KEGG   Rattus norvegicus (rat): 310683
Entry
310683            CDS       T01003                                 
Symbol
Itga10
Name
(RefSeq) integrin alpha-10 precursor
  KO
K06586  integrin alpha 10
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno04810  Regulation of actin cytoskeleton
rno05165  Human papillomavirus infection
rno05410  Hypertrophic cardiomyopathy
rno05412  Arrhythmogenic right ventricular cardiomyopathy
rno05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    310683 (Itga10)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    310683 (Itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    310683 (Itga10)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    310683 (Itga10)
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    310683 (Itga10)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    310683 (Itga10)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    310683 (Itga10)
   05414 Dilated cardiomyopathy
    310683 (Itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:rno04515]
    310683 (Itga10)
Cell adhesion molecules [BR:rno04515]
 Integrins
  Integrin alpha subunits
   310683 (Itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 VWA_2 Integrin_A_Ig_3 FG-GAP_2 FG-GAP_3 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 310683
NCBI-ProteinID: NP_001101169
RGD: 1305152
Ensembl: ENSRNOG00000021217
Position
2:186871711..186891012
AA seq 1167 aa
MELPSIPHLFLPLALLTGLCSPFNLDEHHPRLFTGPPEAEFGYSVLQHVGGGQRWMLVGA
PWDGPSGDRKGDVYRCSIGGFHSAPCTKGHLGDYQLGNSSQPAVNMHLGMSLLETDADGG
FMACAPLWSRACGSSVFSSGICAHVDASFRLQGSLAPTAQRCPTYMDVVIVLDGSNSIYP
WSEVQTFLRRLVGRLFIDPEQIQVGLVQYGENPVHEWSLGDFRTKEEVVRAARNLSRREG
RETRTAQAIMVACTEGFSESRGGRPEAARLLVVVTDGESHDGEELPAALKACEAGRVTRY
GIAVLGHYLRRQRDPSSFLREIRAIASDPDERFFFNVTDEAALTDIVDALGDRIFGLEGS
RGENESSFGLEMSEIGFSIHRLQDGILFGMVGAYDWGGSVLWLEEGRRLFPPRTALEDEF
PPALQNHAAYLGYSVSSMLLPGGRRLFLSGAPRFRHRGKVIAFQLKKDGVVKVTQSLQGD
QIGSYFGSELCPLDTDMDGITNILLVAAPMFLGPQNKETGRIYVYVVGQQNLLMLQGTLQ
PDRSQDSRFGFAMAALPDLNHDGFSDVAVGAPLEDGHQGALYLYHGTQTGIRPHPTQRIA
AGSMPQALRYFGRSVDGRLDLDGDDLVDVAVGAHGAAILFSSQPIIHLIPTLDVMPPHIS
VVQKDCKRRGQEAACLTASLCFQVKSQTPGRWDRRFHIRFSASLDEWTAGARAAFDGSGQ
RLSPGQLRLSVGNVTCEQLHFHALDTSDYLRPVALTVTFALDNTTKPGPVLAEGSSTSIR
KLIPFSKDCGPDNECITDLVLQADMDIRGSRKSPFVVQGGRQKVLVSVTLENKKENAYNT
SLSLSFSRNLHLASLTPQRAKSVKVECAVPSPHARLCIVGHPVFQAGAKVSFLLEFEFSC
TFLLSQVSVRLTASSSSLERNETLQDNTAQTSAYIRYEPHLMFSSESTLHRYEVHPYRAL
PVGPGPEFKTTLRVQNLGCHVVSGLVVSALLPAVAHGGNYFLSLSQVISGNASCTVQNLT
DPPGFPVHPEELQHTSRLNGSNTRCQAVRCHLGLLPKGTEISVGLLRLVHNEFFRRAKFK
SVTVVSTFKLGTEKGSVLLLNEASQWRESHLEVIQTLPTLISLWILVGSVLGGLLLLALL
VFCLWKLGFFTRKKIPKEEQSEGKLEQ
NT seq 3504 nt   +upstreamnt  +downstreamnt
atggagcttccctccatccctcacctgttcttgccccttgcgttgctgacaggtctctgc
tccccctttaatttggatgagcatcacccacgcctattcacagggccaccagaggctgaa
tttggatacagtgtcttacagcatgttgggggtggacagcgatggatgctggtgggcgcc
ccctgggatgggccttcaggtgaccgaaagggggatgtttatcgttgctctataggggga
ttccacagtgctccatgtaccaaaggccacctgggtgactatcaactgggaaattcctct
cagcctgctgtgaatatgcacctcgggatgtctctcctggagacagatgctgatggggga
ttcatggcctgtgcccctctctggtctcgtgcctgcggcagctctgtcttcagttctgga
atatgtgcccatgtggatgcttcattccgacttcaggggagcctggcaccgaccgcccaa
