KEGG   Rattus norvegicus (rat): 310288
Entry
310288            CDS       T01003                                 
Symbol
Hps3
Name
(RefSeq) BLOC-2 complex member HPS3
  KO
K20190  Hermansky-Pudlak syndrome 3 protein
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rno04131]
    310288 (Hps3)
Membrane trafficking [BR:rno04131]
 Endosome - Lysosome transport
  Others
   BLOC-2 complex
    310288 (Hps3)
SSDB
Motif
Pfam: HPS3_N HPS3_C
Other DBs
NCBI-GeneID: 310288
NCBI-ProteinID: NP_001101134
RGD: 1310548
Ensembl: ENSRNOG00000031406
UniProt: D3ZGG8 A6IHC6
Position
2:complement(104413618..104455091)
AA seq 1002 aa
MVRLYNLHPFGSQQVVPCQREPEQFCCGGSDALFVASGCKVEAFAVQGAELSRQRCTFST
LGRVLRMAYSEAGDYLVAIEEKNKTVFLRAYVNWRSKRNDNSRVCIRMVGHKMEASFCES
FRDQMSIIEMPMSEAPLCISCCPVKGDLLVGCTKKLVLFTLKYDVVNEEFSMLNFERSLI
IHINNITPVEISFCVGYVAVMADLEVLLLKLESDPIHGEGVNHHPQESINPLEQTEDVSN
ETSQLESEDFVICLKPLELFGEKCKQSGISVKLESTGLEDEKVKYLHVQHLLYRRFAPDI
SFYGLSDNIKLHSLQLLPIHQTGFHPDEKDLSQKKEVPSLFCFFSLPHAGYLYMVVKSVT
LLSVYWYPEKSQQAVLTPQFLHVITSQSLQCFTVRCSAAVAHEEDLYMDTTLKACPPVSM
DVCALRIQLFIGLKAICHFKNHIILLTKAEPEDIPERRESPKRLLSRKDASVKSRIPHVA
EAGWNLYIVNTTAPVQLYKEMVDYSNSYKTVKTESCLHLLSEAHLLVRAALMDVSQLEPA
EKAELLEAFKESCGHLGDCYSRLNTEQAHLALPYYKMSGLSLAEVLARVEWTEGNESQKY
ERGLIFYINHSLYENLDEELSEELAGKVAQIFHVAEPKQLPHVLSSPSMKNIDPLIALHY
LRKLDTCGASPVLVTLTKAAVALKMGNLDMYRNEMKSHSEMQLVYGFILEPRLLIQQWKG
QIVPTELAIDLKETQPGLLVASVLGLQKNGKIGIEEADSFFKVLCGKDEDMVPQLLVDFW
EAQLVACLPDVVLEELFFKLISQYVWRLSKRHCPDTLPLRTAEDLINACSHYGLVYPWVH
VLMTSDSLADKNYTEDLLKLQSLICSPSLDIVSVIPYLEPLSEDTVAGLSAQVLCHTRLQ
EYEKCIDTLLERCPEAVIAYANRELKEEHWILWWKKLLPELCHRVKCGGDRYHLHLSLLK
ETLSVVAVGLDLRDFLNVLPEDGVAAFFLPYLLFCSRKKSLT
NT seq 3009 nt   +upstreamnt  +downstreamnt
atggtgcgtttgtacaacctgcacccgtttgggtcgcagcaggttgtcccctgccagcgg
gagcccgagcagttctgctgcggcgggagcgacgcgctgttcgtggcttccggctgcaag
gtggaggcgtttgctgttcagggcgcagagctaagccggcagcgatgcaccttctccacg
ctaggcagggttctgcgcatggcctacagcgaagccggagactatctggtagcaattgaa
gagaaaaacaaaactgtattcctgcgtgcttacgtgaattggaggagtaagaggaatgac
aactctcgtgtgtgcattcgaatggttgggcacaaaatggaggcatccttctgtgaaagc
tttagagaccagatgtctataattgaaatgccaatgtccgaggcccctttgtgcatttca
tgttgtcctgtgaaaggagatctacttgttggatgtacaaagaagttagtcttatttact
ttgaagtatgatgtcgttaatgaggaattctcaatgttgaactttgaacgttcattaatt
atacacataaataatatcactcctgttgaaatctctttttgtgttggatatgttgctgtc
atggctgatttagaagtcttactcctaaaactggagtcagaccctatacatggagaggga
gttaaccaccacccacaagaaagcatcaacccattggaacagacagaagatgtcagtaat
