KEGG   Rattus norvegicus (rat): 310658
Entry
310658            CDS       T01003                                 
Symbol
Pogz
Name
(RefSeq) pogo transposable element with ZNF domain
  KO
K22594  pogo transposable element with ZNF domain
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    310658 (Pogz)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    310658 (Pogz)
SSDB
Motif
Pfam: DDE_1 HTH_Tnp_Tc5 zf-C2H2_4 HTH_28 HTH_23
Other DBs
NCBI-GeneID: 310658
NCBI-ProteinID: NP_001101163
RGD: 1309980
Ensembl: ENSRNOG00000053599
Position
2:185069492..185129741
AA seq 1357 aa
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTPAGNTLVQQGGQPLILTQNP
TPGLGTMVTQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIV
LNVQQGQTVRPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPA
TLTIRSTVPQSQSQQTKSTPSTSTTPIATQPTALGQLAGQPPGQPNQTSNPKLAPSFPSP
PAVSIASFVTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPVVVSNNSSAQRTSGPES
SMKVTSSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDAEPS
VPSAAKPASPEKTAPVTSTPSSTPIPALSPPTKVPEPSESAGDTVQTKLIMLVDDFYYGR
DGGKAAQLTSFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCY
RQFSTPFQLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQ
YRSSLYSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQQHYMRHQKRNVYHCNKCRLQF
LFAKDKIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPVSSNDAPSGALQEAA
PLTSADPLPVFLYPPVQRNVQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCR
YSTCCSRAYANHMINNHVPRKSPKYLALFKNFVSGIKLACTSCTFATSVGDAMAKHLVFN
PSHRSSNILPRGLSWMSYSRLGQTPERVLDRSMKNTYLPPPLLPNKAATVKPVGATSAEP
QELAGPVLQALPSPASTATPPATPTHPQPSALPPLATEGTECLNVNEQEEGSPVTQEPEP
ASGAGSGGSGVGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGE
NLEGKYLSFEAEEKLAEWVLIQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFM
LRHHLTPHARRAVAHTLPKHVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDTEV
LSSDDRKENALQTVGTGEPWCDVVLAILADGTVLPTLVFFRGQANRLANVPDSILLEAKD
SGYSDDEIMELWSTRVWKKHTACQHSKSMLVMDCHRTHLSEEVLALLSASSTLPAVVPAG
CSSKIQPLDVCIKRTVKNFLHKKWKEQAREMADAACDSDVLLQLVLVWLGEVLSVIGDSP
DLVQRSFLVASVLPGPDGNVNSPTRNADMQEELIASLEEQLKLNGEQSEEHSASAPRPRS
SPEETVEPESLHQLFEGESETESFYGFEEADLDLMEI
NT seq 4074 nt   +upstreamnt  +downstreamnt
atggcggacaccgacctttttatggaatgtgaggaggaagaactggagccatggcagaaa
atcagtgatgtcattgaggactctgtagttgaagattacaattcagtggataaaactact
cccgctggtaatactttggtccagcaaggtggacaaccactcatcttgacccaaaatcca
acaccgggtctgggaacaatggttactcaaccagtattgagacctgtccaggtcatgcag
aatgccaatcatgtgactagctcccctgtggcctcacaacctatcttcatcactacccag
ggattccctgtaaggaatgttcgccctgtacagaatgccatgaaccaggttgggatcgtg
ctgaatgtacagcaaggccaaacagtcagaccaattacactggtcccagccccaggtaca
cagtttgttaagccgacagttggcgtcccacaagtgttctctcagatgacccccgtgagg
ccaggctccacaatgcctgtgaggcccaccaccaacacctttaccaccgtcatcccagct
actctcaccatccgaagcactgtcccacagtcccagtcccagcagaccaagtccaccccc
agtacctccactactcccattgccacacagccaaccgcattggggcagctagctggtcag
cctccaggccagcccaaccagacctcgaatcccaaactagctccctccttcccctctcca
cctgcagtgagcattgccagctttgtcactgtgaagcgacctggggttacaggtgaaaat
agcaacgaagtggccaagttggtgaatactcttaacactatcccttccctgggccagagt
cctgggccagtggtggtgtccaacaacagttctgctcaaagaaccagtggacccgaatct
tcaatgaaagtgacctcttccatcccagtgtttgacctccaggacggtggacggaaaata
tgtccacggtgtaatgctcagttccgagttactgaagctttgagaggtcacatgtgttac
tgctgccctgaaatggttgagtaccaaaagaaaggcaagtccctcgatgcggagcccagt
