KEGG   Rattus norvegicus (rat): 310461
Entry
310461            CDS       T01003                                 
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    310461 (Dhx36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rno03019]
    310461 (Dhx36)
Messenger RNA biogenesis [BR:rno03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     310461 (Dhx36)
SSDB
Motif
Pfam: OB_NTP_bind DEAD HA2_C Helicase_C HA2_N AAA_22 AAA_19 nSTAND3 PhoH ATPase AAA_14 AAA_23 DUF6782
Other DBs
NCBI-GeneID: 310461
NCBI-ProteinID: NP_001101148
RGD: 1308767
Ensembl: ENSRNOG00000014599
UniProt: D4A2Z8
Position
2:complement(149006089..149044192)
AA seq 1000 aa
MSYDYHQSWSRDGGPRGSGQGSGGGGGGSRGSGGGGGGRGGRGRHPAHLKGREIGLWYAK
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGYGTEV
SSEKKINSEKKLDNQEKKLLNQEKKTYRITDKSYIDRDSEYLLQQNEPNLGLDQQLLEDL
QKKKTDPRYIEMQRFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGIGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYFPEQKEHRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPAYIKELQTRYSASTIDVLEMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSDEAVV
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVD
WNDTKSRDCAVLSAILDLIKTQEKAIPRNLPPRSQDGYYS
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgagctacgactatcatcagagctggagccgcgacgggggcccacggggctccggccag
ggctctggcggcggcggtggagggagccggggctccggcggcggcggagggggccgcggc
ggccggggccggcatccggcccaccttaagggtcgcgagataggcctatggtacgcaaaa
aagcaaacgcagaagaacaaggaggctgagagacaagagagagctgtagtgcacatggat
gaacggcgagaagagcaaattgtgcagctgctaaattcagtccaagcaaagaatgataaa
gattcagaagcacagatatcctggtttgctcctgaggatcatgggtatggtactgaagtt
tcttcagagaaaaaaataaactcagagaagaaacttgacaaccaggaaaagaaattgctg
aaccaagaaaaaaagacatataggatcacagacaaatcatatattgaccgagattctgag
tatttattgcaacaaaatgaaccaaacctaggcttagaccaacaattattggaagattta
caaaagaaaaaaactgaccctcggtatatagagatgcagcgtttcagaaaaaagctgcct
tcatatggaatgcagaaggagctggtaaatttaatcaataaccatcaggtgacagtgata
agtggtgagactggttgtggcaaaaccactcaggttactcagttcatcttggataactac
atcgaaagaggaatagggtctgcctgcagaatagtgtgtactcagccaagaagaattagt
gccatttcagttgctgagagggtggctgcagaaagggcagagtcttgtggcaatggtaat
agtactggataccagattcgtctccaaagtcggttgccaaggaaacaaggctctatccta
tactgcacaacaggaatcattcttcagtggctccagtcagactcacgtttgtccagtgtt
agtcatattgtacttgatgaaattcatgaaaggaatctacagtcagatgttttaatgact
gttattaaagatctcctccattttcgatcggatctcaaagtaatattgatgagtgcaacc
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggg
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatttt
ccagaacaaaaagaacatagatcccagttcaaaaggggtttcatgcagggtcatgtaaat
agacaagaaaaagaagaaaaagaggcgatctataaagaacgctggccagcttatataaag
gaactacagacaagatactctgcaagtaccatagatgttttggaaatgatggatgatgat
aaagttgatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggac
ggtgcaatattggtctttctaccaggctgggacaatatcagtactttgcatgatctcttg
atgtcacaagtgatgtttaaatcagataggtttcttattatacctttacattcactgatg
cccactgtaaaccagacacaggtatttaaaaaaactcctcctggtgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtctatgtaatagat
ggagggaaaattaaagaaacacactttgacacacagaacaacatcagtaccatgtctgct
gagtgggttagtaaagctaatgccaaacagaggaaagggagagctggaagagttcagcct
ggtcattgttatcatctgtataatggtcttagagcaagtcttctagatgactaccaacta
ccagaaattttgagaactcctttggaagaactttgtttgcaaataaagatcttgaggctg
ggtggaattgcttattttctgagtaggttaatggatccaccatcagatgaggcagtagtg
ctctccataaaacatctaatggaactgagtgctttggataagcaagaagaattgacacct
cttggagtccatttagcccgactgcctgttgagccacatattggaaaaatgattctcttt
ggagctttgttctgttgcttagatccagtcctcaccattgctgccagtctcagctttaaa
gatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaggaactg
gcaaaggaaactagaagtgatcatctgacagttgtgaatgcgtttgagggctgggaagaa
gctaaacggcgtggtttcagatatgaaaaagactactgctgggaatattttctctcttca
aacacactacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaagtcccaaagatccaaaagctaatataaattcagataatgag
aagatcattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaatccgacta
aatttgggtaaaaaaaggaaaatggtgaaagttcacacaaagtctgatggtctggtttct
attcatcctaagtctgtcaatgtggagcagacagacttccactacaactggcttatctat
cacctgaagatgagaacaagcagtatatacttgtacgactgcacagaagtctcaccatac
tgcctcttgttctttggaggagatatttccatccagaaagataaggatcaggaaattatt
gctgtagacgaatggattgtgtttcagtctccagaaagaattgctcatcttgttaaggga
ctaagaaaggaactggatatccttctacaagagaagattgagtgccctcatcctgtagat
tggaacgacaccaaatccagagactgtgcagtactgtcagcgattctagacttgatcaaa
acacaagaaaaggctattccaaggaacttgccaccacgatcacaggatggatattacagc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (13)   
   Pfam (13)   
All databases (32)   

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