KEGG   Rattus norvegicus (rat): 310630
Entry
310630            CDS       T01003                                 
Symbol
Sema4a
Name
(RefSeq) semaphorin-4A precursor
  KO
K06521  semaphorin 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    310630 (Sema4a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:rno04090]
    310630 (Sema4a)
CD molecules [BR:rno04090]
 Proteins
  310630 (Sema4a)
SSDB
Motif
Pfam: Sema PSI
Other DBs
NCBI-GeneID: 310630
NCBI-ProteinID: NP_001012078
RGD: 1304636
Ensembl: ENSRNOG00000019737
Vega: OTTRNOG00000002425
UniProt: A6J676 F7F3I7
Position
2:complement(176194248..176215752)
AA seq 762 aa
MTMALPSLGQDPWSLLSVFFFQLFLLLSLPPASGTGGQGPVPRVKYHAGDGHRALSFFQQ
KGLRDFDTLLLSGDGNTLYVGAREAILALNIENPGIPRLRNMIPWPASEKKKNECAFKKK
SNETQCFNFIRVLVSYNATHLYACGTFAFSPACTFIELQDSFLLPILKDKVTDGKGQSPF
DPAHKHTAVLVDGMLYSGTMNNFLGSEPILMRTLGSQPVLKTDIFLRWLHPDASFVAAIP
STQVVYFFFEETASEFDFFEELYTSRVAQVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQ
LPFNIIRHAVLLPADSPSVPRIYAVFTSQWQVGGTRSSAVCAFSLTDIERVFKGKYKELN
KETSRWTTYRGSEVNPRPGSCSMGPSSDKALTFMKDHFLMDEHVVGAPLLVKSGVEYTQL
AVETAQGLDGSSHVVLYLGTSTGSLHKAVVPQNSSAYLVEEIQLSPNSEPVQNLQLAPTQ
GAVFAGFSEGIWRVPRANCSVYKSCVDCVLARDPHCAWDPESRLCSLLSGSPLTWKQDME
RGNPEWACARGPMARSPRRQSSPQLIKEVLTVPNSILELPCPQLSALASYHWSHGKAKIP
EASSTVYNGSLLLLPQDGVGGLYQCVATENGYSYPVVSYWVDSQDQPLALDPELAGVPRE
RVQVPLTRVGGGASMAAQRSYWPHFLIVTVLLAIVLLGVLTLLLASPLGVLRARGKVQGC
GMLPPREKAPLSREQHLQPSKDHRTSASDVDADNNHLGAEVA
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgaccatggccctaccatccctgggccaagacccctggagtctcctgagtgtttttttc
ttccaactgttcctgctgctgtcactgccaccagcttccgggactggtgggcagggaccc
gtgcccagagtcaagtaccatgcgggagatgggcacagggccctcagcttctttcaacaa
aaaggcctccgggactttgacaccctgctcctgagtggagatggcaacactctgtatgtg
ggggctcgggaggccatcttggccctgaatatcgagaatccaggaatcccaaggctgagg
aacatgataccctggccagccagtgagaaaaaaaagaacgaatgtgcctttaagaagaaa
agcaatgagacacagtgtttcaacttcattcgtgtgctggtctcttacaatgccactcac
ctctatgcctgcgggacttttgccttcagccccgcctgcaccttcattgaactccaagat
tccttcctgttgcccatcttgaaggacaaggtcacagatgggaagggtcaaagccccttt
gaccctgctcacaagcacacagctgtcttggtcgatgggatgctttattctggcaccatg
aacaacttcctgggcagcgaacccatcctgatgcggacactgggatcccagcctgttctc
aagactgacatcttcctacgctggctgcacccggacgcctccttcgtggcagccatccca
tctacccaggtcgtctatttcttctttgaggagacagccagcgagtttgacttctttgag
gagctgtacacatccagggtggctcaagtctgcaagaacgacgtaggcggtgaaaagctg
ctgcagaagaagtggaccaccttcctgaaagcccagctgctctgcgctcagccagggcag
ctgccattcaacatcatccgccacgcggtcctgctgcccgccgattctccctctgttccc
cgcatctacgcagtctttacctcccagtggcaggttggtgggaccaggagctcagcagtc
tgtgccttctctctcacggacattgagcgagtctttaaaggaaagtacaaggagctgaac
aaagaaacctcccgctggaccacttacaggggctcagaggtcaacccgaggccaggcagc
tgctccatgggcccctcctctgacaaagccttgaccttcatgaaggaccattttctgatg
gatgagcatgtggtaggagctcccctgctggtgaagtctggcgtggagtacacacagctt
gccgtggaaacagctcagggccttgacgggagcagccatgtggtcctttacctgggtacc
tctacggggtccctgcacaaagctgtggtgcctcagaatagcagtgcttatcttgtggag
gagattcagctgagccctaactctgagcctgttcagaacctgcagctggcccccacccag
ggtgcagtgttcgcaggcttctctgaaggcatctggagggttcccagggccaactgcagt
gtctataagagctgtgtggactgtgtccttgccagggaccctcactgtgcctgggaccct
gaatcaagactgtgcagccttctgtctggctctcccctgacttggaagcaggacatggaa
cgcggcaacccggagtgggcatgcgcccgtggccccatggccaggagcccccggcgtcag
agctcccctcaactcattaaagaagtcctgacagtccccaactccatcctggagctgccc
tgcccccagctgtcagcactggcctcttaccactggagtcacggcaaagccaaaatccca
gaagcctcttctactgtctataatggctccctcttgttgctgccacaggatggcgttggg
ggcctctaccagtgcgtggccactgaaaacggctattcgtaccctgtagtctcctactgg
gtagacagccaggaccagcccctggcactggatcctgagctggcgggcgttccccgggag
cgagtgcaggtcccactgaccagggtcggaggcggggcttctatggctgcccagcggtcc
tactggccccattttctcatcgttactgtcctcctggccattgtgctcttgggagtgctc
actctcctccttgcttccccactgggagtgcttcgggctcggggtaaggttcagggctgt
gggatgctgccccccagggaaaaggccccactgagcagggaacagcacctccagccttcc
aaggaccacaggacctctgccagcgacgtagatgctgacaacaaccatctgggcgctgaa
gtggcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
   VEGA (1)   
Protein sequence (9)   
   UniProt (2)   
   RefSeq(pep) (7)   
DNA sequence (9)   
   RefSeq(nuc) (7)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (31)   

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