gaaacttcacagcttgagtcagaggattttgttatctgcctaaaacctttggaacttttt
ggtgaaaaatgtaaacagtctggaatatctgttaagctggagtccacaggattagaagat
gaaaaagtaaaatatttacatgttcagcatctgctgtatagacggtttgctccagatatt
tcattctatggtttgtctgataacatcaagttacattcccttcaactgctgcccattcac
caaactggttttcatcctgatgaaaaagatttgtctcagaaaaaagaggtgccaagtctc
ttctgtttcttctcattaccccatgcgggctacctgtacatggtggtgaagtctgttacg
ttactgtcagtctattggtatcctgagaagtctcagcaagccgtgctcacaccacaattc
ttgcatgtcatcacaagccaaagcctgcagtgtttcacggtacgatgcagcgcagcggtg
gctcatgaggaggacctatacatggacactacactaaaggcctgcccacctgtcagtatg
gatgtctgtgctctaaggatacagctcttcataggtttgaaagccatctgtcactttaaa
aaccacatcatacttctgacgaaggcagagcctgaggacatcccagagagacgcgagtca
cccaagagacttctttctagaaaagatgccagtgttaagagcaggatccctcacgtagct
gaggctggatggaatctgtatatcgtgaataccactgcaccagttcagctatacaaagaa
atggtagactatagtaacagctacaagactgtgaaaaccgagagctgtctccacttgctc
agcgaggctcatctgctagtgagagctgccctgatggatgtcagtcagctagagcctgca
gagaaagcagagctcctggaagctttcaaagaaagctgcgggcaccttggagactgttac
agcaggcttaacactgagcaagcccatctcgccttgccatactataagatgtctggtttg
tctctggctgaagtcttggctcgtgtggaatggacagaagggaatgaatcacagaaatat
gagagaggattaatattttatattaatcattctctttatgagaacctggatgaagaatta
agtgaagaattagctggaaaagtggctcagatatttcatgtggctgagccgaagcaactg
cctcatgttctctccagtccgtctatgaagaatattgatcctttaattgccttgcattac
ttaaggaagctggacacctgtggggcttcaccagtcttagtgaccttgaccaaggctgca
gtggccttgaaaatgggaaatcttgacatgtacaggaatgaaatgaaaagccattcagag
atgcagctggtgtatggcttcattctggaacctcggctgttaattcaacagtggaaagga
cagattgttcctacggaacttgcaattgacttgaaggaaactcagcctggattgcttgtg
gcttcagtcctgggcttacagaagaatggtaaaattggaatcgaagaagcagattctttc
tttaaggtgctgtgtggaaaggatgaagacatggttccgcagcttttggtagacttctgg
gaagctcagctcgtagcttgtctcccagatgtggttcttgaggaactctttttcaagctc
atatctcagtacgtctggaggttatctaagaggcattgtcctgataccttaccattgaga
acagcagaggatttgataaacgcctgcagtcattatggcctagtatatccatgggttcat
gtcttaatgacgtctgattccttagctgataaaaattacacagaagaccttttgaaacta
cagtctctcatatgtagcccttcattggacatagtttccgttattccatatctggagcca
ctctcagaagacactgttgctggcctcagcgctcaagttctatgtcatacacgcttacaa
gaatatgaaaagtgcatagacacattgctagagagatgcccagaggcggtcattgcatat
gctaaccgggaactgaaggaagagcactggattctgtggtggaaaaagctactgcctgaa
ctctgtcacagagtcaagtgtggcggagacagataccaccttcacctgtcattgctaaaa
gaaaccttgtcggttgttgctgtgggactggacctgagggatttcttgaatgttctccca
gaagatggggtggcagcattttttctgccctacctccttttctgcagccggaagaaatca
ctaacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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