KEGG   Rattus norvegicus (rat): 310720
Entry
310720            CDS       T01003                                 
Symbol
Wdr3
Name
(RefSeq) WD repeat-containing protein 3
  KO
K14556  U3 small nucleolar RNA-associated protein 12
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    310720 (Wdr3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rno03009]
    310720 (Wdr3)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    310720 (Wdr3)
SSDB
Motif
Pfam: WD40 Utp12 ANAPC4_WD40 NBCH_WD40 WDR54 WD40_like Utp21
Other DBs
NCBI-GeneID: 310720
NCBI-ProteinID: NP_001101175
RGD: 1307480
Ensembl: ENSRNOG00000019670
UniProt: A6K3F8
Position
2:complement(190194474..190217087)
AA seq 942 aa
MGLTKQYLRYVASAVFGLIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKILI
LQGLKQEVTCLCPSPDGLHLAVGYEDGAIRVFSLLSGEGNITFNGHRAAVTSLKYDQLGG
RLASGSKDTDVIIWDVINESGLYRLKGHKDAVTQALFLRERNLLVTSGKDTMVKWWDLDN
QHCFKTMVGHRTEVWGLVLVSEETRLITGAADSELRAWDIAYLQEIDDPEEPEPKKIKEC
PGIQDTPEAEDRTLEADDEKSEDRILSCRKAGSLMREGRDRVVNLAVDKTGRILACHGTD
SVLEVFCILSKAEVQKKMDKKLKKARKKARLNSANEEEDPETSVSMTLQDEILRVTKIKT
SAKIKSFDLIHSPQGELKAVFLLQNNLVELYSLSTSLPNPQPVRTSRITIGGHRSDVRTL
SFSSDNIAVLSAAAESVKIWNRSTLQCIRTMPCEYALCSFFVPGDRQVVIGTKTGNMQLY
DLASGNLLETIAAHDGALWSMSLSPDQRGFVTGGADKAVKFWDFELVTDKNSTQKRLSVK
QTRILQLDEDVLYVCYSPDQRLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVICMDISH
DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMHLRFVPKSHLFFTAGKDHKIKQWD
ADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSASHDKSLRLWERTREPLILEEERELQREA
EYEESVAKEEQPAVPGETQGDNYFTGKKTIETVKAAERIMEAIELYREETAKMKEHRAIC
RAAGKEVPLPVNPILMAHGNISPSAYVLETFKGIRSSELEEALLVLPFSYVPDILTLFNG
FIQTGSDVELLCRCLFFLLRIHFGQITSNQMLVPVIEKLKETTISKVRQVQDVIGFNMAG
LNYLKRECEAKSEVMFFAEATSHLEEKKRKRKNRRKMILTLT
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggggcttaccaaacagtatctccgctatgtggctagtgctgtctttggcttgattggc
agccaaaaaggcaacattgttttcgtgacactccgaggtgaaaaaggacgctacgtggca
gtacctgcctgtgaacacgtttttatctgggacctaaggaaaggcgagaagatccttatc
cttcaggggcttaaacaagaagtcacttgcttgtgtccctccccggatgggctgcatcta
gctgttggctatgaggatggagccatccgagtcttcagcctcctcagtggtgagggaaac
ataaccttcaatggacacagagcagccgtcaccagcttaaagtacgatcagctaggaggc
agactggcttccgggtctaaggatacggatgtcattatttgggatgtgatcaatgaaagt
ggcctctaccgtctaaagggacacaaggatgccgtcacacaagctctgtttctccgagaa
aggaatctgctagttacaagtgggaaagacactatggtgaagtggtgggacctggataac
cagcactgcttcaaaacaatggttggccaccgaactgaggtgtggggcttggttctggtt
tcagaagaaactcgactaatcactggggctgcagacagtgagctgagagcctgggacatc
gcctatctacaggagattgatgacccagaagaaccagagcccaagaaaatcaaagagtgt
ccagggatacaggacacgcctgaagcagaggaccgcacccttgaggcggatgatgagaag
tctgaagaccgcatactctcatgtagaaaagctggctccttaatgcgagaaggaagagac
agagttgtgaaccttgccgtggacaagacaggccggatccttgcttgccacggaactgat
tctgtgttagaagtattttgtattctttccaaagcagaagttcagaagaaaatggataaa
aagctaaagaaagctagaaagaaagcaagattgaactctgccaatgaggaggaggaccct
gaaacaagtgtctcaatgactctgcaggatgagatccttcgggtaaccaagatcaagact
tctgccaagatcaaatcttttgacctgattcattcgcctcaaggagagttaaaggcagtc
ttcctgctgcagaacaatctggtagaactgtattcgctcagtacatccttgccaaacccc
cagcctgtgaggacgagcaggatcaccatcggaggccaccgcagcgatgtgcgcacgctg
tctttcagctcggataacatagctgtgctttcagccgcagccgagtccgttaagatatgg
aacaggtctaccctgcagtgcatccgcaccatgccttgtgaatatgctctctgctccttc
tttgttcctggtgacaggcaggtggtcatcgggacaaagacaggaaatatgcaactttat
gacctggcctcgggcaatctcttggagacaatagctgcccatgatggagctctgtggtcc
atgtctctttctccagatcagcgtggctttgtgacaggtggtgctgataaagctgtcaag
ttctgggattttgagttggtgacagataaaaatagtacccagaagagactctctgtgaaa
caaactagaatcttgcagctagatgaggatgtcctatatgtctgctactctcctgatcaa
aggctgctggctgtatctttgctggactgcactgtgaagattttctatgttgacacttta
aagttttttctctcactgtatggacacaagctgcctgttatatgcatggacatctcccat
gatggagcactaatagcaactggttctgctgatagaaatgtgaaaatctggggtctggac
tttggggactgccacaggtctctctttgcacatgatgacagtgtgatgcatctccgattc
gtgcccaagtcccaccttttcttcaccgcggggaaggaccacaagatcaagcagtgggat
gcggacaagtttgagcacatccaaacgctggaggggcatcaccaggaaatatggtgtttg
gctgtcagccctagtggagactacgtggtgtcagcctctcatgacaagtctctgagactc
tgggagagaacgagagagcctcttattcttgaggaagaaagggaactgcaaagggaagca
gagtatgaggagagtgtggccaaagaagagcagccagcagttccaggggagacccagggt
gacaactacttcactgggaagaagacaattgaaacagtcaaagcggctgagaggatcatg
gaggcaattgagctgtaccgagaagaaactgcaaaaatgaaagaacacagagccatttgt
agagcagcggggaaagaggttcctcttcctgtcaaccccatcctgatggcccatggcaat
atttctccctcagcgtatgtgttagagacttttaaagggatcaggtcaagtgaactggaa
gaggccctgcttgtgctgccgttctcctatgtcccagacattcttacgctgttcaatggg
ttcatccagacaggatcagatgtcgagctgttgtgccggtgcctcttttttctcctcagg
attcactttggccagatcaccagcaaccagatgcttgtgcccgtgatagagaagctaaaa
gaaacaactatttcaaaagtcagacaagtccaggatgtcattggcttcaatatggctggt
ctcaattatcttaagagagaatgcgaagcaaagagtgaagttatgttttttgcagaagct
actagtcacttggaagagaagaagagaaaacgaaaaaatagaagaaagatgattttaaca
ctgacttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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