KEGG   Rattus norvegicus (rat): 310614
Entry
310614            CDS       T01003                                 
Symbol
Gatad2b
Name
(RefSeq) transcriptional repressor p66-beta
  KO
K23194  transcriptional repressor p66
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    310614 (Gatad2b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    310614 (Gatad2b)
   03036 Chromosome and associated proteins [BR:rno03036]
    310614 (Gatad2b)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    310614 (Gatad2b)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Chromatin remodeling factors
   NuRD complex
    310614 (Gatad2b)
SSDB
Motif
Pfam: P66_CC GATA LIM FAM76 DUF4004 DZR
Other DBs
NCBI-GeneID: 310614
NCBI-ProteinID: NP_001020059
RGD: 1308533
Ensembl: ENSRNOG00000015553
UniProt: Q4V8E1
Position
2:178046192..178127633
AA seq 593 aa
MDRMTEDALRLNLLKRSLDPADERDDVLAKRLKMEGHEAMERLKMLALLKRKDLANLEVP
HELPTKQDGSGVKSYEEKLNGNLRPHGDNRTAGRPGKENINDEPVDMSARRSEPDRGRLT
PSPDIIVLSDNEASSPRSSSRMEERLKAANLEMFKGKGIEERQQLIKQLRDELRLEEARL
VLLKKLRQSQLQKENVVQKTPVVQNAASIVQPSPAHVGQQGLSKLPSRPGAQGIEPQNLR
TLQGHSVIRSAANTTLPHMLMSQRVIAPNPAQLQGQRGPPKPGIVRTTTPNMNPAISYQP
QSSSSVPCQRTTSSAIYMNLASHIQPGTVNRVSSPLPSPSAMSDAANSQAAAKLALRKQL
EKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVIDSQGKNCASLLRVEPFVC
AQCRTDFTPHWKQEKNGKILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQ
QQAALSPTTAPAVSSVSKQETIMRHHTLRQAPQPQSSLQRGIPTSARSMLSNFAQAPQLS
VPGGLLGMPGVNIAYLNTGIGGHKAPSLADRQREYLLDMIPPRSISQSISGQK
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggatagaatgacagaagatgctcttcgtctgaatcttttgaagaggagtttggacccg
gcagatgagcgagatgatgtcctggcaaaacgactgaaaatggaggggcatgaggccatg
gaacggctgaaaatgttggcactgctcaaaaggaaagatttggcaaatcttgaggtaccg
catgagttacctaccaaacaagatggcagtggtgtcaagagttatgaagagaaacttaat
ggaaatctcaggcctcatggagacaacaggactgctggaaggccaggcaaagaaaacatc
aatgatgaacctgtggatatgagtgctcgacggagcgaaccagaccgaggaaggctaact
ccttccccagatataattgttttgtctgataatgaggcttccagtccccgatccagctcc
cggatggaagagagactcaaagcagccaacctagagatgtttaaggggaaaggcattgag
gaacggcagcagcttattaagcaactgagggatgagctaagattggaagaagctcgtctg
gtgctgttaaagaaactgagacagagtcagctacagaaagagaatgtggtccaaaagact
ccagttgtacagaatgcagcatctattgtccagccatctcctgcacatgtgggacaacaa
ggcttatctaaacttccctcccggcctggagctcaagggattgaacctcaaaatctgaga
acattacagggtcacagtgtcatccgttcagcagccaacaccacccttccacacatgttg
atgtctcaacgtgttattgcaccaaatccagcccaacttcagggccagcgggggccaccg
aaacctggcattgtacgcaccacaacacctaacatgaatcctgccatcagttaccaacca
cagtcaagttcttctgttccctgtcagcgcacaacgtcgtctgccatctatatgaacctc
gcctcccatattcagccagggactgtgaacagagtgtcctcaccacttcctagccccagt
gccatgagcgatgctgccaactcacaggctgcagccaaattggctcttcggaaacagctg
gaaaagacgctcctggagataccaccaccaaaacctcccgctcccttacttcacttcctg
cctagtgcagccaatagcgagtttatctacatggtaggcctggaagaagtcgtacagagt
gtcattgacagccaaggcaaaaactgtgcctcacttctgagggtcgaaccctttgtatgt
gcccagtgccgcacagatttcacccctcattggaagcaagaaaagaatggtaagatcctc
tgtgagcagtgtatgacttccaaccagaaaaaggctctaaaagctgaacacactaaccgg
ctgaaaaacgctttcgttaaagctctacagcaggaacaggaaattgagcagcggttacag
cagcaggcagcactgtccccaactacagctccagctgtgtccagtgtcagtaaacaggag
accatcatgagacatcatacacttcgacaggctccacagccccagagtagcctccagcgt
ggtatacccacatctgcccgctccatgctttcaaactttgcacaggcaccccagttgtct
gtgccaggtggcctccttggcatgccaggtgtcaacattgcatacttgaacactggcatc
ggaggacataaagccccaagcttggcagaccggcagcgtgaataccttctagacatgatc
cctcccaggtctatatctcagtccatcagtgggcagaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

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