KEGG   Rattus norvegicus (rat): 310836
Entry
310836            CDS       T01003                                 
Symbol
Abca4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
  KO
K05644  ATP-binding cassette, subfamily A (ABC1), member 4
Organism
rno  Rattus norvegicus (rat)
Pathway
rno02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    310836 (Abca4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    310836 (Abca4)
Transporters [BR:rno02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    310836 (Abca4)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 AAA_23 AAA_22 SRP54 AAA_29
Other DBs
NCBI-GeneID: 310836
NCBI-ProteinID: NP_001101191
RGD: 1309445
Ensembl: ENSRNOG00000012892
UniProt: A6HVF7
Position
2:212849470..212986730
AA seq 2290 aa
MGFLRQIQLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNANPLYSQHECHFPNKA
MPSAGMLPWLQGIFCNMNNPCFQNPTPGESPGTVSNYNNSILARLYRDFQELFMDTPEVQ
RLGRVWTELRTLSQLMDTLRTHPERFTGRGLPIRDILKDEETLTLFLKKNIGLSDSVAYL
LVNSQVRMEQFAYGVPDLELKDIACSEALLQRFIIFSQRWGAQAVRGALCPLSQVTLQWI
EDTLYADVDFFKLFRVLPTLLDSSSQGINLRFWGEILSDLSPRVQKFIHRPSVQDLLWVT
RPLLQNSGPETFTQLMGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRRDPTY
SYDKRTTWRATKPLLMGKILFTPDSPAARRLLKNANSTFEELDRVRKLVKAWEEVGPQIW
YFFEKSTQMAVIRDTLQHPTVKDFINRQLGEEGITTEAILNFFPNGPRENQADDMTSFDW
RDIFNITDRFLRLANQYLECLVLDKFESYDDEVQLTQRALSLLEENRFWAGVVFPDMYPW
TSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVEDFRYIWGGFAYLQDMVEQGI
VRSQTPAEPPIGVYLQQMPYPCFVDDSFMIILNRCFPIFMVLAWIYSVSMTVKGIVLEKE
LRLKETLKNQGVSNAVIWCTWFLDSFSIMSMSIFLLTLFIMHGRILHYSDPFILFLFLLA
FATATIMQCFLFSTFFSKASLAAACSGVIYFTLYLPHILCFAWQDRMTADLKTTVSLLSP
VAFGFGTEYLVRFEEQGLGLQWSNIGKSPLEGDEFSFLLSMKMMLLDAALYGLLAWYLDQ
VFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPLTEEIEDPEYPEDSFFEREL
PGLVPGVCVKNLVKVFEPGSRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP
TSGTVLIGGKDIEISLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEARLEM
EAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWD
LLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCFGTGFYLTLVRK
MKNIQSQRCGCEGACSCTSKGFSARCPARVDEITEEQVLDGDVKELTDLVYHHVPEAKLV
ECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDSES
GSKFVGGTQQKREHTGLRHPCSAPVEKHRQHAQASHTCSPGQVDPPKGQPSPEPEDPGIP
FNTGARLILQHVQALLVKRFHHAVRSRKDFVAQIVLPATFVFLALMLSIIVPPFGEFPAL
TLHPWMYGHQFTFFSMDEPNNEHLEVLADVLLNRPGFGNRCLKEEWLPEYPCGNATSWKT
PSVSPNITHLFQKQKWTAAHPSPACKCSTREKLIMLPECPEGAGGLPPPQRIQRSTEVLQ
DLTNRNISDYLVKTYPALIRSSLKSKFWVNEQRYGGISIGGKLPDIPISGEALVGFLSDL
GQMMNVSGGPVTRESSREMLDFLKHLETKDNIKVWFNNKGWHALVSFLNVAHNAILRASL
PKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSIDAVVAICVIFAMSFVPASFVLYLIQ
