KEGG   Rattus norvegicus (rat): 310315
Entry
310315            CDS       T01003                                 
Symbol
Ccdc39
Name
(RefSeq) coiled-coil domain-containing protein 39
  KO
K23729  coiled-coil domain-containing protein 39
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    310315 (Ccdc39)
   04990 Domain-containing proteins not elsewhere classified [BR:rno04990]
    310315 (Ccdc39)
Cilium and associated proteins [BR:rno03037]
 Motile cilia and associated proteins
  96 nano-molecular ruler
   310315 (Ccdc39)
Domain-containing proteins not elsewhere classified [BR:rno04990]
 Other domain-containing proteins
  Others
   310315 (Ccdc39)
SSDB
Motif
Pfam: APG6_N
Other DBs
NCBI-GeneID: 310315
NCBI-ProteinID: NP_001401969
RGD: 1306277
Ensembl: ENSRNOG00000011440
UniProt: D3Z8K2 A0A0A0MY52
Position
2:complement(118593881..118631584)
AA seq 934 aa
MSSEFLSELHWEDGFAIPVANQENKILEDQLAKLHKEKSNLQDQLRDYEDRINSMSSHLK
NVNQEFLFTQSLYKARECEIESEEHFKAIAERELGRVKDEIQQLEKEMAIILERKNDKEN
AIFKATQKLDGLKCQMNWDQQALEAWLEESAHKDSDSLTLQKYSQQDNNKIRALTLKLEK
LTMECNEKRKLLDNELTETLSAQLELDKAAQDFRKIHVERQELIQQWENTIEQMQRRDQE
IDNCALALARIKQEAREKEGVVREKIKFLENEVGNNVEYERRISIAERKVSKCRMEYQRQ
EANRNQLKDELDTLKTTLNRTSSDLEALRKNISKVKKDILDETGRLQKLKHHNEIVKHKL
KMITEKTISIEEKATNMEDMLKEEEKNLKEVEVQLNIVKGVLFKKVQELQSAITKEKALG
SEIEGTRSSLKHLNQRLHKLDFETLKQQEIMYSQDFYIQQVERRMSRLKGEINSEEKQAL
EVKIVELRKTMEERKSTLSLLEEQIKKLHNDLYFIKKSNGKNKDEKESLMNKIGELHLFV
DRSEKELNKAKAVKEDLMIEDNLLKLQVKRARELLYSKAEEVLSLEKRKQQLCTAMEERV
EEIKVHKAMLTSQIRYVDQQRQTVSSEFHERLSKIDKLKNRYEILTVVMLPPEGEEEKTQ
SYYVIKAAQEKEELQREGDSLDAKISKAEKEIYALQNTLQVLSSCNNNYKQSFKKVTPSS
DEYGIKIQLEEQKRSADEKYRCKQRQIRELQEDIQSMENTFEVIEHLANNAREKLSEKQT
LSFQLRKETEEQKPKIQRVTKQCGRLRREIRILRQTNDETLEEQDIQLREIIQFHKDIDQ
MLVNAMENAEIHVIFQTYFQQNGLELPTAKGPSSRSSSQSSLSSIRSLEDSIPISPPTAK
VIELRFPGPPARSDSSRSSSGSNSNIPKGKKLNK
NT seq 2805 nt   +upstreamnt  +downstreamnt
atgagcagtgagttcctgtcagaactgcactgggaagatgggttcgccattcccgtggcc
aatcaggagaacaagatcctggaggaccagttagcaaaactacacaaagaaaaatcaaac
ttgcaagatcagcttcgcgactatgaagatcgaattaattctatgtcttctcaccttaaa
aatgtcaatcaagagtttttatttacacagtctctttacaaagcaagggagtgtgaaatc
gaaagtgaagaacattttaaggccattgctgaaagagagctgggacgagtcaaggatgag
atccaacagctggagaaggagatggccatcatcctcgagcgcaagaacgacaaggaaaat
gctatatttaaagctactcaaaagctggatggcttgaaatgtcagatgaactgggaccag
caagcactggaagcctggctagaagagtctgctcacaaagacagcgactcgctcaccctt
cagaagtactctcagcaagacaataacaagatcagggccctgactctgaagttagaaaag
