacagggtaagcggaaggctgagaaggatgagatggtgggcgccaacttcttcctc
actctgagcacaccacctgcggccgccctggacctgcaggaggtggaaagcaagatcgat
ggcttcaaatgcttcaccaagaagatggatgacagcgcgttgcagctcaaccacactgcc
aacgagtttgcgcgcaagcaggtgactggcttcaagaaggagtatcagaaggtgggccag
tcctttcggggcctcagccaagcctttgagctggatcagcaggccttctccgtgggtctg
aatcaggccattgccttcaccggagacgcctatgatgccatcggtgaactcttcgctgag
cagcccaggcaggacctggacccagtcatggacctgttagcactgtatcaggggcacctg
gccaacttcccagacatcatccatgttcagaaaggagctcttaccaaagtaaaggagagt
agacgacacgtggaagaagggaagatggaggtccaaaaggccgacggcattcaagaccgc
tgtaacactatttccttcgccacgttggccgagattcatcacttccatcaaattagagta
agagactttaaatcacagatgcagcattttttacaacaacaaataatatttttccaaaaa
gtgacacagaagttggaagaagctcttcataaatatgacagcgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (23)   

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