ERVTKAKHLQFISGVSPTTYWMTNFLWDIMNYAVSAGLVVGIFIGFQKKAYTSTDNLPAL
VTLLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRMLL
RFSATLRELLIVFPHFCLGRGLIDLALSQAVTDIYAQFGEEYSANPFQWDLIGKNLVAMA
IEGVVYFLLTLLIQHHFFLTRWIAEPAREPVFDEDDDVAEERQRVMSGGSKSDILKLNEL
TKVYSGSSSPAVDRLCVGVHPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATIAGKSI
LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPSKEIEKVANWGIQSLGLSLY
ADRLAGTYSGGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVNIIRQGRAV
VLTSHSMEECEALCTRLAIMVKGTFQCMGTIQHLKYKFGDGYIVTMKIKSPKDDLLPDLN
PVEQFFQGNFPGSVQRERHHSMLQFQVPSSSLARIFQLLISHKDSLLIEEYSVTQTTLDQ
VFVNFAKQQTETYDLPLHPRAAGASWQAKLEGKSGRLETQEPLPAGSSEHLANINNPTAV
ADNKHTRSPQ
NT seq 6873 nt   +upstreamnt  +downstreamnt
atgggcttcctcagacagatacagcttttgctttggaagaactggactctgaggaaaagg
caaaagattcgctttgtagtggaactcgtgtggcctttgtctttgtttttggtgttaatc
tggctgaggaatgccaaccccctctacagtcaacatgaatgccactttcccaacaaggcg
atgccttcagcaggaatgttaccatggctccaggggattttctgcaatatgaacaaccct
tgttttcaaaaccccacccctggagaatctcccggaactgtatcaaactataataattcc
atcttggcaagactatatcgagattttcaagagctcttcatggacacaccggaggtccag
cgtcttggccgggtttggacagagctccgcaccttatctcagctcatggacaccctgcgg
actcaccctgagagatttacaggaagaggattaccaatccgagacatcctgaaagatgaa
gagacactgacactatttctcaagaaaaacattggcctgtctgactcagttgcctatctt
ctggtcaactcccaagttcgtatggaacagtttgcttatggagtcccagacttggaactg
aaagacattgcctgcagcgaggccctgttgcaacgcttcatcatcttcagccagcgttgg
ggggcacaggcggtacgcggtgccctgtgtcccctctcccaggtcaccctacagtggata
gaagacactctgtatgccgacgtggacttcttcaaactcttccgtgtgctccccacactc
cttgacagcagctctcaaggaatcaacttgagattttggggagaaatactgtctgatctg
tcaccaagagtgcaaaagtttatccatcggccaagtgttcaagacttgctgtgggtaacc
agacctcttctgcagaacagtggtcccgagaccttcacacagttgatgggcatcctgtct
gacctcctgtgtgggtacccagagggaggaggctctcgagtgttctccttcaactggtat
gaagacaataactataaggccttcctggggattgattccacaaggagagaccccacctat
tcttatgacaaaagaacaacctggagggcaacaaagccattgctgatgggaaaaatcctc
tttactccagattcccctgctgctcgaaggctgctgaagaacgccaactcaacttttgaa
gaactggatcgagttaggaagctggtcaaagcctgggaggaagtagggccccagatttgg
tacttctttgagaagagcacacagatggccgtgatcagagataccctgcagcacccaaca
gtaaaagacttcataaataggcagcttggagaagaaggcattaccactgaagccatatta
aatttcttccctaatggtccccgagagaaccaagctgatgacatgaccagctttgactgg
agggatatattcaacatcactgaccgcttcctgcgcctggctaatcaatacctggagtgt
ctggtcctggataagtttgaaagttacgatgatgaagttcagctcacccagcgagccctg
tctctcctggaggagaacaggttctgggctggagtggtattccctgacatgtatccgtgg
accagctccctacctccccatgtgaagtacaagattcggatggacattgatgtggtggag
aagaccaataagatcaaagacaggtactgggattctggtcccagggcagatcctgtcgaa
gatttccggtacatctggggaggctttgcctatctacaggacatggttgagcaaggaatc
gtgaggagtcagaccccggcagagcctccaattggagtctatctccagcagatgccttac