ctgaccatggagtgtaatgagaagaggaagcttctagacaatgaactcacggagacgcta
agtgcgcagttagaattagataaagctgcacaggatttccggaagatccacgtagaacga
caggagctcattcagcagtgggagaacaccattgagcagatgcagaggcgggatcaggag
atagacaactgcgctctggcattagcacggataaagcaggaagcaagagaaaaagaaggt
gtggtgagagagaagatcaagtttctggagaatgaggttgggaacaacgtagagtatgaa
cgaagaatttctattgctgagcgtaaagtgtcaaagtgcaggatggagtaccagcgacag
gaagccaacagaaatcagctgaaggatgagctggatactttaaaaaccactctcaataga
acatccagtgatttagaagctctgaggaaaaacatttccaaagtaaagaaggacatcctt
gatgaaacaggaagattacaaaaactcaaacatcacaatgagattgtaaaacataaatta
aagatgataactgagaagaccatatccattgaagagaaagctaccaacatggaagacatg
ctgaaggaggaggagaaaaatttgaaggaagtggaggttcaattgaacatagtaaaaggt
gtgctatttaagaaagtccaagagttacagagtgcgataacaaaagagaaagctctggga
tcagaaattgaaggaacccgttcttccttgaaacatcttaaccaacggttacacaaactg
gactttgaaaccctgaagcagcaggaaattatgtacagtcaggatttttacatccagcaa
gtagaacgcagaatgtcacgattaaaaggagaaattaattcagaggaaaagcaagccctt
gaagtaaaaatcgttgaacttaggaagacaatggaagagagaaaatctacactttccctt
ttggaagaacagatcaagaagctccataatgacctctacttcattaagaagtcaaatggt
aaaaacaaagatgagaaagagtctctcatgaataaaataggtgaactgcaccttttcgtt
gatagatccgagaaggaactgaacaaagccaaagctgtgaaagaggatttgatgattgag
gacaatcttttaaagcttcaagttaaacgtgctcgagaactgctttatagcaaagcagag
gaagtcctttctctggagaaaaggaaacagcagctgtgcacagccatggaagagagagtt
gaagaaattaaagtgcacaaagccatgcttacctcacagatcagatatgttgaccagcag
cgacaaactgtgagttctgaatttcatgagcggctaagtaaaattgataagcttaagaac
agatatgaaattcttactgttgtcatgctgcctcctgagggagaagaggagaaaacacag
tcctattatgtaataaaggctgctcaagaaaaagaagaacttcaaagggaaggtgacagc
ttggacgctaagatcagcaaagctgaaaaagaaatctatgctctgcagaacaccttgcaa
gttctgagcagctgcaacaacaattacaagcaatctttcaaaaaagtgacgccgtcaagt
gatgagtacggaataaaaattcaactagaagaacaaaaaagaagcgcagatgagaaatac
agatgcaaacaaagacaaatcagagaacttcaagaagatatccagagcatggagaatact
tttgaagttatagaacacttagcaaataatgccagagagaaattatcagagaagcaaacc
ctctcatttcaacttcgtaaggagactgaagagcagaagccgaaaatacagcgagtaact
aagcagtgtggaagactcagaagagaaatccgcattttgagacaaacaaatgatgaaact
ctagaagaacaagacattcagctccgtgaaatcatacagtttcacaaggacattgaccaa
atgctagttaatgccatggaaaatgcagaaattcatgtcatctttcaaacatattttcag
cagaatgggttagaactacctacagcaaaaggcccaagctcaagatcgtcttcccagtcc
tcactttcctcaatcaggtcgctggaggactcaattcccatctctccacccacagctaaa
gtgatagagctcagattcccaggacctccggcaagaagtgatagttctaggtctagtagt
ggcagcaattccaacatccctaaaggaaaaaagctcaacaaataa

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