gtcccatcagcagcaaagcctgcatcccctgagaagacagccccagttacttccacaccc
tcctctacaccaattcctgctctctcacctcctaccaaagtgccagagccaagtgagagt
gcgggagacactgtccagaccaagcttattatgcttgtcgatgacttttactacggacgg
gatgggggcaaagcagcccagctaactagcttccctaaagttgccacgtctttccgatgc
cctcattgtactaagaggctaaagaacaacattcgattcatgaaccacatgaagcaccac
gtagaacttgatcagcagaatggcgaggtggatggtcatactatctgccaacactgttac
cgccagttctccacccctttccagctccagtgccacttggaaaatgttcatagtccctat
gaatcaactaccaagtgcaagatctgtgagtgggcctttgaaagcgagcccttgtttctc
cagcatatgaaagacacccacaagcctggagagatgccttatgtttgtcaggtgtgtcaa
tatcgctcctccctctactcagaggtagacgtccattttcggatgatccatgaagacact
cggcatttgctctgcccgtattgcctaaaagtcttcaaaaacggcaatgccttccagcag
cactacatgaggcaccagaagagaaatgtttatcactgcaacaaatgccggctgcagttt
ctctttgccaaggacaaaattgaacacaagcttcagcaccataaaaccttccgtaagcct
aagcaactggaaggcttgaaaccaggcaccaaggtgacaatccgggcttccagggggcag
ccacgaactgttcctgtgtcttcaaatgatgcaccttctggcgctttgcaggaggcagca
ccactgacctccgctgaccccctacctgtcttcctttaccctcccgtccaacgcaatgtc
cagaagagagctgtcaggaaaatgagcgtcatgggccggcagacgtgtctggagtgcagc
tttgagattccagatttccctaaccatttccctacctacgtgcactgttctctctgtcgc
tatagcacctgctgctctcgagcttatgccaatcacatgatcaacaatcatgttccacgg
aagagtcccaagtatctggctttgtttaaaaattttgtaagtggaatcaagctggcctgt
acttcgtgtacctttgctacctccgtgggagatgccatggccaagcatttggtgttcaac
ccctcccacagatctagcaacatcttaccacgggggctcagttggatgtcttactcgagg
cttggccagactcctgaacgagtgttggaccggagcatgaagaatacgtatcttccacct
cctctcctccctaacaaagctgccactgtgaagcctgtaggagccacctcagcagagcct
caggagctggcaggtcctgtgctccaggcacttccatcaccagcctcaactgcaacccca
ccagcaacccccactcacccacagccctctgccctgccacccttggccacagaggggact
gagtgtctgaatgtcaatgaacaggaggagggaagccctgtcacccaggagcctgaacca
gcatcaggtgctggaagtggtggcagtggggttggcaaaaaagagcagctgtctgtgaag
aagcttcgggtagtgctgtttgccctgtgctgcaacacagagcaggcggctgaacacttc
cgaaacccccagcggcgaattcgccgttggcttcgacgctttcaggcctctcagggagag
aatttagagggcaaatatctcagctttgaggcagaagaaaaactggctgaatgggtgctg
atccagagagagcagcagctccctgtaaatgaagagaccttgtttcagaaggccaccaaa
atcggacgctctttggaagggggatttaagatctcctatgagtgggctgtgcgctttatg
ctccggcaccacctcactccccatgcccggcgagctgtagcccacacgttaccgaagcat
gtagcagaaaatgctggactcttcattgagtttgtgcagcggcagattcacaaccaagac
ttacctttgtctatgattgtggctatcgatgagatctctttgtttctggacacagaggtg
ctgagcagtgatgaccggaaggagaacgctctgcagacagtgggcacaggggagccttgg
tgtgacgtcgtgctggctatcctagcagatggcactgtcctccccaccctggttttcttc
cgaggtcaagcgaatcggcttgctaatgtgccagactctatattactagaggctaaagac
agtggctatagtgatgatgaaatcatggagctttggtccacccgtgtgtggaagaagcac
acagcttgtcagcacagcaaaagcatgctggtgatggactgtcatcgcactcacttgtca
gaagaggtgctggccctgctcagtgcctctagcactttgcctgcggtggttcccgcaggc
tgtagctctaaaatccagccactagacgtgtgcatcaaacgaactgttaagaacttcctg
cacaaaaagtggaaggagcaggctcgggaaatggcagatgctgcttgtgattctgatgtc
ttgcttcagctggtgttggtctggctgggtgaggtgctgagtgtcattggggactcccca
gacctagttcagcggtccttccttgtggctagtgttctgccaggccctgatggcaacgtt
aactcacccacacgcaacgctgatatgcaggaggagctcattgcctccctcgaggagcag
ctaaagctaaatggagaacagtccgaggagcactcagcttctgccccccgacccaggtca
tcgcctgaagagacagttgagcctgaaagccttcatcagctttttgagggagaaagtgag
acagagtctttctatggctttgaggaagctgacctagatctgatggagatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (10)   
   RefSeq(nuc) (8)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (59)   

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