ccctgctttgtggatgactccttcatgatcatcctgaatcgctgtttccccatcttcatg
gtgctggcatggatctactctgtctccatgactgttaagggcattgtcttggaaaaggag
ctgaggctgaaggagaccttgaagaaccaaggtgtctctaacgctgtgatttggtgtact
tggttcctggacagcttctccattatgtcaatgagtatcttcctcctgacgctgttcatc
atgcacgggagaattctccattacagcgatcccttcattctcttcctgttcctattggcc
tttgccaccgcgaccatcatgcagtgcttcctgttcagtactttcttttccaaggccagc
ctcgccgcagcctgcagcggggtcatctacttcaccctctacctgccacacattctgtgc
tttgcgtggcaagaccggatgaccgccgacctgaagaccactgtgagcctgctttctccg
gtggcatttgggtttggcaccgagtacctggtccgctttgaagagcaaggcctgggactg
cagtggagcaacattgggaagagtcccctggaaggggatgagttcagtttcctgttgtct
atgaagatgatgctcctcgatgctgctctgtacggcttgcttgcttggtatcttgaccag
gttttcccaggagactatggcaccccacttccctggtacttccttctacaggagtcttac
tggcttggaggtgaaggttgttcgaccagagaagaaagggcactggaaaagactgaaccc
ttaacagaggaaatagaggatccggagtacccagaagactccttttttgaacgtgagctt
ccagggttggtgcctggagtgtgtgtgaagaacctggtgaaggtgtttgagcccggtagc
cggccagccgtggaccgccttaacatcactttctatgagaaccaaatcactgcattcctg
ggtcacaatggagccggaaaaaccaccaccttgtccatcctcacgggtctgttgccgcca
acatcaggaactgtgcttattgggggaaaagacattgaaatcagcctggatgcagtacgc
cagagcctgggcatgtgtccccaacacaacatcctgttccatcacctcacggtggctgag
catatcttgttctatgcccagctgaaagggaggtcctgggaggaggcccggcttgagatg
gaagccatgttagaagacacgggccttcaccacaagagaaacgaagaagctcaggacctt
tcagggggcatgcagaggaagctgtctgttgccattgcttttgtgggagattccaaggtg
gtggtcctggatgagcccacctctggggtggacccttactctagacgctccatctgggac
ctgctcctgaagtatcgctcaggtagaaccatcatcatgtccactcaccacatggatgag
gcagacctccttggtgaccgcattgccatcatttctcagggaaggctctactgctctggg
acgccactcttcctgaagaactgctttggcacaggcttctacttgaccttagttcgcaag
atgaaaaacatccagagccaaagatgtggctgtgagggggcctgcagctgtacatcaaag
ggtttctctgccaggtgtccagcccgagtcgatgagataacggaagaacaagtcttggat
ggggatgtgaaggagctgacagatttggtgtaccaccatgttccagaggcaaagctggtg
gaatgcattggccaagaacttatcttcctcctcccaaacaagaatttcaagcagagagca
tatgccagcctcttccgagagctggaggagactctggctgacctggggctcagcagcttt
ggaatttctgacactcccctggaagagattttcctgaaggtcacggaggattctgaatca
ggttctaagtttgtaggtggcacacagcagaagagagagcatactggtcttcggcatcct
tgttcggctcccgtcgagaagcacaggcagcatgcccaggcctcacatacctgttcccca
ggacaagtggatcctcccaagggccagccttccccagagccagaggaccccggtatccca
ttcaacacaggtgctcggctgatccttcagcatgtgcaggcactgctggtcaagcgattc
catcatgctgtccgcagccgcaaggattttgtggctcagattgttctccctgccactttt
gtgttcttggctctgatgctttccatcatcgtgcctccgtttggtgaattcccagctttg
acccttcacccctggatgtatgggcatcaatttaccttcttcagcatggatgaacccaac
aatgaacaccttgaagtactggcagatgtccttttgaacaggccaggttttggcaaccgt
tgtctaaaggaagagtggcttccggagtacccctgcggcaacgcaacctcctggaagacg
ccttccgtgtccccaaacatcacccacctgttccagaagcagaaatggacagcagcccac
ccttcgcccgcctgcaagtgcagcaccagagagaagctcatcatgctccccgaatgcccc