cgttgtcctacatacatggatgtcgtcattgttttggatggctccaatagtatctatccc
tggtcagaagttcagactttccttcggaggctggtaggaagactgtttatcgatccagag
cagatacaggtaggactggtacagtacggggagaaccctgtgcacgagtggtccctggga
gatttccggacaaaggaagaagttgtgagagcagcgaggaacctcagtcggagggagggg
cgagaaacgagaacggcccaagcaataatggtggcatgcacagaagggttcagtgagtcc
cggggcggcagaccagaggccgctaggctgctggtagttgtcactgatggggagtctcac
gacggagaggagcttccagcagcgctaaaggcctgtgaggctggaagagtaacacgttac
gggattgcggtccttggtcactatctccggcgacagagagaccccagctcttttcttcgg
gaaatcagagccattgctagtgatccagatgagcgattcttcttcaatgtcacggatgag
gccgcgctgacggacatcgtggatgcgctgggagaccggatttttggccttgaaggatcc
cgtggagaaaatgaaagctcctttgggctagaaatgtccgagattggcttctccatccac
cggctacaggatgggattctctttgggatggtgggggcttatgactgggggggctccgtg
ctatggcttgaagaaggtcgccgccttttcccgccacgaactgccctggaagatgagttt
ccccctgcattgcagaaccacgcagcctacctgggttactctgtttcttccatgcttctg
ccgggaggacgccggctctttctctcaggggcaccgaggtttagacatcgaggaaaagtt
atcgccttccagctaaagaaagatggggttgtgaaggtcacccagagcctccagggggat
cagatcggctcatactttggcagtgagctctgcccgttggacacagatatggacggaata
actaatatcttacttgtggcggctcccatgttcctgggtccccagaacaaggagactgga
cgcatttatgtgtacgtggtgggccagcaaaatttgctgatgctccagggaacccttcag
ccagaccgctcccaggattctcggtttggctttgctatggctgctcttcctgatctgaac
cacgacggtttcagtgatgtagcagtgggggcacctctggaggatggccaccagggagca
ctgtacctgtatcacggaacccaaactggaatcaggccacatcctacccagaggattgct
gctggctccatgccacaggccctccgatattttggccgaagtgtggatggccgcctagat
ctggatggagatgatcttgtggatgttgctgtgggtgcccatggggcagccattcttttc
agctcccagcctatcatccacctgattccaaccctggatgtgatgcctccgcatatcagc
gtggttcagaaggactgtaagcgacgaggccaggaagcagcctgtttgacggcatccctt
tgcttccaagtaaagtctcaaactcctgggcgttgggatcgcagattccacatacggttc
tcagcatcactggatgagtggacagctggggcacgtgcagcattcgatggctctggccag
cggctgtccccagggcagctccggctcagtgttgggaatgtcacttgtgaacagctgcac
ttccatgcactggatacatcggattacctccggccagtggccttgactgtgacttttgct
ttggacaacaccacgaagccagggcctgtgctggctgagggatcctctacgtctatacgg
aagctgatccccttctcaaaggactgtggccctgacaatgagtgtatcacagacctggtg
cttcaagctgacatggacatcagaggctccaggaagtccccatttgtggttcaaggtggc
cgacagaaagtgctggtgtcggtgaccctggagaacaagaaggagaatgcctacaacact
agtctgagtctcagtttttctagaaacctccacctggccagtcttactcctcagagggcc
aaatcagtgaaggtggagtgtgcagtcccttccccccacgcccggctctgcatcgtgggg
catccggtcttccaggctggggccaaggtgtccttcttgttagagtttgaatttagctgc
accttcctcctgagccaggtctctgtgaggctgactgccagtagcagtagcctggagagg
aacgagacccttcaagataatacagctcagacctctgcctacatccgatacgaacctcac
ctcatgttctctagtgagtccactctgcatcggtatgaggttcatccttacagggctctc
ccagtgggccccggccctgaattcaaaaccactcttagggttcagaaccttggttgccat
gtggtcagtggtctcgttgtctcagccctccttccagctgtagcccatgggggtaactac
ttcctgtcactatctcaagtcatctctggcaatgcaagctgcacagtgcagaacctgact
gatcccccaggattccctgtgcatccagaggagcttcagcacacaagcagactgaatggc
agtaacactcggtgtcaggcggtgaggtgccatcttggactgctgcctaaggggactgag
atctctgttggactgctgaggctggttcacaatgaattcttccggagggccaagtttaag
tctgtgacagtggtcagcaccttcaagttaggaactgagaagggcagtgtcctcctactg
aacgaagcctcccagtggcgtgagagccacttggaggtgattcagaccctccctaccctc
atctccctgtggatcctggttggcagcgtcctgggagggctgctcctgcttgctctcctt
gtcttctgcctgtggaagcttggcttctttacccgcaagaaaatccccaaagaagaacaa
agtgaagggaagttggagcagtga

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