KEGG   Rattus norvegicus (rat): 310775
Entry
310775            CDS       T01003                                 
Symbol
Lrif1
Name
(RefSeq) ligand-dependent nuclear receptor-interacting factor 1
  KO
K23220  ligand-dependent nuclear receptor-interacting factor 1
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rno03036]
    310775 (Lrif1)
Chromosome and associated proteins [BR:rno03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    310775 (Lrif1)
SSDB
Motif
Pfam: LRIF1
Other DBs
NCBI-GeneID: 310775
NCBI-ProteinID: NP_001120957
RGD: 1306520
Ensembl: ENSRNOG00000017784
UniProt: F1LMD4
Position
2:196919606..197010713
AA seq 749 aa
MSNRLQTVFLKTAEEKSGSHCISGCMYQVVPTIGTDGKKLLQLLPIPKSSGNLIPVVQSP
VMSHGLKGNTEKPVQVTFQTQISSSSTSASVQLPVLQPANTTKYFLTGTIDTSGKDRVTS
MGTGNFTPPISNTQNHGVKIHRLTRQTFTIPPSTQNDSSYFIVNTPSLPANVNSSTLPSG
PPLTIPAHAEVKPVLASPLPPLVQQKILGTVTTSTSGTVEASQIPAVFYVSPVNSVKIIV
DKKTQNIYHKPVTFSTSQIPPNVATKTQLNSGQHPQAAPVNLIFQEYLQPGIPCLVPVKS
SNNVPSKVFNTFVDRKTLGDNTVGTPLLSTNSSSRTQSISVPIKDDGLIMFNGKVLLNKK
GTYGLPSKIDQQNSVSSDIPLKDSSQVVSSSLVTEISREVLSSVLVKSKSFQLKTKSLSN
SQPAPMAHIKPEKSEKVERPSFSVTSPHTTNQSTHCLKQSKIVFINPVFSDGFRTGQNTP
RKENLIQNIRSSVDAATVTSQQCVFRDQEPQTQYEMASILKKDIQERSNKKYSQGNHTKA
SYLKNDAEFKKIFGLTKDLRVCLTRIPDHLSSTKSFDSFNNLMKSSSYKDANVVMKEEKK
QSFSKKRNAKPMKKMDYTKRRKIENASDMVMNVMNGTDVANSQLLSSILPISDIAQHNII
TSHSTTREDKRTETEHCCHEKQEKGTLSSSTSFEQSNYFNKNYTEDIFPVTPPELEETIR
DEKIRRLKQILREKEAALEELRKKMHQKQ
NT seq 2250 nt   +upstreamnt  +downstreamnt
atgtctaatagactccagaccgtctttctgaaaaccgcagaagaaaagtcaggctcgcac
tgtatttcagggtgcatgtatcaagtagttcctacgattggcaccgatggaaaaaaactt
ctgcaattacttccaattcctaaatcttctggaaatcttatcccagtagttcaatctcca
gtcatgtctcatggtttgaaagggaatacagaaaaaccagttcaagttacttttcaaact
cagatttccagctcttccacaagtgcatcagttcaattgcctgttttgcagccagccaat
actacaaaatattttcttacaggaacaatagatacatcaggaaaagatagagttacttct
atggggactggaaattttacaccaccaatttctaacactcagaatcatggtgtgaaaatt
catagactcaccaggcaaacatttactattcctccctcaacacaaaatgactcatcttat
tttatagtcaataccccaagtctcccagcaaatgtgaattcttcaactttgccttctggg
cctcctttaacgattccagcccatgctgaagtgaaacctgtgcttgcatcacccttgcct
cctttggttcagcaaaagatacttggaactgtaaccacaagtacctcaggaacagttgag
gcctcgcagataccagcagttttttatgtatctcctgtaaactcagtaaaaattattgtt
gacaagaaaactcagaatatttaccacaaaccagtgacattcagtacctcgcaaattcca
ccaaatgttgctacaaaaacacagttaaacagtggtcagcatcctcaagctgctccagtg
aacttgatttttcaagagtatctacagcctggaattccatgtcttgttcctgttaagtct
tcaaataatgtgccttcaaaagttttcaatacttttgtagataggaaaactctgggagat
aatacagtaggtacacctttgttgagtaccaacagttctagcaggacacagtccataagt
gtgcctattaaagatgatggtttgataatgtttaatgggaaagtcttgttgaataaaaag
gggacatatggtctgccatcaaaaattgaccagcagaattctgtttcttctgatattcca
ctaaaagattcatcacaggtagtaagttcaagtctggtcacagaaatatccagagaggtt
ttaagtagtgttttggttaaaagtaaatcttttcagttgaagacaaaatcactttccaat
tcccagcctgctcccatggcccatataaaaccagagaagagtgaaaaagtggagagacca
tctttttctgtcacaagtccacatactacgaaccagtccactcactgccttaaacagagt
aaaattgtatttataaacccagttttttcagatggatttaggacaggacagaataccccc
agaaaagaaaatctcatccagaacatacgttcctctgttgatgcagcaactgttacttct
caacagtgtgttttcagagaccaagaaccacagacccagtatgagatggcatcaatatta
aaaaaagatattcaagaaagaagtaacaagaaatattctcaaggaaaccataccaaggca
tcatatctgaagaatgatgctgaatttaaaaagatatttggtctcactaaagatttgaga
gtgtgtcttactcgaattcctgaccatctgagctctacaaaaagttttgattcctttaac
aatttgatgaaaagtagttcttacaaagatgcaaacgttgtgatgaaggaagaaaaaaaa
cagagtttctctaagaaaagaaatgcaaaacccatgaagaaaatggattacacaaaaagg
agaaaaattgaaaatgctagtgacatggtcatgaacgtcatgaatggaactgatgttgct
aattcccaactccttagtagtattttaccaatatcagacatagcacaacataacattatc
acaagccatagtacaaccagggaagacaagagaactgaaacagaacactgctgtcatgag
aagcaggaaaaaggcacattaagttcaagcacatcttttgaacaaagtaattattttaat
aaaaactatactgaagatatatttccagtgacaccaccagaactagaagaaaccatcaga
gatgaaaaaataagaagacttaagcaaattctaagagaaaaagaagcagctcttgaagaa
ttgcgtaagaagatgcaccaaaaacaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (23)   

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