gagggtgctggggggctcccacccccacagaggatacagcgcagcacagaagtcctacaa
gacctcacgaacaggaacatctctgactacttggtaaaaacgtatcctgctctcatacga
agcagcttaaagagcaaattctgggtcaatgaacagaggtatggaggaatttccattgga
gggaagctccctgacatccccatcagcggggaagcacttgtgggcttcttaagtgacctg
ggccagatgatgaatgtgagcgggggtcctgtcaccagagagtcttccagagagatgtta
gatttcctcaaacacctcgaaaccaaagacaacattaaggtgtggtttaacaacaagggc
tggcatgccctggtcagcttcctgaacgtggctcacaacgccatcttgcgggccagcctg
cccaaggacagggacccggaagaatatggaatcaccgttatcagccagcctctgaacctg
accaaggagcagctctcagagatcacagtgctgactacttccatcgatgccgtggttgcc
atatgtgtgattttcgccatgtccttcgttccagccagctttgtcctctacctgatccag
gagagagtgacgaaagccaaacatttgcagtttatcagtggtgtgagccccaccacctac
tggatgaccaacttcctctgggacattatgaattatgctgtgagtgcgggactagtggtg
ggtatcttcattggatttcaaaagaaagcctacacatccacagacaaccttcctgcgctt
gtcactctgctcatgctgtatggatgggcagtcatcccaatgatgtatccagcgtccttc
ctgtttgacgtccccagcacagcctatgtggctttgtcttgtgctaacctgttcatcggc
atcaacagcagcgcaatcacatttgtcctggaactatttgagaataaccggatgctgctc
aggttcagtgccacgctgagggagttgctcattgtcttcccacacttctgcctgggcagg
ggcctcatcgacctggcactcagccaagctgtgacagacatctacgcccagtttggtgag
gagtactctgcaaacccattccagtgggacctgattgggaagaacctggttgctatggca
atagaaggggtggtgtacttccttctgaccctgctcatccaacaccactttttcctcacc
cggtggatcgctgagcctgctagagagcccgtttttgatgaagatgatgatgtggctgaa
gaaaggcaaagagttatgagtggaggaagtaaaagtgacatcttaaagctaaacgaacta
accaaggtttactcaggctcctccagtccagcagtagatcggttatgtgtcggcgtccac
cctggggagtgctttggcctcctgggagtgaatggtgcaggcaaaaccaccacattcaag
atgctcactggggacaccacagtgacatcaggggatgctaccatagcaggcaagagcatt
ttaactaatatttctgatgttcatcaaaacatgggctactgtcctcaattcgatgcaatt
gatgacctactcacaggccgggaacatctctacctctatgccaggctgcggggtgtgcca
tcgaaggaaattgagaaggttgccaactggggcatccaaagcctgggcttgtctctctac
gctgaccgcctagcgggcacctacagtggaggcaataagaggaaactctccacggccata
gcactcaccggctgcccgcccctgctgctgctggatgagcccacaacagggatggatcca
caggcccgccgcatgctgtggaataccattgtgaacatcatcagacaagggagagccgtg
gtgctcacctcccacagcatggaagagtgtgaagcactgtgcacgaggctggccatcatg
gtgaagggcacctttcagtgcatgggcaccattcaacacctcaagtacaagtttggagac
ggctacattgtcacaatgaaaatcaaatccccaaaggacgacttgcttcctgatttgaat
cctgtggagcagttcttccagggcaactttcctggcagcgtgcagagggagagacaccac
agcatgctccagttccaggtcccctcgtcctccctggccaggatcttccagctgctcatt
tcccacaaggacagcctgctcatcgaggagtactcagttacccagaccacactggaccag
gtatttgtaaacttcgccaaacagcagactgagacctatgacctccctctgcaccctcgg
gctgccggagccagctggcaagccaagctggaagggaaatccggacggctagagacacag
gagcctttacccgctggatcatctgaacacctggctaacataaacaaccccactgcagta
gcagataataagcacacgaggagtccgcagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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